RNA–Protein interactions for RNA: ENST00000546489.5

CDK4-203, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-203ENST00000546489 RTFDC1Q9BY42 306 aaPredicted RBP16.4■□□□□ 0.22
CDK4-203ENST00000546489 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
CDK4-203ENST00000546489 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
CDK4-203ENST00000546489 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
CDK4-203ENST00000546489 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
CDK4-203ENST00000546489 GPSM2P81274 684 aa16.39■□□□□ 0.21
CDK4-203ENST00000546489 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
CDK4-203ENST00000546489 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
CDK4-203ENST00000546489 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
CDK4-203ENST00000546489 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
CDK4-203ENST00000546489 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
CDK4-203ENST00000546489 XDHP47989 1333 aa16.38■□□□□ 0.21
CDK4-203ENST00000546489 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
CDK4-203ENST00000546489 PTPN12Q05209 780 aaKnown RBP16.37■□□□□ 0.21
CDK4-203ENST00000546489 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
CDK4-203ENST00000546489 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
CDK4-203ENST00000546489 VPS33BQ9H267 617 aa16.37■□□□□ 0.21
CDK4-203ENST00000546489 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
CDK4-203ENST00000546489 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
CDK4-203ENST00000546489 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 CHRNDQ07001 517 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 ZNF277Q9NRM2 450 aaPredicted RBP16.36■□□□□ 0.21
CDK4-203ENST00000546489 RNF181Q9P0P0 153 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 ANKIB1Q9P2G1 1089 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
CDK4-203ENST00000546489 COL4A5P29400 1685 aa16.36■□□□□ 0.21
CDK4-203ENST00000546489 PSME4Q14997 1843 aa16.35■□□□□ 0.21
CDK4-203ENST00000546489 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
CDK4-203ENST00000546489 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
CDK4-203ENST00000546489 PUS3Q9BZE2 481 aaKnown RBP16.35■□□□□ 0.21
CDK4-203ENST00000546489 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
CDK4-203ENST00000546489 ZC3H4Q9UPT8 1303 aaKnown RBP16.35■□□□□ 0.21
CDK4-203ENST00000546489 C6orf229H3BNL8 230 aa16.34■□□□□ 0.21
CDK4-203ENST00000546489 EYA2O00167 538 aa16.34■□□□□ 0.21
CDK4-203ENST00000546489 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
CDK4-203ENST00000546489 KIAA2012Q0VF49 1180 aa16.34■□□□□ 0.21
CDK4-203ENST00000546489 POLA2Q14181 598 aa16.34■□□□□ 0.21
CDK4-203ENST00000546489 LRRC24Q50LG9 513 aa16.34■□□□□ 0.21
CDK4-203ENST00000546489 LEMD3Q9Y2U8 911 aa16.34■□□□□ 0.21
CDK4-203ENST00000546489 MROH5Q6ZUA9 1318 aa16.34■□□□□ 0.21
CDK4-203ENST00000546489 PPIP5K2O43314 1243 aa16.33■□□□□ 0.2
CDK4-203ENST00000546489 UFL1O94874 794 aa16.33■□□□□ 0.2
CDK4-203ENST00000546489 CEP85Q6P2H3 762 aa16.33■□□□□ 0.2
CDK4-203ENST00000546489 SSH3Q8TE77 659 aa16.33■□□□□ 0.2
CDK4-203ENST00000546489 EYA3Q99504 573 aa16.33■□□□□ 0.2
CDK4-203ENST00000546489 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 TAF5LO75529 589 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 CIAO1O76071 339 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 AOC3Q16853 763 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 RPAP2Q8IXW5 612 aaPredicted RBP16.32■□□□□ 0.2
CDK4-203ENST00000546489 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 MED23Q9ULK4 1368 aa16.32■□□□□ 0.2
CDK4-203ENST00000546489 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
CDK4-203ENST00000546489 SCN9AQ15858 1988 aa16.31■□□□□ 0.2
CDK4-203ENST00000546489 ZNF646O15015 1829 aaPredicted RBP16.31■□□□□ 0.2
CDK4-203ENST00000546489 WTIPA6NIX2 430 aaPredicted RBP16.31■□□□□ 0.2
CDK4-203ENST00000546489 VGLL2Q8N8G2 317 aa16.31■□□□□ 0.2
CDK4-203ENST00000546489 HELBQ8NG08 1087 aaPredicted RBP16.31■□□□□ 0.2
CDK4-203ENST00000546489 JDP2Q8WYK2 163 aa16.31■□□□□ 0.2
CDK4-203ENST00000546489 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
CDK4-203ENST00000546489 MYH13Q9UKX3 1938 aa16.3■□□□□ 0.2
CDK4-203ENST00000546489 YY1P25490 414 aa16.3■□□□□ 0.2
CDK4-203ENST00000546489 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
CDK4-203ENST00000546489 METTL24Q5JXM2 366 aa16.3■□□□□ 0.2
CDK4-203ENST00000546489 GPR101Q96P66 508 aaPredicted RBP16.3■□□□□ 0.2
CDK4-203ENST00000546489 ZC3H12CQ9C0D7 883 aaKnown RBP16.3■□□□□ 0.2
CDK4-203ENST00000546489 SIL1Q9H173 461 aa16.3■□□□□ 0.2
CDK4-203ENST00000546489 IRS2Q9Y4H2 1338 aa16.29■□□□□ 0.2
CDK4-203ENST00000546489 FZD9O00144 591 aa16.29■□□□□ 0.2
CDK4-203ENST00000546489 RIMBP2O15034 1052 aa16.29■□□□□ 0.2
CDK4-203ENST00000546489 PDE8BO95263 885 aa16.29■□□□□ 0.2
CDK4-203ENST00000546489 KCNJ4P48050 445 aa16.29■□□□□ 0.2
CDK4-203ENST00000546489 UBE4AQ14139 1066 aa16.29■□□□□ 0.2
CDK4-203ENST00000546489 C15orf52Q6ZUT6 534 aaKnown RBP16.29■□□□□ 0.2
CDK4-203ENST00000546489 NIM1KQ8IY84 436 aa16.29■□□□□ 0.2
CDK4-203ENST00000546489 SIRT2Q8IXJ6 389 aa16.28■□□□□ 0.2
CDK4-203ENST00000546489 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
CDK4-203ENST00000546489 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
CDK4-203ENST00000546489 WDR90Q96KV7 1748 aa16.28■□□□□ 0.2
CDK4-203ENST00000546489 SCN4AP35499 1836 aa16.27■□□□□ 0.2
CDK4-203ENST00000546489 SNAP23O00161 211 aa16.27■□□□□ 0.2
CDK4-203ENST00000546489 HMMRO75330 724 aa16.27■□□□□ 0.2
CDK4-203ENST00000546489 AAMPQ13685 434 aa16.27■□□□□ 0.2
CDK4-203ENST00000546489 TXNRD3Q86VQ6 643 aa16.27■□□□□ 0.2
CDK4-203ENST00000546489 FGFR2P21802 821 aa16.26■□□□□ 0.19
CDK4-203ENST00000546489 KLRK1P26718 216 aa16.26■□□□□ 0.19
CDK4-203ENST00000546489 G3BP1Q13283 466 aaKnown RBP eCLIP16.26■□□□□ 0.194e-8■□□□□ 10.3
CDK4-203ENST00000546489 DBNDD1Q9H9R9 158 aa16.26■□□□□ 0.19
CDK4-203ENST00000546489 CEP126Q9P2H0 1117 aa16.26■□□□□ 0.19
CDK4-203ENST00000546489 GLTPD2A6NH11 291 aa16.25■□□□□ 0.19
CDK4-203ENST00000546489 YDJCA8MPS7 323 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms