RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 IGKV5-2P06315 115 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 HSPA1AP0DMV8 641 aaKnown RBP8.29□□□□□ -1.08
FOXN3-205ENST00000553904 HSPA1BP0DMV9 641 aaKnown RBP8.29□□□□□ -1.08
FOXN3-205ENST00000553904 MMP14P50281 582 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 EXOSC9Q06265 439 aaKnown RBP8.29□□□□□ -1.08
FOXN3-205ENST00000553904 GCKRQ14397 625 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 UBE3BQ7Z3V4 1068 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 JARID2Q92833 1246 aaPredicted RBP8.29□□□□□ -1.08
FOXN3-205ENST00000553904 DCPSQ96C86 337 aaKnown RBP8.29□□□□□ -1.08
FOXN3-205ENST00000553904 PLA2G12BQ9BX93 195 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 ANKRD2Q9GZV1 360 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 DBNDD1Q9H9R9 158 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 CNTNAP1P78357 1384 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 FANCIQ9NVI1 1328 aa8.29□□□□□ -1.08
FOXN3-205ENST00000553904 PSMD14O00487 310 aa8.28□□□□□ -1.08
FOXN3-205ENST00000553904 VIL1P09327 827 aaKnown RBP8.28□□□□□ -1.08
FOXN3-205ENST00000553904 VEGFBP49765 207 aa8.28□□□□□ -1.08
FOXN3-205ENST00000553904 CWF19L2Q2TBE0 894 aaKnown RBP8.28□□□□□ -1.08
FOXN3-205ENST00000553904 MICALL2Q8IY33 904 aa8.28□□□□□ -1.08
FOXN3-205ENST00000553904 OGFOD1Q8N543 542 aa8.28□□□□□ -1.08
FOXN3-205ENST00000553904 AGBL3Q8NEM8 1001 aa8.28□□□□□ -1.08
FOXN3-205ENST00000553904 CCDC85AQ96PX6 553 aaPredicted RBP8.28□□□□□ -1.08
FOXN3-205ENST00000553904 C9orf78Q9NZ63 289 aaPredicted RBP8.28□□□□□ -1.08
FOXN3-205ENST00000553904 MINPP1Q9UNW1 487 aa8.28□□□□□ -1.08
FOXN3-205ENST00000553904 ANKRD18BA2A2Z9 1011 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 USP17L3A6NCW0 530 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 USP17L4A6NCW7 530 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 YDJCA8MPS7 323 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 MAP2K2P36507 400 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 KCNJ4P48050 445 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 CTCFP49711 727 aaPredicted RBP8.27□□□□□ -1.09
FOXN3-205ENST00000553904 IFIT5Q13325 482 aaKnown RBP8.27□□□□□ -1.09
FOXN3-205ENST00000553904 RBM26Q5T8P6 1007 aaKnown RBP8.27□□□□□ -1.09
FOXN3-205ENST00000553904 PAXIP1Q6ZW49 1069 aaPredicted RBP8.27□□□□□ -1.09
FOXN3-205ENST00000553904 G2E3Q7L622 706 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 USP17L1Q7RTZ2 530 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 TNS4Q8IZW8 715 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 C2orf69Q8N8R5 385 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
FOXN3-205ENST00000553904 GPR101Q96P66 508 aaPredicted RBP8.27□□□□□ -1.09
FOXN3-205ENST00000553904 ZBTB12Q9Y330 459 aaPredicted RBP8.27□□□□□ -1.09
FOXN3-205ENST00000553904 WDR33Q9C0J8 1336 aaKnown RBP8.27□□□□□ -1.09
FOXN3-205ENST00000553904 CACNA1SQ13698 1873 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 RTL9Q8NET4 1388 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 E9PSI1 815 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 CELF2O95319 508 aaKnown RBP8.26□□□□□ -1.09
FOXN3-205ENST00000553904 CSF1RP07333 972 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 ITGA6P23229 1130 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 CCT4P50991 539 aaKnown RBP8.26□□□□□ -1.09
FOXN3-205ENST00000553904 CCDC57Q2TAC2 916 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 CST9Q5W186 159 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 RSBN1LQ6PCB5 846 aaPredicted RBP8.26□□□□□ -1.09
FOXN3-205ENST00000553904 SAMD7Q7Z3H4 446 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 KRT26Q7Z3Y9 468 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 SULF1Q8IWU6 871 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 COA1Q9GZY4 146 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 GREM2Q9H772 168 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 PRDM10Q9NQV6 1147 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 TLL2Q9Y6L7 1015 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 MYO3BQ8WXR4 1341 aa8.26□□□□□ -1.09
FOXN3-205ENST00000553904 ALDH1L1O75891 902 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 HIRAP54198 1017 aaPredicted RBP8.25□□□□□ -1.09
FOXN3-205ENST00000553904 KIF4BQ2VIQ3 1234 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 TBC1D10BQ4KMP7 808 aaPredicted RBP8.25□□□□□ -1.09
FOXN3-205ENST00000553904 TAF7LQ5H9L4 462 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 BEND3Q5T5X7 828 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
FOXN3-205ENST00000553904 STRIP1Q5VSL9 837 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 SAPCD2Q86UD0 394 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 USP48Q86UV5 1035 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 SLC51AQ86UW1 340 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 CAPNS2Q96L46 248 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 GLIS2Q9BZE0 524 aaPredicted RBP8.25□□□□□ -1.09
FOXN3-205ENST00000553904 WBP1LQ9NX94 342 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 HDAC9Q9UKV0 1011 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 CHMP3Q9Y3E7 222 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 ZNF804BA4D1E1 1349 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 ANKRD36CQ5JPF3 1778 aa8.25□□□□□ -1.09
FOXN3-205ENST00000553904 GRM8O00222 908 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 TRAF5O00463 557 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 CA12O43570 354 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 TTLL5Q6EMB2 1281 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 SLC4A10Q6U841 1118 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 LDHAL6AQ6ZMR3 332 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 TRPM4Q8TD43 1214 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 CCDC102AQ96A19 550 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 ZNF408Q9H9D4 720 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 KCNQ5Q9NR82 932 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 HDAC5Q9UQL6 1122 aa8.24□□□□□ -1.09
FOXN3-205ENST00000553904 MED23Q9ULK4 1368 aa8.23□□□□□ -1.09
FOXN3-205ENST00000553904 F6X3S4 739 aa8.23□□□□□ -1.09
FOXN3-205ENST00000553904 CASP7P55210 303 aa8.23□□□□□ -1.09
FOXN3-205ENST00000553904 ZNF280AP59817 542 aaPredicted RBP8.23□□□□□ -1.09
FOXN3-205ENST00000553904 CHRNDQ07001 517 aa8.23□□□□□ -1.09
FOXN3-205ENST00000553904 NOGQ13253 232 aa8.23□□□□□ -1.09
FOXN3-205ENST00000553904 GRM1Q13255 1194 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms