RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 CNNM1Q9NRU3 951 aa21.47■■□□□ 1.03
BRF1-217ENST00000550375 NSFL1CQ9UNZ2 370 aaKnown RBP21.47■■□□□ 1.03
BRF1-217ENST00000550375 CHD4Q14839 1912 aa21.46■■□□□ 1.03
BRF1-217ENST00000550375 ATP8B2P98198 1209 aa21.46■■□□□ 1.03
BRF1-217ENST00000550375 MPNDQ8N594 471 aa21.46■■□□□ 1.03
BRF1-217ENST00000550375 ANKIB1Q9P2G1 1089 aa21.46■■□□□ 1.03
BRF1-217ENST00000550375 MINPP1Q9UNW1 487 aa21.46■■□□□ 1.03
BRF1-217ENST00000550375 PTPN12Q05209 780 aaKnown RBP21.45■■□□□ 1.02
BRF1-217ENST00000550375 CEP85Q6P2H3 762 aa21.45■■□□□ 1.02
BRF1-217ENST00000550375 DPP8Q6V1X1 898 aaPredicted RBP21.45■■□□□ 1.02
BRF1-217ENST00000550375 SIL1Q9H173 461 aa21.45■■□□□ 1.02
BRF1-217ENST00000550375 TAOK3Q9H2K8 898 aa21.45■■□□□ 1.02
BRF1-217ENST00000550375 PA2G4Q9UQ80 394 aaKnown RBP21.45■■□□□ 1.02
BRF1-217ENST00000550375 SNED1Q8TER0 1413 aa21.45■■□□□ 1.02
BRF1-217ENST00000550375 SBF1O95248 1867 aa21.44■■□□□ 1.02
BRF1-217ENST00000550375 A0A1B0GUL6 1792 aa21.44■■□□□ 1.02
BRF1-217ENST00000550375 LRRC24Q50LG9 513 aa21.44■■□□□ 1.02
BRF1-217ENST00000550375 FKBP4Q02790 459 aaKnown RBP eCLIP21.43■■□□□ 1.02
BRF1-217ENST00000550375 CHRNDQ07001 517 aa21.43■■□□□ 1.02
BRF1-217ENST00000550375 GRIPAP1Q4V328 841 aa21.43■■□□□ 1.02
BRF1-217ENST00000550375 HELBQ8NG08 1087 aaPredicted RBP21.43■■□□□ 1.02
BRF1-217ENST00000550375 EXOC6Q8TAG9 804 aa21.43■■□□□ 1.02
BRF1-217ENST00000550375 LTBP1Q14766 1721 aa21.42■■□□□ 1.02
BRF1-217ENST00000550375 XDHP47989 1333 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 C6orf229H3BNL8 230 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 EYA2O00167 538 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 TAF5LO75529 589 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 PRELPP51888 382 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 POLA2Q14181 598 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 PSMD1Q99460 953 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 ANKRD2Q9GZV1 360 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 COPRSQ9NQ92 184 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 ZNF277Q9NRM2 450 aaPredicted RBP21.41■■□□□ 1.02
BRF1-217ENST00000550375 RIPOR2Q9Y4F9 1068 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 DUOX1Q9NRD9 1551 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 LTBP3Q9NS15 1303 aa21.41■■□□□ 1.02
BRF1-217ENST00000550375 UFL1O94874 794 aa21.4■■□□□ 1.02
BRF1-217ENST00000550375 RPAP2Q8IXW5 612 aaPredicted RBP21.4■■□□□ 1.02
BRF1-217ENST00000550375 SSH3Q8TE77 659 aa21.4■■□□□ 1.02
BRF1-217ENST00000550375 GPR101Q96P66 508 aaPredicted RBP21.4■■□□□ 1.02
BRF1-217ENST00000550375 POLLQ9UGP5 575 aa21.4■■□□□ 1.02
BRF1-217ENST00000550375 GGA1Q9UJY5 639 aa21.4■■□□□ 1.02
BRF1-217ENST00000550375 WTIPA6NIX2 430 aaPredicted RBP21.39■■□□□ 1.02
BRF1-217ENST00000550375 SUPT20HQ8NEM7 779 aa21.39■■□□□ 1.02
BRF1-217ENST00000550375 TBC1D16Q8TBP0 767 aa21.39■■□□□ 1.02
BRF1-217ENST00000550375 PODXL2Q9NZ53 605 aa21.39■■□□□ 1.02
BRF1-217ENST00000550375 LMNB1P20700 586 aa21.38■■□□□ 1.01
BRF1-217ENST00000550375 METTL24Q5JXM2 366 aa21.38■■□□□ 1.01
BRF1-217ENST00000550375 ATG9AQ7Z3C6 839 aa21.38■■□□□ 1.01
BRF1-217ENST00000550375 SIRT2Q8IXJ6 389 aa21.38■■□□□ 1.01
BRF1-217ENST00000550375 RTFDC1Q9BY42 306 aaPredicted RBP21.38■■□□□ 1.01
BRF1-217ENST00000550375 RNF181Q9P0P0 153 aa21.38■■□□□ 1.01
BRF1-217ENST00000550375 MROH5Q6ZUA9 1318 aa21.38■■□□□ 1.01
BRF1-217ENST00000550375 RIMBP2O15034 1052 aa21.37■■□□□ 1.01
BRF1-217ENST00000550375 ATP2B4P23634 1241 aa21.37■■□□□ 1.01
BRF1-217ENST00000550375 KCNJ4P48050 445 aa21.37■■□□□ 1.01
BRF1-217ENST00000550375 C9orf131Q5VYM1 1079 aa21.37■■□□□ 1.01
BRF1-217ENST00000550375 DICER1Q9UPY3 1922 aaKnown RBP21.37■■□□□ 1.01
BRF1-217ENST00000550375 SNAP23O00161 211 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 SURF6O75683 361 aaKnown RBP21.36■■□□□ 1.01
BRF1-217ENST00000550375 CIAO1O76071 339 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 IARSP41252 1262 aaKnown RBP21.36■■□□□ 1.01
BRF1-217ENST00000550375 AOC3Q16853 763 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 PCDHB15Q9Y5E8 787 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 PPIP5K2O43314 1243 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 HMMRO75330 724 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 IL15P40933 162 aaPredicted RBP21.36■■□□□ 1.01
BRF1-217ENST00000550375 G3BP1Q13283 466 aaKnown RBP eCLIP21.36■■□□□ 1.01
BRF1-217ENST00000550375 WASHC4Q2M389 1173 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 FBXO3Q9UK99 471 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 LEMD3Q9Y2U8 911 aa21.36■■□□□ 1.01
BRF1-217ENST00000550375 ZNF804BA4D1E1 1349 aa21.35■■□□□ 1.01
BRF1-217ENST00000550375 OS9Q13438 667 aaPredicted RBP21.35■■□□□ 1.01
BRF1-217ENST00000550375 LARGE2Q8N3Y3 721 aa21.35■■□□□ 1.01
BRF1-217ENST00000550375 EYA3Q99504 573 aa21.35■■□□□ 1.01
BRF1-217ENST00000550375 TIAM2Q8IVF5 1701 aa21.34■■□□□ 1.01
BRF1-217ENST00000550375 PDE8BO95263 885 aa21.33■■□□□ 1
BRF1-217ENST00000550375 KLRK1P26718 216 aa21.33■■□□□ 1
BRF1-217ENST00000550375 VGLL2Q8N8G2 317 aa21.33■■□□□ 1
BRF1-217ENST00000550375 ZC3H12CQ9C0D7 883 aaKnown RBP21.33■■□□□ 1
BRF1-217ENST00000550375 CEP126Q9P2H0 1117 aa21.33■■□□□ 1
BRF1-217ENST00000550375 EXOC6BQ9Y2D4 811 aa21.33■■□□□ 1
BRF1-217ENST00000550375 COL4A5P29400 1685 aa21.32■■□□□ 1
BRF1-217ENST00000550375 KIAA2012Q0VF49 1180 aa21.32■■□□□ 1
BRF1-217ENST00000550375 TFCP2Q12800 502 aa21.32■■□□□ 1
BRF1-217ENST00000550375 AAMPQ13685 434 aa21.31■■□□□ 1
BRF1-217ENST00000550375 DOK7Q18PE1 504 aa21.31■■□□□ 1
BRF1-217ENST00000550375 JDP2Q8WYK2 163 aa21.31■■□□□ 1
BRF1-217ENST00000550375 VPS33BQ9H267 617 aa21.31■■□□□ 1
BRF1-217ENST00000550375 NOP58Q9Y2X3 529 aaKnown RBP21.31■■□□□ 1
BRF1-217ENST00000550375 G3V3G9 751 aa21.3■■□□□ 1
BRF1-217ENST00000550375 UBE4AQ14139 1066 aa21.3■■□□□ 1
BRF1-217ENST00000550375 DCAF8Q5TAQ9 597 aa21.3■■□□□ 1
BRF1-217ENST00000550375 TXNRD3Q86VQ6 643 aa21.3■■□□□ 1
BRF1-217ENST00000550375 NIM1KQ8IY84 436 aa21.3■■□□□ 1
BRF1-217ENST00000550375 MED23Q9ULK4 1368 aa21.3■■□□□ 1
BRF1-217ENST00000550375 APBB1O00213 710 aa21.29■■□□□ 1
BRF1-217ENST00000550375 SASH1O94885 1247 aa21.29■■□□□ 1
BRF1-217ENST00000550375 PUM3Q15397 648 aaKnown RBP21.29■■□□□ 1
BRF1-217ENST00000550375 DBNDD1Q9H9R9 158 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms