RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 LRP10Q7Z4F1 713 aa27.82■■■□□ 2.04
NPAS3-211ENST00000551634 SH3TC1Q8TE82 1336 aa27.82■■■□□ 2.04
NPAS3-211ENST00000551634 KDM6AO15550 1401 aaPredicted RBP27.81■■■□□ 2.04
NPAS3-211ENST00000551634 ATL3Q6DD88 541 aa27.81■■■□□ 2.04
NPAS3-211ENST00000551634 RAPGEF4Q8WZA2 1011 aa27.81■■■□□ 2.04
NPAS3-211ENST00000551634 ORAI2Q96SN7 254 aa27.81■■■□□ 2.04
NPAS3-211ENST00000551634 DNAJC25Q9H1X3 360 aa27.81■■■□□ 2.04
NPAS3-211ENST00000551634 ZSCAN25Q6NSZ9 544 aa27.8■■■□□ 2.04
NPAS3-211ENST00000551634 SCRN1Q12765 414 aa27.8■■■□□ 2.04
NPAS3-211ENST00000551634 SARM1Q6SZW1 724 aa27.8■■■□□ 2.04
NPAS3-211ENST00000551634 KBTBD3Q8NAB2 608 aa27.8■■■□□ 2.04
NPAS3-211ENST00000551634 RCOR1Q9UKL0 485 aa27.8■■■□□ 2.04
NPAS3-211ENST00000551634 ANKRD7Q92527 254 aa27.79■■■□□ 2.04
NPAS3-211ENST00000551634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.79■■■□□ 2.04
NPAS3-211ENST00000551634 SNRPA1P09661 255 aaKnown RBP27.79■■■□□ 2.04
NPAS3-211ENST00000551634 DHX32Q7L7V1 743 aaKnown RBP27.79■■■□□ 2.04
NPAS3-211ENST00000551634 DNAJC2Q99543 621 aaKnown RBP27.79■■■□□ 2.04
NPAS3-211ENST00000551634 DBNDD2Q9BQY9 259 aa27.79■■■□□ 2.04
NPAS3-211ENST00000551634 TRPM3Q9HCF6 1732 aaPredicted RBP27.79■■■□□ 2.04
NPAS3-211ENST00000551634 PHKG2P15735 406 aa27.78■■■□□ 2.04
NPAS3-211ENST00000551634 ADD1P35611 737 aaKnown RBP27.78■■■□□ 2.04
NPAS3-211ENST00000551634 LMOD2Q6P5Q4 547 aa27.78■■■□□ 2.04
NPAS3-211ENST00000551634 CCDC129Q6ZRS4 1044 aa27.78■■■□□ 2.04
NPAS3-211ENST00000551634 NFATC2IPQ8NCF5 419 aa27.78■■■□□ 2.04
NPAS3-211ENST00000551634 ZNF496Q96IT1 587 aaPredicted RBP27.78■■■□□ 2.04
NPAS3-211ENST00000551634 ARID3AQ99856 593 aa27.78■■■□□ 2.04
NPAS3-211ENST00000551634 PALLDQ8WX93 1383 aa27.78■■■□□ 2.04
NPAS3-211ENST00000551634 SEC62Q99442 399 aaKnown RBP27.77■■■□□ 2.04
NPAS3-211ENST00000551634 CLIP2Q9UDT6 1046 aa27.77■■■□□ 2.04
NPAS3-211ENST00000551634 FGD1P98174 961 aa27.77■■■□□ 2.04
NPAS3-211ENST00000551634 SYCP1Q15431 976 aa27.77■■■□□ 2.04
NPAS3-211ENST00000551634 NSUN7Q8NE18 718 aaKnown RBP27.77■■■□□ 2.04
NPAS3-211ENST00000551634 DDX11Q96FC9 970 aa27.77■■■□□ 2.04
NPAS3-211ENST00000551634 AGXT2Q9BYV1 514 aa27.77■■■□□ 2.04
NPAS3-211ENST00000551634 NRBP1Q9UHY1 535 aa27.77■■■□□ 2.04
NPAS3-211ENST00000551634 MST1RQ04912 1400 aa27.77■■■□□ 2.04
NPAS3-211ENST00000551634 IQCB1Q15051 598 aa27.76■■■□□ 2.04
NPAS3-211ENST00000551634 UBE3BQ7Z3V4 1068 aa27.76■■■□□ 2.04
NPAS3-211ENST00000551634 CHMP4CQ96CF2 233 aa27.76■■■□□ 2.04
NPAS3-211ENST00000551634 DSCC1Q9BVC3 393 aa27.76■■■□□ 2.04
NPAS3-211ENST00000551634 HELLSQ9NRZ9 838 aa27.76■■■□□ 2.04
NPAS3-211ENST00000551634 AFDNP55196 1824 aaKnown RBP27.76■■■□□ 2.03
NPAS3-211ENST00000551634 MYH15Q9Y2K3 1946 aa27.76■■■□□ 2.03
NPAS3-211ENST00000551634 LRMPQ12912 555 aa27.76■■■□□ 2.03
NPAS3-211ENST00000551634 PDCL2Q8N4E4 241 aa27.76■■■□□ 2.03
NPAS3-211ENST00000551634 PLEKHG2Q9H7P9 1386 aa27.76■■■□□ 2.03
NPAS3-211ENST00000551634 RGPD5Q99666 1765 aa27.76■■■□□ 2.03
NPAS3-211ENST00000551634 GOLGA6L19H0YKK7 550 aa27.76■■■□□ 2.03
NPAS3-211ENST00000551634 TATP17735 454 aaPredicted RBP27.76■■■□□ 2.03
NPAS3-211ENST00000551634 MRFAP1L1Q96HT8 127 aa27.75■■■□□ 2.03
NPAS3-211ENST00000551634 SMTNL1A8MU46 457 aa27.75■■■□□ 2.03
NPAS3-211ENST00000551634 NEMFO60524 1076 aa27.75■■■□□ 2.03
NPAS3-211ENST00000551634 STX1AQ16623 288 aa27.75■■■□□ 2.03
NPAS3-211ENST00000551634 STOX1Q6ZVD7 989 aa27.75■■■□□ 2.03
NPAS3-211ENST00000551634 PRDM4Q9UKN5 801 aa27.75■■■□□ 2.03
NPAS3-211ENST00000551634 ABCC6O95255 1503 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 PPP4R3BQ5MIZ7 849 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 USP16Q9Y5T5 823 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 A0A087WZG4 1122 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 CASP7P55210 303 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 DDX46Q7L014 1031 aaKnown RBP27.74■■■□□ 2.03
NPAS3-211ENST00000551634 KRT28Q7Z3Y7 464 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 IFNL2Q8IZJ0 200 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 ZNF396Q96N95 335 aaPredicted RBP27.74■■■□□ 2.03
NPAS3-211ENST00000551634 PAXBP1Q9Y5B6 917 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 NDUFB9Q9Y6M9 179 aa27.74■■■□□ 2.03
NPAS3-211ENST00000551634 FAM177BA6PVY3 158 aa27.73■■■□□ 2.03
NPAS3-211ENST00000551634 EXOSC10Q01780 885 aaKnown RBP27.73■■■□□ 2.03
NPAS3-211ENST00000551634 TTC5Q8N0Z6 440 aa27.73■■■□□ 2.03
NPAS3-211ENST00000551634 GPR108Q9NPR9 543 aa27.73■■■□□ 2.03
NPAS3-211ENST00000551634 CCAR1Q8IX12 1150 aaKnown RBP27.73■■■□□ 2.03
NPAS3-211ENST00000551634 LAMA4Q16363 1823 aa27.73■■■□□ 2.03
NPAS3-211ENST00000551634 ZNF142P52746 1687 aaPredicted RBP27.72■■■□□ 2.03
NPAS3-211ENST00000551634 CACTINQ8WUQ7 758 aaKnown RBP27.72■■■□□ 2.03
NPAS3-211ENST00000551634 FMNL2Q96PY5 1086 aa27.72■■■□□ 2.03
NPAS3-211ENST00000551634 CCDC73Q6ZRK6 1079 aa27.72■■■□□ 2.03
NPAS3-211ENST00000551634 ARFGEF2Q9Y6D5 1785 aa27.72■■■□□ 2.03
NPAS3-211ENST00000551634 PTPDC1A2A3K4 754 aa27.71■■■□□ 2.03
NPAS3-211ENST00000551634 LRRC2Q9BYS8 371 aa27.71■■■□□ 2.03
NPAS3-211ENST00000551634 CTDNEP1O95476 244 aa27.71■■■□□ 2.03
NPAS3-211ENST00000551634 CHGBP05060 677 aa27.71■■■□□ 2.03
NPAS3-211ENST00000551634 TNNT1P13805 278 aa27.71■■■□□ 2.03
NPAS3-211ENST00000551634 PLBD2Q8NHP8 589 aa27.71■■■□□ 2.03
NPAS3-211ENST00000551634 DCAF5Q96JK2 942 aa27.7■■■□□ 2.02
NPAS3-211ENST00000551634 C16orf45Q96MC5 204 aaPredicted RBP27.7■■■□□ 2.02
NPAS3-211ENST00000551634 SALL1Q9NSC2 1324 aa27.7■■■□□ 2.02
NPAS3-211ENST00000551634 UTP14CQ5TAP6 766 aaKnown RBP27.69■■■□□ 2.02
NPAS3-211ENST00000551634 ZNF274Q96GC6 653 aaPredicted RBP27.69■■■□□ 2.02
NPAS3-211ENST00000551634 PAG1Q9NWQ8 432 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 NLRP2Q9NX02 1062 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 SNW1Q13573 536 aaKnown RBP27.69■■■□□ 2.02
NPAS3-211ENST00000551634 ZMYM1Q5SVZ6 1142 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 ANO10Q9NW15 660 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 TMEM94Q12767 1356 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 KIF1AQ12756 1690 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 KINO60870 393 aaKnown RBP27.69■■■□□ 2.02
NPAS3-211ENST00000551634 FAM160A1Q05DH4 1040 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 CCDC144BQ3MJ40 725 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 LMBR1LQ6UX01 489 aa27.69■■■□□ 2.02
NPAS3-211ENST00000551634 CCDC144CPQ8IYA2 1237 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms