RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 SIL1Q9H173 461 aa8.2□□□□□ -1.1
CCDC59-206ENST00000552412 ALDH8A1Q9H2A2 487 aaPredicted RBP8.2□□□□□ -1.1
CCDC59-206ENST00000552412 SH2B1Q9NRF2 756 aaPredicted RBP8.2□□□□□ -1.1
CCDC59-206ENST00000552412 DBNLQ9UJU6 430 aaKnown RBP8.2□□□□□ -1.1
CCDC59-206ENST00000552412 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.2□□□□□ -1.1
CCDC59-206ENST00000552412 MAP3K15Q6ZN16 1313 aa8.2□□□□□ -1.1
CCDC59-206ENST00000552412 ERVV-1B6SEH8 477 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 EYA2O00167 538 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
CCDC59-206ENST00000552412 MAP4K4O95819 1239 aaPredicted RBP8.19□□□□□ -1.1
CCDC59-206ENST00000552412 SSFA2P28290 1259 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 TFCP2Q12800 502 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 KRT32Q14532 448 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 NECTIN1Q15223 517 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 ANKRD1Q15327 319 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
CCDC59-206ENST00000552412 GIGYF2Q6Y7W6 1299 aaKnown RBP8.19□□□□□ -1.1
CCDC59-206ENST00000552412 ZBTB38Q8NAP3 1195 aaPredicted RBP8.19□□□□□ -1.1
CCDC59-206ENST00000552412 AK7Q96M32 723 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 FSD1Q9BTV5 496 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 CCDC8Q9H0W5 538 aaPredicted RBP8.19□□□□□ -1.1
CCDC59-206ENST00000552412 IL25Q9H293 177 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 LIMCH1Q9UPQ0 1083 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 AKAP2Q9Y2D5 859 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.19□□□□□ -1.1
CCDC59-206ENST00000552412 SH3TC1Q8TE82 1336 aa8.19□□□□□ -1.1
CCDC59-206ENST00000552412 RPAP1Q9BWH6 1393 aaPredicted RBP8.19□□□□□ -1.1
CCDC59-206ENST00000552412 NUP98P52948 1817 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 GOLGA6L3A6NEY3 463 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 BRD1O95696 1058 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 CSF1RP07333 972 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 CYP19A1P11511 503 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-206ENST00000552412 IL6STP40189 918 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-206ENST00000552412 PIP4K2AP48426 406 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-206ENST00000552412 NMIQ13287 307 aaPredicted RBP8.18□□□□□ -1.1
CCDC59-206ENST00000552412 USPL1Q5W0Q7 1092 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 BARGINQ6ZT62 677 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 ATG9AQ7Z3C6 839 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 KBTBD3Q8NAB2 608 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 BOLA2Q9H3K6 86 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 ZBTB3Q9H5J0 574 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 ZSWIM6Q9HCJ5 1215 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 TLR7Q9NYK1 1049 aaKnown RBP8.18□□□□□ -1.1
CCDC59-206ENST00000552412 ASAP1Q9ULH1 1129 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 CYP46A1Q9Y6A2 500 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 SPATA31A1Q5TZJ5 1347 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 WDR33Q9C0J8 1336 aaKnown RBP8.18□□□□□ -1.1
CCDC59-206ENST00000552412 SLIT2O94813 1529 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 LRP5O75197 1615 aa8.18□□□□□ -1.1
CCDC59-206ENST00000552412 HSP90B1P14625 803 aaKnown RBP8.17□□□□□ -1.1
CCDC59-206ENST00000552412 MRE11P49959 708 aa8.17□□□□□ -1.1
CCDC59-206ENST00000552412 CCDC57Q2TAC2 916 aa8.17□□□□□ -1.1
CCDC59-206ENST00000552412 CREB3L3Q68CJ9 461 aa8.17□□□□□ -1.1
CCDC59-206ENST00000552412 DNAJC10Q8IXB1 793 aa8.17□□□□□ -1.1
CCDC59-206ENST00000552412 ZGPATQ8N5A5 531 aaKnown RBP8.17□□□□□ -1.1
CCDC59-206ENST00000552412 KLHDC4Q8TBB5 520 aa8.17□□□□□ -1.1
CCDC59-206ENST00000552412 HELLSQ9NRZ9 838 aa8.17□□□□□ -1.1
CCDC59-206ENST00000552412 RBM8AQ9Y5S9 174 aaKnown RBP8.17□□□□□ -1.1
CCDC59-206ENST00000552412 LAMB2P55268 1798 aa8.17□□□□□ -1.1
CCDC59-206ENST00000552412 A0A0D9SFI3 127 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 SLC27A2O14975 620 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 MBD3O95983 291 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 CASTP20810 708 aaKnown RBP8.16□□□□□ -1.1
CCDC59-206ENST00000552412 KCNJ4P48050 445 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 PTH1RQ03431 593 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 MCMDC2Q4G0Z9 681 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 SPATA31A5Q5VU36 1347 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 PRPF40BQ6NWY9 871 aaKnown RBP8.16□□□□□ -1.1
CCDC59-206ENST00000552412 RUFY3Q7L099 469 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 SPATA31A7Q8IWB4 1347 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 ZNF512BQ96KM6 892 aaPredicted RBP8.16□□□□□ -1.1
CCDC59-206ENST00000552412 DBNDD2Q9BQY9 259 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 UPF3BQ9BZI7 483 aaKnown RBP8.16□□□□□ -1.1
CCDC59-206ENST00000552412 PDRG1Q9NUG6 133 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 CEP126Q9P2H0 1117 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 CHMP3Q9Y3E7 222 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 ATP6V1DQ9Y5K8 247 aa8.16□□□□□ -1.1
CCDC59-206ENST00000552412 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.16□□□□□ -1.1
CCDC59-206ENST00000552412 KAT6BQ8WYB5 2073 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 MYH7P12883 1935 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 ARAP2Q8WZ64 1704 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 TAF5LO75529 589 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 ZFYP08048 801 aaPredicted RBP8.15□□□□□ -1.1
CCDC59-206ENST00000552412 HMGB1P09429 215 aaKnown RBP8.15□□□□□ -1.1
CCDC59-206ENST00000552412 AK2P54819 239 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 IFIT5Q13325 482 aaKnown RBP8.15□□□□□ -1.1
CCDC59-206ENST00000552412 DDB1Q16531 1140 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 BLOC1S2Q6QNY1 142 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 NLRP10Q86W26 655 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 SMARCC1Q92922 1105 aaPredicted RBP8.15□□□□□ -1.1
CCDC59-206ENST00000552412 CHMP4CQ96CF2 233 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 MS4A4AQ96JQ5 239 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 FAM227BQ96M60 508 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 JAKMIP1Q96N16 626 aaKnown RBP8.15□□□□□ -1.1
CCDC59-206ENST00000552412 PAG1Q9NWQ8 432 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 ZDHHC9Q9Y397 364 aa8.15□□□□□ -1.1
CCDC59-206ENST00000552412 RTL9Q8NET4 1388 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms