RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 DDX58O95786 925 aaKnown RBP16.26■□□□□ 0.19
APEX1-213ENST00000556296 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
APEX1-213ENST00000556296 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
APEX1-213ENST00000556296 FMR1Q06787 632 aaKnown RBP eCLIP16.26■□□□□ 0.19
APEX1-213ENST00000556296 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
APEX1-213ENST00000556296 ZC3H12CQ9C0D7 883 aaKnown RBP16.26■□□□□ 0.19
APEX1-213ENST00000556296 RIMBP2O15034 1052 aa16.25■□□□□ 0.19
APEX1-213ENST00000556296 TWISTNBQ3B726 338 aaPredicted RBP16.25■□□□□ 0.19
APEX1-213ENST00000556296 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
APEX1-213ENST00000556296 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
APEX1-213ENST00000556296 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
APEX1-213ENST00000556296 DCPSQ96C86 337 aaKnown RBP16.25■□□□□ 0.19
APEX1-213ENST00000556296 BRPF1P55201 1214 aaPredicted RBP16.24■□□□□ 0.19
APEX1-213ENST00000556296 NOGQ13253 232 aa16.24■□□□□ 0.19
APEX1-213ENST00000556296 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
APEX1-213ENST00000556296 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
APEX1-213ENST00000556296 ABHD8Q96I13 439 aa16.24■□□□□ 0.19
APEX1-213ENST00000556296 ANKIB1Q9P2G1 1089 aa16.24■□□□□ 0.19
APEX1-213ENST00000556296 DUOX1Q9NRD9 1551 aa16.24■□□□□ 0.19
APEX1-213ENST00000556296 YDJCA8MPS7 323 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 ELL2O00472 640 aaPredicted RBP16.23■□□□□ 0.19
APEX1-213ENST00000556296 PSMD14O00487 310 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 HIRAP54198 1017 aaPredicted RBP16.23■□□□□ 0.19
APEX1-213ENST00000556296 GPSM2P81274 684 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 C2orf69Q8N8R5 385 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 ZNF428Q96B54 188 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
APEX1-213ENST00000556296 DBNDD1Q9H9R9 158 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 COL4A1P02462 1669 aa16.23■□□□□ 0.19
APEX1-213ENST00000556296 ECE2O60344 883 aa16.22■□□□□ 0.19
APEX1-213ENST00000556296 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
APEX1-213ENST00000556296 KRT26Q7Z3Y9 468 aa16.22■□□□□ 0.19
APEX1-213ENST00000556296 TSPYL6Q8N831 410 aa16.22■□□□□ 0.19
APEX1-213ENST00000556296 CCDC191Q8NCU4 936 aa16.22■□□□□ 0.19
APEX1-213ENST00000556296 TBC1D16Q8TBP0 767 aa16.22■□□□□ 0.19
APEX1-213ENST00000556296 POLLQ9UGP5 575 aa16.22■□□□□ 0.19
APEX1-213ENST00000556296 GGA1Q9UJY5 639 aa16.22■□□□□ 0.19
APEX1-213ENST00000556296 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
APEX1-213ENST00000556296 AOC2O75106 756 aa16.21■□□□□ 0.19
APEX1-213ENST00000556296 HUNKP57058 714 aa16.21■□□□□ 0.19
APEX1-213ENST00000556296 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
APEX1-213ENST00000556296 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
APEX1-213ENST00000556296 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
APEX1-213ENST00000556296 MYD88Q99836 296 aa16.21■□□□□ 0.19
APEX1-213ENST00000556296 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
APEX1-213ENST00000556296 PODXL2Q9NZ53 605 aa16.21■□□□□ 0.19
APEX1-213ENST00000556296 PDE8AO60658 829 aa16.2■□□□□ 0.18
APEX1-213ENST00000556296 VAMP4O75379 141 aa16.2■□□□□ 0.18
APEX1-213ENST00000556296 UFL1O94874 794 aa16.2■□□□□ 0.18
APEX1-213ENST00000556296 DOK7Q18PE1 504 aa16.2■□□□□ 0.18
APEX1-213ENST00000556296 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
APEX1-213ENST00000556296 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
APEX1-213ENST00000556296 SULF1Q8IWU6 871 aa16.2■□□□□ 0.18
APEX1-213ENST00000556296 CACNA1FO60840 1977 aa16.19■□□□□ 0.18
APEX1-213ENST00000556296 TRPM7Q96QT4 1865 aa16.19■□□□□ 0.18
APEX1-213ENST00000556296 PCCAP05165 728 aaPredicted RBP16.19■□□□□ 0.18
APEX1-213ENST00000556296 ANKRD18AQ8IVF6 992 aa16.19■□□□□ 0.18
APEX1-213ENST00000556296 GBA2Q9HCG7 927 aaPredicted RBP16.19■□□□□ 0.18
APEX1-213ENST00000556296 CCDC85CA6NKD9 419 aa16.18■□□□□ 0.18
APEX1-213ENST00000556296 VIL1P09327 827 aaKnown RBP16.18■□□□□ 0.18
APEX1-213ENST00000556296 NEXNQ0ZGT2 675 aa16.18■□□□□ 0.18
APEX1-213ENST00000556296 KIF4BQ2VIQ3 1234 aa16.18■□□□□ 0.18
APEX1-213ENST00000556296 RGMBQ6NW40 437 aa16.18■□□□□ 0.18
APEX1-213ENST00000556296 AGBL3Q8NEM8 1001 aa16.18■□□□□ 0.18
APEX1-213ENST00000556296 CDC5LQ99459 802 aaKnown RBP16.18■□□□□ 0.18
APEX1-213ENST00000556296 STK31Q9BXU1 1019 aa16.18■□□□□ 0.18
APEX1-213ENST00000556296 SHTN1A0MZ66 631 aa16.17■□□□□ 0.18
APEX1-213ENST00000556296 ATP2B4P23634 1241 aa16.17■□□□□ 0.18
APEX1-213ENST00000556296 METTL22Q9BUU2 404 aaPredicted RBP16.17■□□□□ 0.18
APEX1-213ENST00000556296 MYH3P11055 1940 aa16.17■□□□□ 0.18
APEX1-213ENST00000556296 ZNF157P51786 506 aaPredicted RBP16.16■□□□□ 0.18
APEX1-213ENST00000556296 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
APEX1-213ENST00000556296 SEC31BQ9NQW1 1179 aa16.16■□□□□ 0.18
APEX1-213ENST00000556296 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
APEX1-213ENST00000556296 XDHP47989 1333 aa16.16■□□□□ 0.18
APEX1-213ENST00000556296 RSBN1LQ6PCB5 846 aaPredicted RBP16.15■□□□□ 0.18
APEX1-213ENST00000556296 PODNQ7Z5L7 613 aa16.15■□□□□ 0.18
APEX1-213ENST00000556296 MLLT1Q03111 559 aaPredicted RBP16.14■□□□□ 0.17
APEX1-213ENST00000556296 ALDH1L2Q3SY69 923 aa16.14■□□□□ 0.17
APEX1-213ENST00000556296 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
APEX1-213ENST00000556296 SAGE1Q9NXZ1 904 aa16.14■□□□□ 0.17
APEX1-213ENST00000556296 GGA3Q9NZ52 723 aa16.14■□□□□ 0.17
APEX1-213ENST00000556296 MAP3K2Q9Y2U5 619 aa16.14■□□□□ 0.17
APEX1-213ENST00000556296 SCN9AQ15858 1988 aa16.14■□□□□ 0.17
APEX1-213ENST00000556296 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 USP17L3A6NCW0 530 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 USP17L4A6NCW7 530 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 IGKV5-2P06315 115 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 USP17L8P0C7I0 530 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 MMP14P50281 582 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 ZNF280AP59817 542 aaPredicted RBP16.13■□□□□ 0.17
APEX1-213ENST00000556296 FKBP1BP68106 108 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 USP17L1Q7RTZ2 530 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 OGFOD1Q8N543 542 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 CCDC85AQ96PX6 553 aaPredicted RBP16.13■□□□□ 0.17
APEX1-213ENST00000556296 KCNQ5Q9NR82 932 aa16.13■□□□□ 0.17
APEX1-213ENST00000556296 PI4KAP2A4QPH2 592 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms