RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 ZBTB43O43298 467 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 GBP2P32456 591 aaPredicted RBP15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 RGS22Q8NE09 1264 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 NUP88Q99567 741 aaPredicted RBP15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 KRT23Q9C075 422 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 NUP153P49790 1475 aaKnown RBP15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 AFMP43652 599 aa15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 ZNF594Q96JF6 807 aaPredicted RBP15.76■□□□□ 0.11
SEMA6D-208ENST00000558014 RTN1Q16799 776 aa15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 MYCP01106 439 aaPredicted RBP15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 ITGA6P23229 1130 aa15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 BICC1Q9H694 974 aaKnown RBP15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 PPIP5K2O43314 1243 aa15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 CCDC112Q8NEF3 446 aa15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 CCDC113Q9H0I3 377 aa15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 HOMER2Q9NSB8 354 aa15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 CETN1Q12798 172 aa15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 NIM1KQ8IY84 436 aa15.75■□□□□ 0.11
SEMA6D-208ENST00000558014 HSP90AA4PQ58FG1 418 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 NSD2O96028 1365 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 TSPYL6Q8N831 410 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 EIF4G3O43432 1585 aaKnown RBP15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 HMGN5P82970 282 aaKnown RBP15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 PHACTR3Q96KR7 559 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 HARSP12081 509 aaKnown RBP15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 IVNS1ABPQ9Y6Y0 642 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 DNAJC10Q8IXB1 793 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 LGR6Q9HBX8 967 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
SEMA6D-208ENST00000558014 KCNQ4P56696 695 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 AMPD3Q01432 767 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 PRPF4BQ13523 1007 aaKnown RBP15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 ZRSR2Q15696 482 aaKnown RBP15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 PLIN2Q99541 437 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 TSPYL1Q9H0U9 437 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 SH2B1Q9NRF2 756 aaPredicted RBP15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 ABCC1P33527 1531 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 VPS36Q86VN1 386 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 FCHSD1Q86WN1 690 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 KLHDC4Q8TBB5 520 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 RXRBP28702 533 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 H0YHG0 523 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 HIBADHP31937 336 aaKnown RBP15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 ERMNQ8TAM6 284 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 BACH2Q9BYV9 841 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 GSTTP1A0A1W2PQM5 241 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 STXBP4Q6ZWJ1 553 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 CPXCR1Q8N123 301 aa15.73■□□□□ 0.11
SEMA6D-208ENST00000558014 TCIRG1Q13488 830 aa15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 ALG1Q9BT22 464 aa15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 GPHNQ9NQX3 736 aaPredicted RBP15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 UGGT2Q9NYU1 1516 aa15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 NCBP1Q09161 790 aaKnown RBP15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 CDCA7Q9BWT1 371 aaPredicted RBP15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 TBC1D9Q6ZT07 1266 aa15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 C6orf50Q9HD87 102 aa15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 RFX1P22670 979 aa15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 MCMDC2Q4G0Z9 681 aa15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 RRP36Q96EU6 259 aaKnown RBP15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 TBX22Q9Y458 520 aa15.72■□□□□ 0.11
SEMA6D-208ENST00000558014 CHMP2AO43633 222 aa15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 PLCG2P16885 1265 aa15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 ZNF790Q6PG37 636 aa15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 STX6O43752 255 aa15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 FGFR1OPO95684 399 aaKnown RBP15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 TIMM10P62072 90 aa15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 NMIQ13287 307 aaPredicted RBP15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 TMCO5BA8MYB1 307 aa15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
SEMA6D-208ENST00000558014 B4DLN1 442 aa15.71■□□□□ 0.1
SEMA6D-208ENST00000558014 MRPL12P52815 198 aaKnown RBP15.71■□□□□ 0.1
SEMA6D-208ENST00000558014 SMCR8Q8TEV9 937 aaPredicted RBP15.71■□□□□ 0.1
SEMA6D-208ENST00000558014 PTPDC1A2A3K4 754 aa15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 MBD4O95243 580 aa15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 MYCLP12524 364 aaPredicted RBP15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 Q6ZUG5 572 aa15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 GJC1P36383 396 aa15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 DPY19L2Q6NUT2 758 aa15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 AATFQ9NY61 560 aaKnown RBP eCLIP15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 ALDH1L1O75891 902 aa15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 YTHDC2Q9H6S0 1430 aaKnown RBP15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 LINS1Q8NG48 757 aa15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 RBM8AQ9Y5S9 174 aaKnown RBP15.7■□□□□ 0.1
SEMA6D-208ENST00000558014 ZFYP08048 801 aaPredicted RBP15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 NOP2P46087 812 aaKnown RBP15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 DUOX2Q9NRD8 1548 aa15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 SH3TC1Q8TE82 1336 aa15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 SORBS3O60504 671 aa15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 MARCKSP29966 332 aaPredicted RBP15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 STAT6P42226 847 aa15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 DOK7Q18PE1 504 aa15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 TERF1P54274 439 aa15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 PAGR1Q9BTK6 254 aa15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 CNNM2Q9H8M5 875 aa15.69■□□□□ 0.1
SEMA6D-208ENST00000558014 H7C1D1 291 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms