RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ZBBXA8MT70 800 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 SSTR3P32745 418 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 SF3B3Q15393 1217 aaKnown RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 TMTC4Q5T4D3 741 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 OTUD7BQ6GQQ9 843 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 TCP10L2B9ZVM9 353 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 KRT13P13646 458 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 HP1BP3Q5SSJ5 553 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 SPATA24Q86W54 205 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 RAB3GAP1Q15042 981 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 ASXL3Q9C0F0 2248 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 PRDM1O75626 825 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 FOSL2P15408 326 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 CACNA2D4Q7Z3S7 1137 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 ZCRB1Q8TBF4 217 aaKnown RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 TRAK2O60296 914 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 XBP1P17861 261 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC57Q2TAC2 916 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC150Q8NCX0 1101 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 NOL7Q9UMY1 257 aaKnown RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 ADAMTS8Q9UP79 889 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 RB1CC1Q8TDY2 1594 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 FBF1Q8TES7 1133 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 STK32BQ9NY57 414 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 GOLIM4O00461 696 aa3.78□□□□□ -1.81
SYNE2-212ENST00000554584 TWISTNBQ3B726 338 aaPredicted RBP3.78□□□□□ -1.81
SYNE2-212ENST00000554584 YY1P25490 414 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 GOLGA3Q08378 1498 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 KRT19P08727 400 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 DISP3Q9P2K9 1392 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 CLRN2A0PK11 232 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 CAPN10Q9HC96 672 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 DIAPH2O60879 1101 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 MRE11P49959 708 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 ATF7IPQ6VMQ6 1270 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 C1orf131Q8NDD1 294 aaKnown RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 MED10Q9BTT4 135 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 TSPY26PQ9H489 355 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 LMOD1P29536 600 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 FMNL3Q8IVF7 1028 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 TCP11L2Q8N4U5 519 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 UTP14AQ9BVJ6 771 aaKnown RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 FBXL5Q9UKA1 691 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 HDAC9Q9UKV0 1011 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 TRIM35Q9UPQ4 493 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 CARMIL1Q5VZK9 1371 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 TAF5LO75529 589 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 PDE6AP16499 860 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 CGNQ9P2M7 1197 aaKnown RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 HDAC5Q9UQL6 1122 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 NAIPQ13075 1403 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 TTC31Q49AM3 519 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 DDX46Q7L014 1031 aaKnown RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 WDR46O15213 610 aaKnown RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 ZBTB16Q05516 673 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 KCNK9Q9NPC2 374 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 BIRC3Q13489 604 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 AIDAQ96BJ3 306 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 UBE3AQ05086 875 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 PRR12Q9ULL5 1215 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 STIM1Q13586 685 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 SEPT8Q92599 483 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 ARHGAP5Q13017 1502 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 DNAJC13O75165 2243 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 REC8O95072 547 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 DUSP27Q5VZP5 1158 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 CTR9Q6PD62 1173 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 RAB3GAP2Q9H2M9 1393 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 TXNDC9O14530 226 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 SRGAP3O43295 1099 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 USH1GQ495M9 461 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 EXT2Q93063 718 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 DYNC1LI2O43237 492 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 KANK3Q6NY19 840 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 MICU3Q86XE3 530 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 RELTQ969Z4 430 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 MYL10Q9BUA6 226 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 SLC26A6Q9BXS9 759 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 FAM114A2Q9NRY5 505 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 VPS41P49754 854 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 RPAP2Q8IXW5 612 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 TRIM22Q8IYM9 498 aa3.77□□□□□ -1.81
SYNE2-212ENST00000554584 NSFL1CQ9UNZ2 370 aaKnown RBP3.77□□□□□ -1.81
SYNE2-212ENST00000554584 PTPRGP23470 1445 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 TRIM37O94972 964 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 RBM46Q8TBY0 533 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 TSG101Q99816 390 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 WASHC2AQ641Q2 1341 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 LRCH2Q5VUJ6 765 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 FAM114A1Q8IWE2 563 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 CEP112Q8N8E3 955 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 AKNAQ7Z591 1439 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 IFIT3O14879 490 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 SZRD1Q7Z422 152 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 HEATR3Q7Z4Q2 680 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 FAM13AO94988 1023 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 TBC1D22AQ8WUA7 517 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 GOLGA8AA7E2F4 631 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 GOLGA8BA8MQT2 603 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 CASQ1P31415 396 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms