RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
LETMD1-234ENST00000552645 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
LETMD1-234ENST00000552645 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
LETMD1-234ENST00000552645 LRRC37AA6NMS7 1700 aa12.41□□□□□ -0.42
LETMD1-234ENST00000552645 GNAI2P04899 355 aa12.4□□□□□ -0.42
LETMD1-234ENST00000552645 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
LETMD1-234ENST00000552645 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
LETMD1-234ENST00000552645 LMNB1P20700 586 aa12.4□□□□□ -0.42
LETMD1-234ENST00000552645 YY1P25490 414 aa12.4□□□□□ -0.42
LETMD1-234ENST00000552645 RRP1P56182 461 aaKnown RBP12.4□□□□□ -0.42
LETMD1-234ENST00000552645 GPSM2P81274 684 aa12.4□□□□□ -0.42
LETMD1-234ENST00000552645 MVPQ14764 893 aaKnown RBP12.4□□□□□ -0.42
LETMD1-234ENST00000552645 IL27Q8NEV9 243 aa12.4□□□□□ -0.42
LETMD1-234ENST00000552645 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
LETMD1-234ENST00000552645 CNNM1Q9NRU3 951 aa12.4□□□□□ -0.42
LETMD1-234ENST00000552645 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
LETMD1-234ENST00000552645 RABL6Q3YEC7 729 aaPredicted RBP12.39□□□□□ -0.43
LETMD1-234ENST00000552645 LDHAL6AQ6ZMR3 332 aa12.39□□□□□ -0.43
LETMD1-234ENST00000552645 CCDC136Q96JN2 1154 aa12.39□□□□□ -0.43
LETMD1-234ENST00000552645 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
LETMD1-234ENST00000552645 TIAM2Q8IVF5 1701 aa12.39□□□□□ -0.43
LETMD1-234ENST00000552645 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-234ENST00000552645 PRELPP51888 382 aa12.38□□□□□ -0.43
LETMD1-234ENST00000552645 IRX6P78412 446 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-234ENST00000552645 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
LETMD1-234ENST00000552645 GRIPAP1Q4V328 841 aa12.38□□□□□ -0.43
LETMD1-234ENST00000552645 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-234ENST00000552645 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-234ENST00000552645 DDX19BQ9UMR2 479 aa12.38□□□□□ -0.43
LETMD1-234ENST00000552645 MINPP1Q9UNW1 487 aa12.38□□□□□ -0.43
LETMD1-234ENST00000552645 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 PPIP5K2O43314 1243 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 UFL1O94874 794 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 IARSP41252 1262 aaKnown RBP12.37□□□□□ -0.43
LETMD1-234ENST00000552645 AOC3Q16853 763 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 SUPT20HQ8NEM7 779 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 HELBQ8NG08 1087 aaPredicted RBP12.37□□□□□ -0.43
LETMD1-234ENST00000552645 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
LETMD1-234ENST00000552645 PSMD1Q99460 953 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 SIL1Q9H173 461 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 XDHP47989 1333 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 KCNJ4P48050 445 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
LETMD1-234ENST00000552645 POLLQ9UGP5 575 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 GGA1Q9UJY5 639 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 A0A1B0GUL6 1792 aa12.37□□□□□ -0.43
LETMD1-234ENST00000552645 DUOX1Q9NRD9 1551 aa12.36□□□□□ -0.43
LETMD1-234ENST00000552645 LTBP1Q14766 1721 aa12.36□□□□□ -0.43
LETMD1-234ENST00000552645 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
LETMD1-234ENST00000552645 TAF5LO75529 589 aa12.36□□□□□ -0.43
LETMD1-234ENST00000552645 CHRNDQ07001 517 aa12.36□□□□□ -0.43
LETMD1-234ENST00000552645 LRRC24Q50LG9 513 aa12.36□□□□□ -0.43
LETMD1-234ENST00000552645 TBC1D16Q8TBP0 767 aa12.36□□□□□ -0.43
LETMD1-234ENST00000552645 G3V3G9 751 aa12.35□□□□□ -0.43
LETMD1-234ENST00000552645 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
LETMD1-234ENST00000552645 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
LETMD1-234ENST00000552645 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
LETMD1-234ENST00000552645 ANKRD2Q9GZV1 360 aa12.35□□□□□ -0.43
LETMD1-234ENST00000552645 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
LETMD1-234ENST00000552645 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
LETMD1-234ENST00000552645 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
LETMD1-234ENST00000552645 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
LETMD1-234ENST00000552645 NIM1KQ8IY84 436 aa12.34□□□□□ -0.43
LETMD1-234ENST00000552645 EYA3Q99504 573 aa12.34□□□□□ -0.43
LETMD1-234ENST00000552645 RTFDC1Q9BY42 306 aaPredicted RBP12.34□□□□□ -0.43
LETMD1-234ENST00000552645 ZC3H12CQ9C0D7 883 aaKnown RBP12.34□□□□□ -0.43
LETMD1-234ENST00000552645 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
LETMD1-234ENST00000552645 SNAP23O00161 211 aa12.33□□□□□ -0.43
LETMD1-234ENST00000552645 ATP2B4P23634 1241 aa12.33□□□□□ -0.43
LETMD1-234ENST00000552645 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.43
LETMD1-234ENST00000552645 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.43
LETMD1-234ENST00000552645 PODXL2Q9NZ53 605 aa12.33□□□□□ -0.43
LETMD1-234ENST00000552645 ZNF804BA4D1E1 1349 aa12.33□□□□□ -0.44
LETMD1-234ENST00000552645 COL4A5P29400 1685 aa12.33□□□□□ -0.44
LETMD1-234ENST00000552645 KIAA2012Q0VF49 1180 aa12.33□□□□□ -0.44
LETMD1-234ENST00000552645 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
LETMD1-234ENST00000552645 CRBNQ96SW2 442 aa12.33□□□□□ -0.44
LETMD1-234ENST00000552645 DBNDD1Q9H9R9 158 aa12.33□□□□□ -0.44
LETMD1-234ENST00000552645 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
LETMD1-234ENST00000552645 RIPOR2Q9Y4F9 1068 aa12.33□□□□□ -0.44
LETMD1-234ENST00000552645 MROH5Q6ZUA9 1318 aa12.32□□□□□ -0.44
LETMD1-234ENST00000552645 EYA2O00167 538 aa12.32□□□□□ -0.44
LETMD1-234ENST00000552645 ATP8B2P98198 1209 aa12.32□□□□□ -0.44
LETMD1-234ENST00000552645 MTX1Q13505 466 aa12.32□□□□□ -0.44
LETMD1-234ENST00000552645 LEMD3Q9Y2U8 911 aa12.32□□□□□ -0.44
LETMD1-234ENST00000552645 KLRK1P26718 216 aa12.31□□□□□ -0.44
LETMD1-234ENST00000552645 EIF6P56537 245 aaKnown RBP12.31□□□□□ -0.44
LETMD1-234ENST00000552645 OS9Q13438 667 aaPredicted RBP12.31□□□□□ -0.44
LETMD1-234ENST00000552645 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
LETMD1-234ENST00000552645 GJA3Q9Y6H8 435 aa12.31□□□□□ -0.44
LETMD1-234ENST00000552645 ZNF541Q9H0D2 1346 aa12.31□□□□□ -0.44
LETMD1-234ENST00000552645 ECE2O60344 883 aa12.3□□□□□ -0.44
LETMD1-234ENST00000552645 G3BP1Q13283 466 aaKnown RBP eCLIP12.3□□□□□ -0.44
LETMD1-234ENST00000552645 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
LETMD1-234ENST00000552645 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
LETMD1-234ENST00000552645 COPRSQ9NQ92 184 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms