RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ADAMTS13Q76LX8 1427 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 CAVIN2O95810 425 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 IL2RBP14784 551 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 LEKR1Q6ZMV7 388 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 CEP131Q9UPN4 1083 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 GADD45BO75293 160 aaPredicted RBP6.74□□□□□ -1.33
VPS50-220ENST00000544910 SSRP1Q08945 709 aaKnown RBP6.74□□□□□ -1.33
VPS50-220ENST00000544910 MAP3K12Q12852 859 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 CCDC112Q8NEF3 446 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 FAM200AQ8TCP9 573 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 UBAC1Q9BSL1 405 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 LRRC2Q9BYS8 371 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 TM6SF1Q9BZW5 370 aa6.74□□□□□ -1.33
VPS50-220ENST00000544910 USP8P40818 1118 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 RAI14Q9P0K7 980 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 GOLGA8AA7E2F4 631 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 MARCH6O60337 910 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 PHKG2P15735 406 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 GPTP24298 496 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 UNC5CLQ8IV45 518 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 NAPBQ9H115 298 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 SNRKQ9NRH2 765 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 LRP2BPQ9P2M1 347 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 NOL7Q9UMY1 257 aaKnown RBP6.73□□□□□ -1.33
VPS50-220ENST00000544910 SLC12A7Q9Y666 1083 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 UQCRFS1P1P0C7P4 283 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 HAND2P61296 217 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 KLHDC4Q8TBB5 520 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 USP16Q9Y5T5 823 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 NEMFO60524 1076 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 OFD1O75665 1012 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 PTH1RQ03431 593 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 TULP1O00294 542 aaPredicted RBP6.73□□□□□ -1.33
VPS50-220ENST00000544910 CCDC129Q6ZRS4 1044 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 PPP1R9BQ96SB3 815 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 TMEM63CQ9P1W3 806 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 ZNF652Q9Y2D9 606 aa6.73□□□□□ -1.33
VPS50-220ENST00000544910 KNDC1Q76NI1 1749 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 ATP2B1P20020 1258 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 METAP2P50579 478 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS50-220ENST00000544910 TYRO3Q06418 890 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 APOBRQ0VD83 1088 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 LDHAL6AQ6ZMR3 332 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 DHX32Q7L7V1 743 aaKnown RBP6.72□□□□□ -1.33
VPS50-220ENST00000544910 KIF2CQ99661 725 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 ZSWIM6Q9HCJ5 1215 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 DACT1Q9NYF0 836 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 KLF18A0A0U1RQI7 1052 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 DYNC1I1O14576 645 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 FILIP1LQ4L180 1135 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 PRIMPOLQ96LW4 560 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 PCMTD1Q96MG8 357 aaPredicted RBP6.72□□□□□ -1.33
VPS50-220ENST00000544910 ZNF830Q96NB3 372 aaPredicted RBP6.72□□□□□ -1.33
VPS50-220ENST00000544910 ZMYND15Q9H091 742 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 ATP10DQ9P241 1426 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 PTPDC1A2A3K4 754 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 ATP2B3Q16720 1220 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 ARHGEF25Q86VW2 580 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 RUFY1Q96T51 708 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 BCL11BQ9C0K0 894 aaPredicted RBP6.72□□□□□ -1.33
VPS50-220ENST00000544910 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS50-220ENST00000544910 IPO7O95373 1038 aaKnown RBP6.72□□□□□ -1.33
VPS50-220ENST00000544910 ATP5JP18859 108 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 TXLNAP40222 546 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 CUL4AQ13619 759 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 PROSER3Q2NL68 480 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 GAS2L3Q86XJ1 694 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 PI4K2BQ8TCG2 481 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 ORC3Q9UBD5 711 aaPredicted RBP6.72□□□□□ -1.33
VPS50-220ENST00000544910 NCOA3Q9Y6Q9 1424 aa6.72□□□□□ -1.33
VPS50-220ENST00000544910 H0YHG0 523 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 ZNF165P49910 485 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 NOLC1Q14978 699 aaKnown RBP eCLIP6.71□□□□□ -1.33
VPS50-220ENST00000544910 ME3Q16798 604 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 SMARCE1Q969G3 411 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 DBNDD2Q9BQY9 259 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 LLPHQ9BRT6 129 aaKnown RBP6.71□□□□□ -1.33
VPS50-220ENST00000544910 MON2Q7Z3U7 1717 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 TMEM67Q5HYA8 995 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 FILIP1Q7Z7B0 1213 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 CCDC191Q8NCU4 936 aa6.71□□□□□ -1.33
VPS50-220ENST00000544910 RNF41Q9H4P4 317 aaPredicted RBP6.71□□□□□ -1.33
VPS50-220ENST00000544910 CEP170BQ9Y4F5 1589 aaPredicted RBP6.71□□□□□ -1.33
VPS50-220ENST00000544910 CCDC196A0A1B0GTZ2 297 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 EYA2O00167 538 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 IFIT3O14879 490 aaKnown RBP6.71□□□□□ -1.34
VPS50-220ENST00000544910 PRC1O43663 620 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 POLR3DP05423 398 aaPredicted RBP6.71□□□□□ -1.34
VPS50-220ENST00000544910 KCNG4Q8TDN1 519 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 EXOC5O00471 708 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 GSDMDP57764 484 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 ATL3Q6DD88 541 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 CDC37L1Q7L3B6 337 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 DEF6Q9H4E7 631 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 A0A0D9SFI3 127 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 KIF2AO00139 706 aaPredicted RBP6.71□□□□□ -1.34
VPS50-220ENST00000544910 CAVIN4Q5BKX8 364 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 RAB11FIP4Q86YS3 637 aa6.71□□□□□ -1.34
VPS50-220ENST00000544910 MRPS27Q92552 414 aaKnown RBP6.71□□□□□ -1.34
VPS50-220ENST00000544910 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms