RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 SETBP1Q9Y6X0 1596 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 CSB-PGBD3P0DP91 1061 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 CDCA8Q53HL2 280 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 SIX5Q8N196 739 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 PGBD3Q8N328 593 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 ZSCAN1Q8NBB4 408 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 IQSEC3Q9UPP2 1182 aaPredicted RBP8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 AMOTL2Q9Y2J4 779 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 PARP3Q9Y6F1 533 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 PIK3R4Q99570 1358 aa8.2□□□□□ -1.1
HNRNPC-233ENST00000557768 CLTCL1P53675 1640 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 SFI1A8K8P3 1242 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L15C9J2P7 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L10C9JJH3 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L13C9JLJ4 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L12C9JPN9 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L11C9JVI0 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L21D6R901 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L18D6R9N7 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L22D6RA61 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L17D6RBQ6 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L19D6RCP7 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L20D6RJB6 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 ITGAEP38570 1179 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 MFAP1P55081 439 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 USP17L24Q0WX57 530 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 PTK7Q13308 1070 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 ZNF772Q68DY9 489 aaPredicted RBP8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 LARP1Q6PKG0 1096 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 BRINP3Q76B58 766 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 VRTNQ9H8Y1 702 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 SCHIP1Q9P0W5 487 aaPredicted RBP8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 NUP155O75694 1391 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 ROCK1Q13464 1354 aa8.19□□□□□ -1.1
HNRNPC-233ENST00000557768 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.18□□□□□ -1.1
HNRNPC-233ENST00000557768 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-233ENST00000557768 SLC9A9Q8IVB4 645 aa8.18□□□□□ -1.1
HNRNPC-233ENST00000557768 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
HNRNPC-233ENST00000557768 MTMR7Q9Y216 660 aa8.18□□□□□ -1.1
HNRNPC-233ENST00000557768 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 RXRBP28702 533 aa8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 EPHA4P54764 986 aa8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 SRPK2P78362 688 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 GAS6Q14393 721 aa8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 TSEN2Q8NCE0 465 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 MST1RQ04912 1400 aa8.17□□□□□ -1.1
HNRNPC-233ENST00000557768 THBS1P07996 1170 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 METP08581 1390 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 DCCP43146 1447 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 AFF2P51816 1311 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 NBPF1Q3BBV0 1214 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 ZNF326Q5BKZ1 582 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 ARSJQ5FYB0 599 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 EFHC2Q5JST6 749 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 NEXMIFQ5QGS0 1516 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 ZNF295-AS1Q8N0V1 137 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 DDX17Q92841 729 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 STK17AQ9UEE5 414 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 ZNF232Q9UNY5 417 aa8.16□□□□□ -1.1
HNRNPC-233ENST00000557768 CDK12Q9NYV4 1490 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 SETD5Q9C0A6 1442 aa8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 ATP4AP20648 1035 aa8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 SEC13P55735 322 aa8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 FOXK2Q01167 660 aa8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 DPYDQ12882 1025 aa8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 L3MBTL2Q969R5 705 aa8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 TSPAN10Q9H1Z9 355 aaPredicted RBP8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 USTQ9Y2C2 406 aa8.15□□□□□ -1.1
HNRNPC-233ENST00000557768 MARF1Q9Y4F3 1742 aaKnown RBP8.15□□□□□ -1.11
HNRNPC-233ENST00000557768 LAMC1P11047 1609 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 ADGRL3Q9HAR2 1447 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 LGR5O75473 907 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 BRD1O95696 1058 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 TATP17735 454 aaPredicted RBP8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 KCNA1Q09470 495 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 C1orf216Q8TAB5 229 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 ZDHHC1Q8WTX9 485 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 C8orf37Q96NL8 207 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 HINFPQ9BQA5 517 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 PPLO60437 1756 aa8.14□□□□□ -1.11
HNRNPC-233ENST00000557768 RGS12O14924 1447 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 PNPLA6Q8IY17 1366 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 M0R2N6 131 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 NOS2P35228 1153 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 TXLNAP40222 546 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 TEAD4Q15561 434 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 SH3PXD2AQ5TCZ1 1133 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 LRRC59Q96AG4 307 aaKnown RBP8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 CRISPLD1Q9H336 500 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
HNRNPC-233ENST00000557768 A0A1W2PNR3 127 aa8.12□□□□□ -1.11
HNRNPC-233ENST00000557768 SERTM1A2A2V5 107 aa8.12□□□□□ -1.11
HNRNPC-233ENST00000557768 FAM181BA6NEQ2 426 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms