RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 PARP3Q9Y6F1 533 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 MYH2Q9UKX2 1941 aa8.42□□□□□ -1.06
LINC00517-202ENST00000554257 RAB11FIP3O75154 756 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 STAP2Q9UGK3 403 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 HDAC5Q9UQL6 1122 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 SIPA1L1O43166 1804 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 ST5P78524 1137 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 RHPN1Q8TCX5 695 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 PAPPA2Q9BXP8 1791 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 SMARCA5O60264 1052 aaPredicted RBP8.41□□□□□ -1.06
LINC00517-202ENST00000554257 CHD1LQ86WJ1 897 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 C16orf71Q8IYS4 520 aaPredicted RBP8.41□□□□□ -1.06
LINC00517-202ENST00000554257 PI4K2BQ8TCG2 481 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 TLR7Q9NYK1 1049 aaKnown RBP8.41□□□□□ -1.06
LINC00517-202ENST00000554257 PODXL2Q9NZ53 605 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 MINPP1Q9UNW1 487 aa8.41□□□□□ -1.06
LINC00517-202ENST00000554257 ZNF804BA4D1E1 1349 aa8.4□□□□□ -1.06
LINC00517-202ENST00000554257 C15orf52Q6ZUT6 534 aaKnown RBP8.4□□□□□ -1.06
LINC00517-202ENST00000554257 PLEKHM2Q8IWE5 1019 aa8.4□□□□□ -1.06
LINC00517-202ENST00000554257 EAF2Q96CJ1 260 aaPredicted RBP8.4□□□□□ -1.06
LINC00517-202ENST00000554257 ARXQ96QS3 562 aa8.4□□□□□ -1.06
LINC00517-202ENST00000554257 ANKRD18BA2A2Z9 1011 aa8.4□□□□□ -1.06
LINC00517-202ENST00000554257 NPR1P16066 1061 aa8.4□□□□□ -1.06
LINC00517-202ENST00000554257 TFCP2Q12800 502 aa8.4□□□□□ -1.06
LINC00517-202ENST00000554257 CCDC136Q96JN2 1154 aa8.4□□□□□ -1.06
LINC00517-202ENST00000554257 NLRP3Q96P20 1036 aa8.4□□□□□ -1.06
LINC00517-202ENST00000554257 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
LINC00517-202ENST00000554257 CCDC85AQ96PX6 553 aaPredicted RBP8.39□□□□□ -1.07
LINC00517-202ENST00000554257 RTFDC1Q9BY42 306 aaPredicted RBP8.39□□□□□ -1.07
LINC00517-202ENST00000554257 AOX1Q06278 1338 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 MROH5Q6ZUA9 1318 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 HMMRO75330 724 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 CHRNA5P30532 468 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 PDE6BP35913 854 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 IL15P40933 162 aaPredicted RBP8.39□□□□□ -1.07
LINC00517-202ENST00000554257 TNNI3KQ59H18 835 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 MASTLQ96GX5 879 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 ATF5Q9Y2D1 282 aaPredicted RBP8.39□□□□□ -1.07
LINC00517-202ENST00000554257 CD2APQ9Y5K6 639 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 FPGT-TNNI3KV9GXZ4 949 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 GSPT1P15170 499 aaKnown RBP8.39□□□□□ -1.07
LINC00517-202ENST00000554257 TGFB2P61812 414 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 CHRNDQ07001 517 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 DBNLQ9UJU6 430 aaKnown RBP8.39□□□□□ -1.07
LINC00517-202ENST00000554257 NAV1Q8NEY1 1877 aa8.39□□□□□ -1.07
LINC00517-202ENST00000554257 HSP90B1P14625 803 aaKnown RBP8.38□□□□□ -1.07
LINC00517-202ENST00000554257 NPM2Q86SE8 214 aaKnown RBP8.38□□□□□ -1.07
LINC00517-202ENST00000554257 KIF1BPQ96EK5 621 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 SURF6O75683 361 aaKnown RBP8.38□□□□□ -1.07
LINC00517-202ENST00000554257 PDE8BO95263 885 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 KLRK1P26718 216 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 PRELPP51888 382 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 CCDC57Q2TAC2 916 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 ZNF512BQ96KM6 892 aaPredicted RBP8.38□□□□□ -1.07
LINC00517-202ENST00000554257 LRRCC1Q9C099 1032 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 ATP6V0A2Q9Y487 856 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 DPEP1P16444 411 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 RPS8P62241 208 aaKnown RBP8.38□□□□□ -1.07
LINC00517-202ENST00000554257 GPSM2P81274 684 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 SP8Q8IXZ3 490 aa8.38□□□□□ -1.07
LINC00517-202ENST00000554257 RBM17Q96I25 401 aaKnown RBP8.38□□□□□ -1.07
LINC00517-202ENST00000554257 SIL1Q9H173 461 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 SNAP23O00161 211 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 MSH5O43196 834 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 ADORA1P30542 326 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 C2CD5Q86YS7 1000 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 MED23Q9ULK4 1368 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
LINC00517-202ENST00000554257 BBOX1O75936 387 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 ARID4AP29374 1257 aaPredicted RBP8.37□□□□□ -1.07
LINC00517-202ENST00000554257 ERC1Q8IUD2 1116 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 POLLQ9UGP5 575 aa8.37□□□□□ -1.07
LINC00517-202ENST00000554257 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
LINC00517-202ENST00000554257 TXNRD3Q86VQ6 643 aa8.36□□□□□ -1.07
LINC00517-202ENST00000554257 ANKRD18AQ8IVF6 992 aa8.36□□□□□ -1.07
LINC00517-202ENST00000554257 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.36□□□□□ -1.07
LINC00517-202ENST00000554257 CDC5LQ99459 802 aaKnown RBP8.36□□□□□ -1.07
LINC00517-202ENST00000554257 PDE1AP54750 535 aa8.36□□□□□ -1.07
LINC00517-202ENST00000554257 HSP90AB4PQ58FF6 505 aa8.36□□□□□ -1.07
LINC00517-202ENST00000554257 LDHAL6AQ6ZMR3 332 aa8.36□□□□□ -1.07
LINC00517-202ENST00000554257 TMC4Q7Z404 712 aa8.36□□□□□ -1.07
LINC00517-202ENST00000554257 LNPKQ9C0E8 428 aa8.36□□□□□ -1.07
LINC00517-202ENST00000554257 IL1RAPL2Q9NP60 686 aa8.36□□□□□ -1.07
LINC00517-202ENST00000554257 A0A0G2JLW4 131 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 ANKRD45Q5TZF3 282 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 FBXO33Q7Z6M2 555 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 PDS5AQ29RF7 1337 aaKnown RBP8.35□□□□□ -1.07
LINC00517-202ENST00000554257 TTC41PQ6P2S7 1318 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 WDR90Q96KV7 1748 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 A0A1B0GUL7 405 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
LINC00517-202ENST00000554257 DBNDD2Q9BQY9 259 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 GREB1LQ9C091 1923 aaPredicted RBP8.35□□□□□ -1.07
LINC00517-202ENST00000554257 BAZ2AQ9UIF9 1905 aaKnown RBP8.35□□□□□ -1.07
LINC00517-202ENST00000554257 TAF5LO75529 589 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 SCARF1Q14162 830 aa8.35□□□□□ -1.07
LINC00517-202ENST00000554257 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
LINC00517-202ENST00000554257 LTBP3Q9NS15 1303 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms