RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 APAF1O14727 1248 aa16.14■□□□□ 0.17
RDH11-207ENST00000554731 HUNKP57058 714 aa16.14■□□□□ 0.17
RDH11-207ENST00000554731 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
RDH11-207ENST00000554731 MYD88Q99836 296 aa16.14■□□□□ 0.17
RDH11-207ENST00000554731 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
RDH11-207ENST00000554731 PHAXQ9H814 394 aaKnown RBP16.14■□□□□ 0.17
RDH11-207ENST00000554731 KCNQ5Q9NR82 932 aa16.14■□□□□ 0.17
RDH11-207ENST00000554731 PODXL2Q9NZ53 605 aa16.14■□□□□ 0.17
RDH11-207ENST00000554731 ANKIB1Q9P2G1 1089 aa16.14■□□□□ 0.17
RDH11-207ENST00000554731 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
RDH11-207ENST00000554731 G3V3G9 751 aa16.13■□□□□ 0.17
RDH11-207ENST00000554731 UFL1O94874 794 aa16.13■□□□□ 0.17
RDH11-207ENST00000554731 NOGQ13253 232 aa16.13■□□□□ 0.17
RDH11-207ENST00000554731 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
RDH11-207ENST00000554731 RBM26Q5T8P6 1007 aaKnown RBP16.13■□□□□ 0.17
RDH11-207ENST00000554731 DCAF8Q5TAQ9 597 aa16.13■□□□□ 0.17
RDH11-207ENST00000554731 DCPSQ96C86 337 aaKnown RBP16.13■□□□□ 0.17
RDH11-207ENST00000554731 PRKRIP1Q9H875 184 aaPredicted RBP16.13■□□□□ 0.17
RDH11-207ENST00000554731 SEC31BQ9NQW1 1179 aa16.13■□□□□ 0.17
RDH11-207ENST00000554731 COL4A1P02462 1669 aa16.13■□□□□ 0.17
RDH11-207ENST00000554731 EGFRP00533 1210 aa16.12■□□□□ 0.17
RDH11-207ENST00000554731 PCCAP05165 728 aaPredicted RBP16.12■□□□□ 0.17
RDH11-207ENST00000554731 VIL1P09327 827 aaKnown RBP16.12■□□□□ 0.17
RDH11-207ENST00000554731 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
RDH11-207ENST00000554731 CWC25Q9NXE8 425 aaPredicted RBP16.12■□□□□ 0.17
RDH11-207ENST00000554731 GGA1Q9UJY5 639 aa16.12■□□□□ 0.17
RDH11-207ENST00000554731 PDE8AO60658 829 aa16.11■□□□□ 0.17
RDH11-207ENST00000554731 DDX58O95786 925 aaKnown RBP16.11■□□□□ 0.17
RDH11-207ENST00000554731 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
RDH11-207ENST00000554731 DLK2Q6UY11 383 aa16.11■□□□□ 0.17
RDH11-207ENST00000554731 C2orf69Q8N8R5 385 aa16.11■□□□□ 0.17
RDH11-207ENST00000554731 GBA2Q9HCG7 927 aaPredicted RBP16.11■□□□□ 0.17
RDH11-207ENST00000554731 CCDC85CA6NKD9 419 aa16.1■□□□□ 0.17
RDH11-207ENST00000554731 ADM5C9JUS6 153 aa16.1■□□□□ 0.17
RDH11-207ENST00000554731 CCDC30Q5VVM6 783 aa16.1■□□□□ 0.17
RDH11-207ENST00000554731 C8orf58Q8NAV2 365 aa16.1■□□□□ 0.17
RDH11-207ENST00000554731 METTL22Q9BUU2 404 aaPredicted RBP16.1■□□□□ 0.17
RDH11-207ENST00000554731 RGMBQ6NW40 437 aa16.09■□□□□ 0.17
RDH11-207ENST00000554731 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
RDH11-207ENST00000554731 SULF1Q8IWU6 871 aa16.09■□□□□ 0.17
RDH11-207ENST00000554731 JARID2Q92833 1246 aaPredicted RBP16.09■□□□□ 0.17
RDH11-207ENST00000554731 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
RDH11-207ENST00000554731 ZIC5Q96T25 663 aa16.09■□□□□ 0.17
RDH11-207ENST00000554731 GGA3Q9NZ52 723 aa16.09■□□□□ 0.17
RDH11-207ENST00000554731 AGBL3Q8NEM8 1001 aa16.08■□□□□ 0.16
RDH11-207ENST00000554731 CCDC102AQ96A19 550 aa16.08■□□□□ 0.16
RDH11-207ENST00000554731 XDHP47989 1333 aa16.08■□□□□ 0.16
RDH11-207ENST00000554731 POLR2AP24928 1970 aaKnown RBP16.07■□□□□ 0.16
RDH11-207ENST00000554731 SCN9AQ15858 1988 aa16.07■□□□□ 0.16
RDH11-207ENST00000554731 ZNF280AP59817 542 aaPredicted RBP16.07■□□□□ 0.16
RDH11-207ENST00000554731 FAM161AQ3B820 660 aa16.07■□□□□ 0.16
RDH11-207ENST00000554731 RSBN1LQ6PCB5 846 aaPredicted RBP16.07■□□□□ 0.16
RDH11-207ENST00000554731 MCOLN1Q9GZU1 580 aa16.07■□□□□ 0.16
RDH11-207ENST00000554731 MAP3K2Q9Y2U5 619 aa16.07■□□□□ 0.16
RDH11-207ENST00000554731 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
RDH11-207ENST00000554731 ZNF609O15014 1411 aa16.06■□□□□ 0.16
RDH11-207ENST00000554731 FAM155AB1AL88 458 aaPredicted RBP16.06■□□□□ 0.16
RDH11-207ENST00000554731 ATP2B4P23634 1241 aa16.06■□□□□ 0.16
RDH11-207ENST00000554731 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
RDH11-207ENST00000554731 CTSWP56202 376 aa16.06■□□□□ 0.16
RDH11-207ENST00000554731 CDC5LQ99459 802 aaKnown RBP16.06■□□□□ 0.16
RDH11-207ENST00000554731 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
RDH11-207ENST00000554731 SCARF1Q14162 830 aa16.05■□□□□ 0.16
RDH11-207ENST00000554731 KSR2Q6VAB6 950 aa16.05■□□□□ 0.16
RDH11-207ENST00000554731 TSPYL6Q8N831 410 aa16.05■□□□□ 0.16
RDH11-207ENST00000554731 PI4KAP2A4QPH2 592 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 USP17L3A6NCW0 530 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 USP17L4A6NCW7 530 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 USP17L8P0C7I0 530 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
RDH11-207ENST00000554731 NEXNQ0ZGT2 675 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 DGKZQ13574 1117 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 ANGEL2Q5VTE6 544 aaKnown RBP16.04■□□□□ 0.16
RDH11-207ENST00000554731 USP17L1Q7RTZ2 530 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 PODNQ7Z5L7 613 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 PI4KAP1Q8N8J0 262 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 CDCA5Q96FF9 252 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 GMLQ99445 158 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 STK31Q9BXU1 1019 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 SAGE1Q9NXZ1 904 aa16.04■□□□□ 0.16
RDH11-207ENST00000554731 IGKV5-2P06315 115 aa16.03■□□□□ 0.16
RDH11-207ENST00000554731 RGS19P49795 217 aa16.03■□□□□ 0.16
RDH11-207ENST00000554731 MLLT1Q03111 559 aaPredicted RBP16.03■□□□□ 0.16
RDH11-207ENST00000554731 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
RDH11-207ENST00000554731 MYOZ2Q9NPC6 264 aa16.03■□□□□ 0.16
RDH11-207ENST00000554731 BSDC1Q9NW68 430 aaPredicted RBP16.03■□□□□ 0.16
RDH11-207ENST00000554731 SLC10A3P09131 477 aa16.02■□□□□ 0.16
RDH11-207ENST00000554731 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.16
RDH11-207ENST00000554731 GREM2Q9H772 168 aa16.02■□□□□ 0.16
RDH11-207ENST00000554731 MED23Q9ULK4 1368 aa16.01■□□□□ 0.15
RDH11-207ENST00000554731 PITPNM2Q9BZ72 1349 aa16.01■□□□□ 0.15
RDH11-207ENST00000554731 FKBP1BP68106 108 aa16.01■□□□□ 0.15
RDH11-207ENST00000554731 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
RDH11-207ENST00000554731 RNF186Q9NXI6 227 aa16.01■□□□□ 0.15
RDH11-207ENST00000554731 MINPP1Q9UNW1 487 aa16.01■□□□□ 0.15
RDH11-207ENST00000554731 NEURL1BA8MQ27 555 aa16■□□□□ 0.15
RDH11-207ENST00000554731 TRPA1O75762 1119 aa16■□□□□ 0.15
RDH11-207ENST00000554731 PSME4Q14997 1843 aa16■□□□□ 0.15
RDH11-207ENST00000554731 WTIPA6NIX2 430 aaPredicted RBP15.99■□□□□ 0.15
RDH11-207ENST00000554731 IGHMBP2P38935 993 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms