RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 SCN9AQ15858 1988 aa24.24■■□□□ 1.47
CDKN3-209ENST00000556102 RPS12P25398 132 aaKnown RBP24.24■■□□□ 1.47
CDKN3-209ENST00000556102 DOK7Q18PE1 504 aa24.24■■□□□ 1.47
CDKN3-209ENST00000556102 CCDC27Q2M243 656 aa24.24■■□□□ 1.47
CDKN3-209ENST00000556102 GPR101Q96P66 508 aaPredicted RBP24.24■■□□□ 1.47
CDKN3-209ENST00000556102 MAP3K2Q9Y2U5 619 aa24.24■■□□□ 1.47
CDKN3-209ENST00000556102 HSPA8P11142 646 aaKnown RBP24.23■■□□□ 1.47
CDKN3-209ENST00000556102 SAPCD2Q86UD0 394 aa24.23■■□□□ 1.47
CDKN3-209ENST00000556102 JARID2Q92833 1246 aaPredicted RBP24.23■■□□□ 1.47
CDKN3-209ENST00000556102 TSR2Q969E8 191 aaKnown RBP24.23■■□□□ 1.47
CDKN3-209ENST00000556102 ZC3H12CQ9C0D7 883 aaKnown RBP24.23■■□□□ 1.47
CDKN3-209ENST00000556102 RTL9Q8NET4 1388 aa24.23■■□□□ 1.47
CDKN3-209ENST00000556102 MYH3P11055 1940 aa24.22■■□□□ 1.47
CDKN3-209ENST00000556102 UFL1O94874 794 aa24.22■■□□□ 1.47
CDKN3-209ENST00000556102 GRM1Q13255 1194 aa24.22■■□□□ 1.47
CDKN3-209ENST00000556102 KSR2Q6VAB6 950 aa24.22■■□□□ 1.47
CDKN3-209ENST00000556102 KCNQ5Q9NR82 932 aa24.22■■□□□ 1.47
CDKN3-209ENST00000556102 ANKIB1Q9P2G1 1089 aa24.22■■□□□ 1.47
CDKN3-209ENST00000556102 GGA1Q9UJY5 639 aa24.22■■□□□ 1.47
CDKN3-209ENST00000556102 POLR2AP24928 1970 aaKnown RBP24.22■■□□□ 1.47
CDKN3-209ENST00000556102 SAMD7Q7Z3H4 446 aa24.21■■□□□ 1.47
CDKN3-209ENST00000556102 HHIPL1Q96JK4 782 aa24.21■■□□□ 1.47
CDKN3-209ENST00000556102 CCDC85AQ96PX6 553 aaPredicted RBP24.21■■□□□ 1.47
CDKN3-209ENST00000556102 STK31Q9BXU1 1019 aa24.21■■□□□ 1.47
CDKN3-209ENST00000556102 PI4KAP2A4QPH2 592 aa24.2■■□□□ 1.46
CDKN3-209ENST00000556102 ANKRD18AQ8IVF6 992 aa24.2■■□□□ 1.46
CDKN3-209ENST00000556102 WWC1Q8IX03 1113 aa24.2■■□□□ 1.46
CDKN3-209ENST00000556102 PI4KAP1Q8N8J0 262 aa24.2■■□□□ 1.46
CDKN3-209ENST00000556102 ZNF408Q9H9D4 720 aa24.2■■□□□ 1.46
CDKN3-209ENST00000556102 PSME4Q14997 1843 aa24.19■■□□□ 1.46
CDKN3-209ENST00000556102 IGKV5-2P06315 115 aa24.19■■□□□ 1.46
CDKN3-209ENST00000556102 MAP2K2P36507 400 aa24.19■■□□□ 1.46
CDKN3-209ENST00000556102 TBC1D10BQ4KMP7 808 aaPredicted RBP24.19■■□□□ 1.46
CDKN3-209ENST00000556102 BEGAINQ9BUH8 593 aa24.19■■□□□ 1.46
CDKN3-209ENST00000556102 XDHP47989 1333 aa24.18■■□□□ 1.46
CDKN3-209ENST00000556102 G3V3G9 751 aa24.18■■□□□ 1.46
CDKN3-209ENST00000556102 VIL1P09327 827 aaKnown RBP24.18■■□□□ 1.46
CDKN3-209ENST00000556102 CTSWP56202 376 aa24.18■■□□□ 1.46
CDKN3-209ENST00000556102 NEXNQ0ZGT2 675 aa24.18■■□□□ 1.46
CDKN3-209ENST00000556102 TWISTNBQ3B726 338 aaPredicted RBP24.18■■□□□ 1.46
CDKN3-209ENST00000556102 DCAF8Q5TAQ9 597 aa24.18■■□□□ 1.46
CDKN3-209ENST00000556102 USP48Q86UV5 1035 aa24.18■■□□□ 1.46
CDKN3-209ENST00000556102 IL16Q14005 1332 aa24.17■■□□□ 1.46
CDKN3-209ENST00000556102 AOC2O75106 756 aa24.17■■□□□ 1.46
CDKN3-209ENST00000556102 EGFRP00533 1210 aa24.17■■□□□ 1.46
CDKN3-209ENST00000556102 NCBP3Q53F19 620 aaKnown RBP24.17■■□□□ 1.46
CDKN3-209ENST00000556102 CDC5LQ99459 802 aaKnown RBP24.17■■□□□ 1.46
CDKN3-209ENST00000556102 SPEF2Q9C093 1822 aa24.16■■□□□ 1.46
CDKN3-209ENST00000556102 ZNF609O15014 1411 aa24.16■■□□□ 1.46
CDKN3-209ENST00000556102 CACNA1FO60840 1977 aa24.16■■□□□ 1.46
CDKN3-209ENST00000556102 RBM26Q5T8P6 1007 aaKnown RBP24.15■■□□□ 1.46
CDKN3-209ENST00000556102 KRT26Q7Z3Y9 468 aa24.15■■□□□ 1.46
CDKN3-209ENST00000556102 NEURL1BA8MQ27 555 aa24.14■■□□□ 1.45
CDKN3-209ENST00000556102 ATP2B4P23634 1241 aa24.14■■□□□ 1.45
CDKN3-209ENST00000556102 CWF19L2Q2TBE0 894 aaKnown RBP24.14■■□□□ 1.45
CDKN3-209ENST00000556102 KIF4BQ2VIQ3 1234 aa24.14■■□□□ 1.45
CDKN3-209ENST00000556102 G2E3Q7L622 706 aa24.14■■□□□ 1.45
CDKN3-209ENST00000556102 TTLL11Q8NHH1 800 aa24.14■■□□□ 1.45
CDKN3-209ENST00000556102 DCPSQ96C86 337 aaKnown RBP24.14■■□□□ 1.45
CDKN3-209ENST00000556102 SLC4A2P04920 1241 aa24.13■■□□□ 1.45
CDKN3-209ENST00000556102 AGBL3Q8NEM8 1001 aa24.13■■□□□ 1.45
CDKN3-209ENST00000556102 RSBN1LQ6PCB5 846 aaPredicted RBP24.12■■□□□ 1.45
CDKN3-209ENST00000556102 DLK2Q6UY11 383 aa24.12■■□□□ 1.45
CDKN3-209ENST00000556102 GREM2Q9H772 168 aa24.12■■□□□ 1.45
CDKN3-209ENST00000556102 MRS2Q9HD23 443 aa24.12■■□□□ 1.45
CDKN3-209ENST00000556102 BSDC1Q9NW68 430 aaPredicted RBP24.12■■□□□ 1.45
CDKN3-209ENST00000556102 ADM5C9JUS6 153 aa24.11■■□□□ 1.45
CDKN3-209ENST00000556102 H7C1W4 665 aa24.11■■□□□ 1.45
CDKN3-209ENST00000556102 BRPF1P55201 1214 aaPredicted RBP24.11■■□□□ 1.45
CDKN3-209ENST00000556102 HUNKP57058 714 aa24.11■■□□□ 1.45
CDKN3-209ENST00000556102 CA12O43570 354 aa24.1■■□□□ 1.45
CDKN3-209ENST00000556102 ZNF280AP59817 542 aaPredicted RBP24.1■■□□□ 1.45
CDKN3-209ENST00000556102 FLIIQ13045 1269 aa24.1■■□□□ 1.45
CDKN3-209ENST00000556102 UBE3BQ7Z3V4 1068 aa24.1■■□□□ 1.45
CDKN3-209ENST00000556102 PODNQ7Z5L7 613 aa24.1■■□□□ 1.45
CDKN3-209ENST00000556102 GBA2Q9HCG7 927 aaPredicted RBP24.1■■□□□ 1.45
CDKN3-209ENST00000556102 GGA3Q9NZ52 723 aa24.1■■□□□ 1.45
CDKN3-209ENST00000556102 FANCIQ9NVI1 1328 aa24.1■■□□□ 1.45
CDKN3-209ENST00000556102 MED23Q9ULK4 1368 aa24.09■■□□□ 1.45
CDKN3-209ENST00000556102 NOGQ13253 232 aa24.09■■□□□ 1.45
CDKN3-209ENST00000556102 MINPP1Q9UNW1 487 aa24.09■■□□□ 1.45
CDKN3-209ENST00000556102 SULF1Q8IWU6 871 aa24.08■■□□□ 1.45
CDKN3-209ENST00000556102 C2orf69Q8N8R5 385 aa24.08■■□□□ 1.45
CDKN3-209ENST00000556102 GMLQ99445 158 aa24.08■■□□□ 1.45
CDKN3-209ENST00000556102 PLA2G12BQ9BX93 195 aa24.08■■□□□ 1.45
CDKN3-209ENST00000556102 USP17L3A6NCW0 530 aa24.07■■□□□ 1.44
CDKN3-209ENST00000556102 USP17L4A6NCW7 530 aa24.07■■□□□ 1.44
CDKN3-209ENST00000556102 FKBP5Q13451 457 aaPredicted RBP24.07■■□□□ 1.44
CDKN3-209ENST00000556102 GCKRQ14397 625 aa24.07■■□□□ 1.44
CDKN3-209ENST00000556102 USP17L1Q7RTZ2 530 aa24.07■■□□□ 1.44
CDKN3-209ENST00000556102 TSKSQ9UJT2 592 aa24.07■■□□□ 1.44
CDKN3-209ENST00000556102 ASTN2O75129 1339 aaPredicted RBP24.07■■□□□ 1.44
CDKN3-209ENST00000556102 ANP32CO43423 234 aa24.06■■□□□ 1.44
CDKN3-209ENST00000556102 CCT4P50991 539 aaKnown RBP24.06■■□□□ 1.44
CDKN3-209ENST00000556102 WDR63Q8IWG1 891 aa24.06■■□□□ 1.44
CDKN3-209ENST00000556102 DNAAF4Q8WXU2 420 aa24.06■■□□□ 1.44
CDKN3-209ENST00000556102 MYH16Q9H6N6 1097 aa24.06■■□□□ 1.44
CDKN3-209ENST00000556102 ZNF646O15015 1829 aaPredicted RBP24.05■■□□□ 1.44
CDKN3-209ENST00000556102 WTIPA6NIX2 430 aaPredicted RBP24.05■■□□□ 1.44
CDKN3-209ENST00000556102 USP17L8P0C7I0 530 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms