RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 XDHP47989 1333 aa11.26□□□□□ -0.61
SPG11-207ENST00000558138 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
SPG11-207ENST00000558138 PLIN1O60240 522 aa11.25□□□□□ -0.61
SPG11-207ENST00000558138 DDNO94850 711 aaPredicted RBP11.25□□□□□ -0.61
SPG11-207ENST00000558138 CSF1RP07333 972 aa11.25□□□□□ -0.61
SPG11-207ENST00000558138 ATP2B4P23634 1241 aa11.25□□□□□ -0.61
SPG11-207ENST00000558138 EPHA10Q5JZY3 1008 aa11.25□□□□□ -0.61
SPG11-207ENST00000558138 ITPRIPQ8IWB1 547 aa11.25□□□□□ -0.61
SPG11-207ENST00000558138 GPR101Q96P66 508 aaPredicted RBP11.25□□□□□ -0.61
SPG11-207ENST00000558138 ANKRD2Q9GZV1 360 aa11.25□□□□□ -0.61
SPG11-207ENST00000558138 VPS33BQ9H267 617 aa11.25□□□□□ -0.61
SPG11-207ENST00000558138 COL4A1P02462 1669 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 LRRC37AA6NMS7 1700 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 GNAI3P08754 354 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 LMOD1P29536 600 aaPredicted RBP11.24□□□□□ -0.61
SPG11-207ENST00000558138 LDHAL6AQ6ZMR3 332 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 DZIP1LQ8IYY4 767 aaKnown RBP11.24□□□□□ -0.61
SPG11-207ENST00000558138 TBC1D16Q8TBP0 767 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 ZNF594Q96JF6 807 aaPredicted RBP11.24□□□□□ -0.61
SPG11-207ENST00000558138 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
SPG11-207ENST00000558138 USP44Q9H0E7 712 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 DBNDD1Q9H9R9 158 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 POLLQ9UGP5 575 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 MINPP1Q9UNW1 487 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 UTYO14607 1347 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 ZNF541Q9H0D2 1346 aa11.24□□□□□ -0.61
SPG11-207ENST00000558138 IQCA1LA6NCM1 817 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 MS4A1P11836 297 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 CHRNDQ07001 517 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 TMEM57Q8N5G2 664 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.23□□□□□ -0.61
SPG11-207ENST00000558138 ZNRF3Q9ULT6 936 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 LRRFIP2Q9Y608 721 aaKnown RBP11.23□□□□□ -0.61
SPG11-207ENST00000558138 SNED1Q8TER0 1413 aa11.23□□□□□ -0.61
SPG11-207ENST00000558138 FZD9O00144 591 aa11.22□□□□□ -0.61
SPG11-207ENST00000558138 ECE2O60344 883 aa11.22□□□□□ -0.61
SPG11-207ENST00000558138 RAD17O75943 681 aa11.22□□□□□ -0.61
SPG11-207ENST00000558138 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
SPG11-207ENST00000558138 TNIP1Q15025 636 aa11.22□□□□□ -0.61
SPG11-207ENST00000558138 INTS3Q68E01 1043 aaKnown RBP11.22□□□□□ -0.61
SPG11-207ENST00000558138 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
SPG11-207ENST00000558138 HELBQ8NG08 1087 aaPredicted RBP11.22□□□□□ -0.61
SPG11-207ENST00000558138 MEIS3Q99687 375 aa11.22□□□□□ -0.61
SPG11-207ENST00000558138 PODXL2Q9NZ53 605 aa11.22□□□□□ -0.61
SPG11-207ENST00000558138 LEMD3Q9Y2U8 911 aa11.22□□□□□ -0.61
SPG11-207ENST00000558138 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.61
SPG11-207ENST00000558138 TAF5LO75529 589 aa11.21□□□□□ -0.61
SPG11-207ENST00000558138 EAPPQ56P03 285 aaPredicted RBP11.21□□□□□ -0.61
SPG11-207ENST00000558138 METTL24Q5JXM2 366 aa11.21□□□□□ -0.61
SPG11-207ENST00000558138 GPC2Q8N158 579 aa11.21□□□□□ -0.61
SPG11-207ENST00000558138 ANKRD44Q8N8A2 993 aa11.21□□□□□ -0.61
SPG11-207ENST00000558138 HACL1Q9UJ83 578 aa11.21□□□□□ -0.61
SPG11-207ENST00000558138 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
SPG11-207ENST00000558138 DUOX1Q9NRD9 1551 aa11.2□□□□□ -0.62
SPG11-207ENST00000558138 KIF3CO14782 793 aa11.2□□□□□ -0.62
SPG11-207ENST00000558138 GNAI2P04899 355 aa11.2□□□□□ -0.62
SPG11-207ENST00000558138 RABL6Q3YEC7 729 aaPredicted RBP11.2□□□□□ -0.62
SPG11-207ENST00000558138 KAZALD1Q96I82 304 aa11.2□□□□□ -0.62
SPG11-207ENST00000558138 SIL1Q9H173 461 aa11.2□□□□□ -0.62
SPG11-207ENST00000558138 COL4A5P29400 1685 aa11.2□□□□□ -0.62
SPG11-207ENST00000558138 MED23Q9ULK4 1368 aa11.19□□□□□ -0.62
SPG11-207ENST00000558138 MROH5Q6ZUA9 1318 aa11.19□□□□□ -0.62
SPG11-207ENST00000558138 TOMM70O94826 608 aa11.19□□□□□ -0.62
SPG11-207ENST00000558138 C1QTNF8P60827 252 aa11.19□□□□□ -0.62
SPG11-207ENST00000558138 VPS37DQ86XT2 251 aa11.19□□□□□ -0.62
SPG11-207ENST00000558138 KLHDC4Q8TBB5 520 aa11.19□□□□□ -0.62
SPG11-207ENST00000558138 PANK1Q8TE04 598 aa11.19□□□□□ -0.62
SPG11-207ENST00000558138 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
SPG11-207ENST00000558138 SRGAP3O43295 1099 aa11.18□□□□□ -0.62
SPG11-207ENST00000558138 EPHX2P34913 555 aa11.18□□□□□ -0.62
SPG11-207ENST00000558138 GMPSP49915 693 aaPredicted RBP11.18□□□□□ -0.62
SPG11-207ENST00000558138 CXCL9Q07325 125 aa11.18□□□□□ -0.62
SPG11-207ENST00000558138 LRRC24Q50LG9 513 aa11.18□□□□□ -0.62
SPG11-207ENST00000558138 ZNF804AQ7Z570 1209 aa11.18□□□□□ -0.62
SPG11-207ENST00000558138 PUS3Q9BZE2 481 aaKnown RBP11.18□□□□□ -0.62
SPG11-207ENST00000558138 C1orf115Q9H7X2 142 aa11.18□□□□□ -0.62
SPG11-207ENST00000558138 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
SPG11-207ENST00000558138 YDJCA8MPS7 323 aa11.17□□□□□ -0.62
SPG11-207ENST00000558138 PSMD14O00487 310 aa11.17□□□□□ -0.62
SPG11-207ENST00000558138 FRAT2O75474 233 aaPredicted RBP11.17□□□□□ -0.62
SPG11-207ENST00000558138 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
SPG11-207ENST00000558138 SMC1BQ8NDV3 1235 aa11.17□□□□□ -0.62
SPG11-207ENST00000558138 L3MBTL3Q96JM7 780 aaPredicted RBP11.17□□□□□ -0.62
SPG11-207ENST00000558138 COA1Q9GZY4 146 aa11.17□□□□□ -0.62
SPG11-207ENST00000558138 USP17L3A6NCW0 530 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 USP17L4A6NCW7 530 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 WTIPA6NIX2 430 aaPredicted RBP11.16□□□□□ -0.62
SPG11-207ENST00000558138 H7C1D1 291 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 SNAP23O00161 211 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 EYA2O00167 538 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
SPG11-207ENST00000558138 RLBP1P12271 317 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 KLRK1P26718 216 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 CAVIN4Q5BKX8 364 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 USP17L1Q7RTZ2 530 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms