RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 DPF2Q92785 391 aa12.22□□□□□ -0.45
SRP54-AS1-201ENST00000554945 FAM89AQ96GI7 184 aa12.22□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
SRP54-AS1-201ENST00000554945 GLIS2Q9BZE0 524 aaPredicted RBP12.22□□□□□ -0.45
SRP54-AS1-201ENST00000554945 DUOX1Q9NRD9 1551 aa12.22□□□□□ -0.45
SRP54-AS1-201ENST00000554945 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CA12O43570 354 aa12.21□□□□□ -0.45
SRP54-AS1-201ENST00000554945 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
SRP54-AS1-201ENST00000554945 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.45
SRP54-AS1-201ENST00000554945 ABHD8Q96I13 439 aa12.21□□□□□ -0.45
SRP54-AS1-201ENST00000554945 NSFL1CQ9UNZ2 370 aaKnown RBP12.21□□□□□ -0.45
SRP54-AS1-201ENST00000554945 AOC2O75106 756 aa12.2□□□□□ -0.46
SRP54-AS1-201ENST00000554945 HSP90B1P14625 803 aaKnown RBP12.2□□□□□ -0.46
SRP54-AS1-201ENST00000554945 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
SRP54-AS1-201ENST00000554945 TRPM4Q8TD43 1214 aa12.2□□□□□ -0.46
SRP54-AS1-201ENST00000554945 CELF1Q92879 486 aaKnown RBP12.2□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ZNF428Q96B54 188 aa12.2□□□□□ -0.46
SRP54-AS1-201ENST00000554945 EYA3Q99504 573 aa12.2□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
SRP54-AS1-201ENST00000554945 POLR2AP24928 1970 aaKnown RBP12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 PSMD14O00487 310 aa12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 RIMBP2O15034 1052 aa12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 RIC3Q7Z5B4 369 aa12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 DBNDD1Q9H9R9 158 aa12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
SRP54-AS1-201ENST00000554945 SHTN1A0MZ66 631 aa12.18□□□□□ -0.46
SRP54-AS1-201ENST00000554945 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
SRP54-AS1-201ENST00000554945 GPSM2P81274 684 aa12.18□□□□□ -0.46
SRP54-AS1-201ENST00000554945 RTL5Q5HYW3 569 aaPredicted RBP12.18□□□□□ -0.46
SRP54-AS1-201ENST00000554945 USP48Q86UV5 1035 aa12.18□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
SRP54-AS1-201ENST00000554945 MBIPQ9NS73 344 aa12.18□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ECE2O60344 883 aa12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 CALD1Q05682 793 aaKnown RBP12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 NOGQ13253 232 aa12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 SAMD7Q7Z3H4 446 aa12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ZNF579Q8NAF0 562 aaKnown RBP12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 TBC1D16Q8TBP0 767 aa12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 DCPSQ96C86 337 aaKnown RBP12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ZC3H12CQ9C0D7 883 aaKnown RBP12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
SRP54-AS1-201ENST00000554945 HUNKP57058 714 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 GNAI1P63096 354 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 KRT26Q7Z3Y9 468 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 CHMP4AQ9BY43 222 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 PHAXQ9H814 394 aaKnown RBP12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 COL4A1P02462 1669 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 CASP8AP2Q9UKL3 1982 aa12.16□□□□□ -0.46
SRP54-AS1-201ENST00000554945 G3V3G9 751 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 PCCAP05165 728 aaPredicted RBP12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 VIL1P09327 827 aaKnown RBP12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 C2orf69Q8N8R5 385 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 MYD88Q99836 296 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 KCNQ5Q9NR82 932 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 ANKIB1Q9P2G1 1089 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 RTL9Q8NET4 1388 aa12.15□□□□□ -0.46
SRP54-AS1-201ENST00000554945 SCN9AQ15858 1988 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 CCDC85CA6NKD9 419 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 APAF1O14727 1248 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 PDE8AO60658 829 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 EGFRP00533 1210 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 RBM26Q5T8P6 1007 aaKnown RBP12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 RGMBQ6NW40 437 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 GBA2Q9HCG7 927 aaPredicted RBP12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 SEC31BQ9NQW1 1179 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 PSME4Q14997 1843 aa12.14□□□□□ -0.47
SRP54-AS1-201ENST00000554945 UFL1O94874 794 aa12.13□□□□□ -0.47
SRP54-AS1-201ENST00000554945 RGS19P49795 217 aa12.13□□□□□ -0.47
SRP54-AS1-201ENST00000554945 KIF4BQ2VIQ3 1234 aa12.13□□□□□ -0.47
SRP54-AS1-201ENST00000554945 DLK2Q6UY11 383 aa12.13□□□□□ -0.47
SRP54-AS1-201ENST00000554945 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
SRP54-AS1-201ENST00000554945 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
SRP54-AS1-201ENST00000554945 CWC25Q9NXE8 425 aaPredicted RBP12.13□□□□□ -0.47
SRP54-AS1-201ENST00000554945 AKAP11Q9UKA4 1901 aa12.12□□□□□ -0.47
SRP54-AS1-201ENST00000554945 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
SRP54-AS1-201ENST00000554945 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
SRP54-AS1-201ENST00000554945 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
SRP54-AS1-201ENST00000554945 AGBL3Q8NEM8 1001 aa12.12□□□□□ -0.47
SRP54-AS1-201ENST00000554945 METTL22Q9BUU2 404 aaPredicted RBP12.12□□□□□ -0.47
SRP54-AS1-201ENST00000554945 XDHP47989 1333 aa12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 ZNF609O15014 1411 aa12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 FAM155AB1AL88 458 aaPredicted RBP12.11□□□□□ -0.47
SRP54-AS1-201ENST00000554945 ADM5C9JUS6 153 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms