RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 HYPKQ9NX55 129 aa20.99■□□□□ 0.95
DDX55-212ENST00000544738 GRAPQ13588 217 aa20.98■□□□□ 0.95
DDX55-212ENST00000544738 PKN2Q16513 984 aaKnown RBP20.98■□□□□ 0.95
DDX55-212ENST00000544738 ANKRD13DQ6ZTN6 518 aa20.98■□□□□ 0.95
DDX55-212ENST00000544738 NLRP10Q86W26 655 aa20.98■□□□□ 0.95
DDX55-212ENST00000544738 SULF1Q8IWU6 871 aa20.98■□□□□ 0.95
DDX55-212ENST00000544738 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
DDX55-212ENST00000544738 GRAPLQ8TC17 118 aaPredicted RBP20.98■□□□□ 0.95
DDX55-212ENST00000544738 POLR2AP24928 1970 aaKnown RBP20.97■□□□□ 0.95
DDX55-212ENST00000544738 REM2Q8IYK8 340 aaPredicted RBP20.97■□□□□ 0.95
DDX55-212ENST00000544738 GCC1Q96CN9 775 aa20.97■□□□□ 0.95
DDX55-212ENST00000544738 CHMP4AQ9BY43 222 aa20.97■□□□□ 0.95
DDX55-212ENST00000544738 KCNQ5Q9NR82 932 aa20.97■□□□□ 0.95
DDX55-212ENST00000544738 AKAP11Q9UKA4 1901 aa20.96■□□□□ 0.95
DDX55-212ENST00000544738 ZNF316A6NFI3 1004 aaPredicted RBP20.96■□□□□ 0.95
DDX55-212ENST00000544738 TBC1D8O95759 1140 aa20.96■□□□□ 0.95
DDX55-212ENST00000544738 TRMT112Q9UI30 125 aaKnown RBP20.96■□□□□ 0.95
DDX55-212ENST00000544738 NSFL1CQ9UNZ2 370 aaKnown RBP20.96■□□□□ 0.95
DDX55-212ENST00000544738 C6orf229H3BNL8 230 aa20.95■□□□□ 0.94
DDX55-212ENST00000544738 RPS12P25398 132 aaKnown RBP20.95■□□□□ 0.94
DDX55-212ENST00000544738 DOK7Q18PE1 504 aa20.95■□□□□ 0.94
DDX55-212ENST00000544738 KIF4BQ2VIQ3 1234 aa20.95■□□□□ 0.94
DDX55-212ENST00000544738 RASAL3Q86YV0 1011 aa20.95■□□□□ 0.94
DDX55-212ENST00000544738 ZNF296Q8WUU4 475 aaPredicted RBP20.95■□□□□ 0.94
DDX55-212ENST00000544738 ZNF428Q96B54 188 aa20.95■□□□□ 0.94
DDX55-212ENST00000544738 CDCA5Q96FF9 252 aa20.95■□□□□ 0.94
DDX55-212ENST00000544738 GGA3Q9NZ52 723 aa20.95■□□□□ 0.94
DDX55-212ENST00000544738 SH3TC1Q8TE82 1336 aa20.95■□□□□ 0.94
DDX55-212ENST00000544738 ASTN2O75129 1339 aaPredicted RBP20.94■□□□□ 0.94
DDX55-212ENST00000544738 ANKRD36CQ5JPF3 1778 aa20.94■□□□□ 0.94
DDX55-212ENST00000544738 CCDC184Q52MB2 194 aa20.93■□□□□ 0.94
DDX55-212ENST00000544738 ANP32CO43423 234 aa20.92■□□□□ 0.94
DDX55-212ENST00000544738 ECE2O60344 883 aa20.92■□□□□ 0.94
DDX55-212ENST00000544738 HABP4Q5JVS0 413 aaKnown RBP20.92■□□□□ 0.94
DDX55-212ENST00000544738 TMC4Q7Z404 712 aa20.92■□□□□ 0.94
DDX55-212ENST00000544738 ELL2O00472 640 aaPredicted RBP20.91■□□□□ 0.94
DDX55-212ENST00000544738 CCDC27Q2M243 656 aa20.91■□□□□ 0.94
DDX55-212ENST00000544738 POLLQ9UGP5 575 aa20.91■□□□□ 0.94
DDX55-212ENST00000544738 ISCA1Q9BUE6 129 aa20.9■□□□□ 0.94
DDX55-212ENST00000544738 RTL9Q8NET4 1388 aa20.89■□□□□ 0.93
DDX55-212ENST00000544738 GPSM2P81274 684 aa20.89■□□□□ 0.93
DDX55-212ENST00000544738 GOLGA2Q08379 1002 aa20.89■□□□□ 0.93
DDX55-212ENST00000544738 TRIM28Q13263 835 aaKnown RBP20.89■□□□□ 0.93
DDX55-212ENST00000544738 SCARF1Q14162 830 aa20.89■□□□□ 0.93
DDX55-212ENST00000544738 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
DDX55-212ENST00000544738 ANGEL2Q5VTE6 544 aaKnown RBP20.89■□□□□ 0.93
DDX55-212ENST00000544738 CCDC30Q5VVM6 783 aa20.89■□□□□ 0.93
DDX55-212ENST00000544738 FBXO46Q6PJ61 603 aaPredicted RBP20.89■□□□□ 0.93
DDX55-212ENST00000544738 MOB2Q70IA6 237 aa20.89■□□□□ 0.93
DDX55-212ENST00000544738 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
DDX55-212ENST00000544738 MKI67P46013 3256 aaKnown RBP20.89■□□□□ 0.93
DDX55-212ENST00000544738 G3V3G9 751 aa20.88■□□□□ 0.93
DDX55-212ENST00000544738 UBE2Q2LH0YL09 131 aa20.88■□□□□ 0.93
DDX55-212ENST00000544738 DCAF8Q5TAQ9 597 aa20.88■□□□□ 0.93
DDX55-212ENST00000544738 RIC3Q7Z5B4 369 aa20.88■□□□□ 0.93
DDX55-212ENST00000544738 C8orf58Q8NAV2 365 aa20.88■□□□□ 0.93
DDX55-212ENST00000544738 CELF1Q92879 486 aaKnown RBP20.88■□□□□ 0.93
DDX55-212ENST00000544738 EYA3Q99504 573 aa20.88■□□□□ 0.93
DDX55-212ENST00000544738 ATP5J2-PTCD1G3V325 749 aa20.87■□□□□ 0.93
DDX55-212ENST00000544738 GPR25O00155 361 aa20.87■□□□□ 0.93
DDX55-212ENST00000544738 VIL1P09327 827 aaKnown RBP20.87■□□□□ 0.93
DDX55-212ENST00000544738 FKBP1BP68106 108 aa20.86■□□□□ 0.93
DDX55-212ENST00000544738 MKRN3Q13064 507 aaKnown RBP20.86■□□□□ 0.93
DDX55-212ENST00000544738 WWC1Q8IX03 1113 aa20.86■□□□□ 0.93
DDX55-212ENST00000544738 FAM89AQ96GI7 184 aa20.86■□□□□ 0.93
DDX55-212ENST00000544738 ZC3H12CQ9C0D7 883 aaKnown RBP20.86■□□□□ 0.93
DDX55-212ENST00000544738 PHAXQ9H814 394 aaKnown RBP20.86■□□□□ 0.93
DDX55-212ENST00000544738 SCAF8Q9UPN6 1271 aaKnown RBP20.86■□□□□ 0.93
DDX55-212ENST00000544738 TAF1P21675 1872 aa20.86■□□□□ 0.93
DDX55-212ENST00000544738 DUOX1Q9NRD9 1551 aa20.85■□□□□ 0.93
DDX55-212ENST00000544738 DDX58O95786 925 aaKnown RBP20.85■□□□□ 0.93
DDX55-212ENST00000544738 HSP90B1P14625 803 aaKnown RBP20.85■□□□□ 0.93
DDX55-212ENST00000544738 IL16Q14005 1332 aa20.84■□□□□ 0.93
DDX55-212ENST00000544738 TTLL12Q14166 644 aaPredicted RBP20.84■□□□□ 0.93
DDX55-212ENST00000544738 SF3B3Q15393 1217 aaKnown RBP20.84■□□□□ 0.93
DDX55-212ENST00000544738 PRAMEF18Q5VWM3 479 aa20.84■□□□□ 0.93
DDX55-212ENST00000544738 TBC1D16Q8TBP0 767 aa20.84■□□□□ 0.93
DDX55-212ENST00000544738 LAMB2P55268 1798 aa20.84■□□□□ 0.93
DDX55-212ENST00000544738 FKTNO75072 461 aa20.83■□□□□ 0.93
DDX55-212ENST00000544738 TM4SF4P48230 202 aa20.83■□□□□ 0.93
DDX55-212ENST00000544738 TSPYL6Q8N831 410 aa20.82■□□□□ 0.92
DDX55-212ENST00000544738 ZBTB38Q8NAP3 1195 aaPredicted RBP20.82■□□□□ 0.92
DDX55-212ENST00000544738 CCDC191Q8NCU4 936 aa20.82■□□□□ 0.92
DDX55-212ENST00000544738 TSR2Q969E8 191 aaKnown RBP20.82■□□□□ 0.92
DDX55-212ENST00000544738 STK31Q9BXU1 1019 aa20.82■□□□□ 0.92
DDX55-212ENST00000544738 IRS4O14654 1257 aaPredicted RBP20.81■□□□□ 0.92
DDX55-212ENST00000544738 ZNF280AP59817 542 aaPredicted RBP20.81■□□□□ 0.92
DDX55-212ENST00000544738 RTL5Q5HYW3 569 aaPredicted RBP20.81■□□□□ 0.92
DDX55-212ENST00000544738 R3HDMLQ9H3Y0 253 aa20.81■□□□□ 0.92
DDX55-212ENST00000544738 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
DDX55-212ENST00000544738 RSBN1LQ6PCB5 846 aaPredicted RBP20.8■□□□□ 0.92
DDX55-212ENST00000544738 AGBL3Q8NEM8 1001 aa20.8■□□□□ 0.92
DDX55-212ENST00000544738 MYD88Q99836 296 aa20.8■□□□□ 0.92
DDX55-212ENST00000544738 METTL22Q9BUU2 404 aaPredicted RBP20.8■□□□□ 0.92
DDX55-212ENST00000544738 MYOZ2Q9NPC6 264 aa20.8■□□□□ 0.92
DDX55-212ENST00000544738 USP17L8P0C7I0 530 aa20.79■□□□□ 0.92
DDX55-212ENST00000544738 TWISTNBQ3B726 338 aaPredicted RBP20.79■□□□□ 0.92
DDX55-212ENST00000544738 NOM1Q5C9Z4 860 aaKnown RBP20.79■□□□□ 0.92
DDX55-212ENST00000544738 ANKIB1Q9P2G1 1089 aa20.79■□□□□ 0.92
DDX55-212ENST00000544738 DDX60Q8IY21 1712 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms