RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PDS5AQ29RF7 1337 aaKnown RBP13.29□□□□□ -0.28
PABPN1-203ENST00000553960 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
PABPN1-203ENST00000553960 RPS8P62241 208 aaKnown RBP13.28□□□□□ -0.28
PABPN1-203ENST00000553960 PUM3Q15397 648 aaKnown RBP13.28□□□□□ -0.28
PABPN1-203ENST00000553960 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
PABPN1-203ENST00000553960 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
PABPN1-203ENST00000553960 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
PABPN1-203ENST00000553960 NUTM1Q86Y26 1132 aa13.28□□□□□ -0.28
PABPN1-203ENST00000553960 CNTROBQ8N137 903 aa13.28□□□□□ -0.28
PABPN1-203ENST00000553960 PUS3Q9BZE2 481 aaKnown RBP13.28□□□□□ -0.28
PABPN1-203ENST00000553960 SIL1Q9H173 461 aa13.28□□□□□ -0.28
PABPN1-203ENST00000553960 STK32BQ9NY57 414 aa13.28□□□□□ -0.28
PABPN1-203ENST00000553960 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.28
PABPN1-203ENST00000553960 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.28
PABPN1-203ENST00000553960 A0A1B0GUL7 405 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 BBOX1O75936 387 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.29
PABPN1-203ENST00000553960 ST5P78524 1137 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 DDR1Q08345 913 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 EZH2Q15910 746 aaKnown RBP13.27□□□□□ -0.29
PABPN1-203ENST00000553960 TAF7LQ5H9L4 462 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 ANKRD18AQ8IVF6 992 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.29
PABPN1-203ENST00000553960 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 ANKRD2Q9GZV1 360 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 UPF2Q9HAU5 1272 aaKnown RBP13.27□□□□□ -0.29
PABPN1-203ENST00000553960 CHMP3Q9Y3E7 222 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 TNRC6CQ9HCJ0 1690 aaKnown RBP13.27□□□□□ -0.29
PABPN1-203ENST00000553960 ANKRD31Q8N7Z5 1873 aa13.27□□□□□ -0.29
PABPN1-203ENST00000553960 ZNF804BA4D1E1 1349 aa13.26□□□□□ -0.29
PABPN1-203ENST00000553960 APBB1O00213 710 aa13.26□□□□□ -0.29
PABPN1-203ENST00000553960 REC8O95072 547 aa13.26□□□□□ -0.29
PABPN1-203ENST00000553960 CHMLP26374 656 aa13.26□□□□□ -0.29
PABPN1-203ENST00000553960 ARID4AP29374 1257 aaPredicted RBP13.26□□□□□ -0.29
PABPN1-203ENST00000553960 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
PABPN1-203ENST00000553960 RAD50Q92878 1312 aa13.26□□□□□ -0.29
PABPN1-203ENST00000553960 CNNM1Q9NRU3 951 aa13.26□□□□□ -0.29
PABPN1-203ENST00000553960 PHF14O94880 888 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 GRAPQ13588 217 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 ATP2B3Q16720 1220 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 METTL24Q5JXM2 366 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 DDX46Q7L014 1031 aaKnown RBP13.25□□□□□ -0.29
PABPN1-203ENST00000553960 GRAPLQ8TC17 118 aaPredicted RBP13.25□□□□□ -0.29
PABPN1-203ENST00000553960 DBNDD2Q9BQY9 259 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
PABPN1-203ENST00000553960 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
PABPN1-203ENST00000553960 SEMA3EO15041 775 aa13.24□□□□□ -0.29
PABPN1-203ENST00000553960 LRRFIP1Q32MZ4 808 aaKnown RBP13.24□□□□□ -0.29
PABPN1-203ENST00000553960 CCDC158Q5M9N0 1113 aa13.24□□□□□ -0.29
PABPN1-203ENST00000553960 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
PABPN1-203ENST00000553960 RUFY2Q8WXA3 655 aa13.24□□□□□ -0.29
PABPN1-203ENST00000553960 XAGE2Q96GT9 111 aa13.24□□□□□ -0.29
PABPN1-203ENST00000553960 CCDC8Q9H0W5 538 aaPredicted RBP13.24□□□□□ -0.29
PABPN1-203ENST00000553960 MINPP1Q9UNW1 487 aa13.24□□□□□ -0.29
PABPN1-203ENST00000553960 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
PABPN1-203ENST00000553960 IRS2Q9Y4H2 1338 aa13.23□□□□□ -0.29
PABPN1-203ENST00000553960 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
PABPN1-203ENST00000553960 PDE6BP35913 854 aa13.23□□□□□ -0.29
PABPN1-203ENST00000553960 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
PABPN1-203ENST00000553960 SMIM5Q71RC9 77 aa13.23□□□□□ -0.29
PABPN1-203ENST00000553960 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
PABPN1-203ENST00000553960 ESYT1Q9BSJ8 1104 aa13.23□□□□□ -0.29
PABPN1-203ENST00000553960 TLR7Q9NYK1 1049 aaKnown RBP13.23□□□□□ -0.29
PABPN1-203ENST00000553960 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
PABPN1-203ENST00000553960 SGSM2O43147 1006 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 SEC24BO95487 1268 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
PABPN1-203ENST00000553960 SLC5A1P13866 664 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 ANAPC15P60006 121 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 TIMM10P62072 90 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 CHRNDQ07001 517 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 RBM17Q96I25 401 aaKnown RBP13.22□□□□□ -0.29
PABPN1-203ENST00000553960 USP26Q9BXU7 913 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 PARP3Q9Y6F1 533 aa13.22□□□□□ -0.29
PABPN1-203ENST00000553960 COL4A1P02462 1669 aa13.21□□□□□ -0.29
PABPN1-203ENST00000553960 DUOX1Q9NRD9 1551 aa13.21□□□□□ -0.29
PABPN1-203ENST00000553960 DOCK2Q92608 1830 aa13.21□□□□□ -0.29
PABPN1-203ENST00000553960 SRGNP10124 158 aa13.21□□□□□ -0.29
PABPN1-203ENST00000553960 NPR1P16066 1061 aa13.21□□□□□ -0.29
PABPN1-203ENST00000553960 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
PABPN1-203ENST00000553960 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.29
PABPN1-203ENST00000553960 FBXO33Q7Z6M2 555 aa13.21□□□□□ -0.29
PABPN1-203ENST00000553960 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
PABPN1-203ENST00000553960 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
PABPN1-203ENST00000553960 MMP10P09238 476 aa13.2□□□□□ -0.3
PABPN1-203ENST00000553960 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
PABPN1-203ENST00000553960 SP8Q8IXZ3 490 aa13.2□□□□□ -0.3
PABPN1-203ENST00000553960 KCNB2Q92953 911 aa13.2□□□□□ -0.3
PABPN1-203ENST00000553960 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
PABPN1-203ENST00000553960 MYH7P12883 1935 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 XDHP47989 1333 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 TAF1P21675 1872 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 TRIM6-TRIM34B2RNG4 842 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 CCDC102BQ68D86 513 aa13.19□□□□□ -0.3
PABPN1-203ENST00000553960 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms