RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SOX10P56693 466 aa15.4■□□□□ 0.06
GABPB1-206ENST00000543881 RBM26Q5T8P6 1007 aaKnown RBP15.4■□□□□ 0.06
GABPB1-206ENST00000543881 PLBD2Q8NHP8 589 aa15.4■□□□□ 0.06
GABPB1-206ENST00000543881 IFT57Q9NWB7 429 aa15.4■□□□□ 0.06
GABPB1-206ENST00000543881 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
GABPB1-206ENST00000543881 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
GABPB1-206ENST00000543881 RIMBP2O15034 1052 aa15.39■□□□□ 0.05
GABPB1-206ENST00000543881 TRPA1O75762 1119 aa15.39■□□□□ 0.05
GABPB1-206ENST00000543881 RPS12P25398 132 aaKnown RBP15.39■□□□□ 0.05
GABPB1-206ENST00000543881 ANKRD13DQ6ZTN6 518 aa15.39■□□□□ 0.05
GABPB1-206ENST00000543881 ISCA1Q9BUE6 129 aa15.39■□□□□ 0.05
GABPB1-206ENST00000543881 DDX60Q8IY21 1712 aaKnown RBP15.38■□□□□ 0.05
GABPB1-206ENST00000543881 C6orf229H3BNL8 230 aa15.38■□□□□ 0.05
GABPB1-206ENST00000543881 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
GABPB1-206ENST00000543881 KCNQ5Q9NR82 932 aa15.38■□□□□ 0.05
GABPB1-206ENST00000543881 POLLQ9UGP5 575 aa15.38■□□□□ 0.05
GABPB1-206ENST00000543881 ATP5J2-PTCD1G3V325 749 aa15.37■□□□□ 0.05
GABPB1-206ENST00000543881 ECE2O60344 883 aa15.37■□□□□ 0.05
GABPB1-206ENST00000543881 GNAI1P63096 354 aa15.37■□□□□ 0.05
GABPB1-206ENST00000543881 KIF4BQ2VIQ3 1234 aa15.37■□□□□ 0.05
GABPB1-206ENST00000543881 C8orf58Q8NAV2 365 aa15.37■□□□□ 0.05
GABPB1-206ENST00000543881 CELF1Q92879 486 aaKnown RBP15.37■□□□□ 0.05
GABPB1-206ENST00000543881 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
GABPB1-206ENST00000543881 RTL9Q8NET4 1388 aa15.37■□□□□ 0.05
GABPB1-206ENST00000543881 SLC10A3P09131 477 aa15.36■□□□□ 0.05
GABPB1-206ENST00000543881 GPSM2P81274 684 aa15.36■□□□□ 0.05
GABPB1-206ENST00000543881 DOK7Q18PE1 504 aa15.36■□□□□ 0.05
GABPB1-206ENST00000543881 SULF1Q8IWU6 871 aa15.36■□□□□ 0.05
GABPB1-206ENST00000543881 CSRNP1Q96S65 589 aa15.36■□□□□ 0.05
GABPB1-206ENST00000543881 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
GABPB1-206ENST00000543881 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
GABPB1-206ENST00000543881 SF3B3Q15393 1217 aaKnown RBP15.35■□□□□ 0.05
GABPB1-206ENST00000543881 FAM89AQ96GI7 184 aa15.35■□□□□ 0.05
GABPB1-206ENST00000543881 EYA3Q99504 573 aa15.35■□□□□ 0.05
GABPB1-206ENST00000543881 GGA3Q9NZ52 723 aa15.35■□□□□ 0.05
GABPB1-206ENST00000543881 CTU1Q7Z7A3 348 aaKnown RBP15.34■□□□□ 0.05
GABPB1-206ENST00000543881 SCN9AQ15858 1988 aa15.34■□□□□ 0.05
GABPB1-206ENST00000543881 ASTN2O75129 1339 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-206ENST00000543881 COL4A1P02462 1669 aa15.34■□□□□ 0.05
GABPB1-206ENST00000543881 VIL1P09327 827 aaKnown RBP15.33■□□□□ 0.05
GABPB1-206ENST00000543881 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.05
GABPB1-206ENST00000543881 RTL5Q5HYW3 569 aaPredicted RBP15.33■□□□□ 0.05
GABPB1-206ENST00000543881 TSPYL6Q8N831 410 aa15.33■□□□□ 0.05
GABPB1-206ENST00000543881 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.05
GABPB1-206ENST00000543881 CDCA5Q96FF9 252 aa15.33■□□□□ 0.05
GABPB1-206ENST00000543881 TRIM28Q13263 835 aaKnown RBP15.33■□□□□ 0.04
GABPB1-206ENST00000543881 ZC3H12CQ9C0D7 883 aaKnown RBP15.33■□□□□ 0.04
GABPB1-206ENST00000543881 PRPF38BQ5VTL8 546 aaKnown RBP15.32■□□□□ 0.04
GABPB1-206ENST00000543881 RIC3Q7Z5B4 369 aa15.32■□□□□ 0.04
GABPB1-206ENST00000543881 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
GABPB1-206ENST00000543881 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
GABPB1-206ENST00000543881 TSR2Q969E8 191 aaKnown RBP15.32■□□□□ 0.04
GABPB1-206ENST00000543881 G3V3G9 751 aa15.31■□□□□ 0.04
GABPB1-206ENST00000543881 RPS8P62241 208 aaKnown RBP15.31■□□□□ 0.04
GABPB1-206ENST00000543881 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
GABPB1-206ENST00000543881 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
GABPB1-206ENST00000543881 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
GABPB1-206ENST00000543881 WWC1Q8IX03 1113 aa15.31■□□□□ 0.04
GABPB1-206ENST00000543881 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-206ENST00000543881 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-206ENST00000543881 SCARF1Q14162 830 aa15.3■□□□□ 0.04
GABPB1-206ENST00000543881 CCDC27Q2M243 656 aa15.3■□□□□ 0.04
GABPB1-206ENST00000543881 MYD88Q99836 296 aa15.3■□□□□ 0.04
GABPB1-206ENST00000543881 HPS5Q9UPZ3 1129 aa15.3■□□□□ 0.04
GABPB1-206ENST00000543881 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
GABPB1-206ENST00000543881 FKBP1BP68106 108 aa15.29■□□□□ 0.04
GABPB1-206ENST00000543881 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
GABPB1-206ENST00000543881 MRS2Q9HD23 443 aa15.29■□□□□ 0.04
GABPB1-206ENST00000543881 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
GABPB1-206ENST00000543881 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
GABPB1-206ENST00000543881 PAPPA2Q9BXP8 1791 aa15.29■□□□□ 0.04
GABPB1-206ENST00000543881 UFL1O94874 794 aa15.28■□□□□ 0.04
GABPB1-206ENST00000543881 PKN2Q16513 984 aaKnown RBP15.28■□□□□ 0.04
GABPB1-206ENST00000543881 RSBN1LQ6PCB5 846 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-206ENST00000543881 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-206ENST00000543881 AGBL3Q8NEM8 1001 aa15.28■□□□□ 0.04
GABPB1-206ENST00000543881 HDAC9Q9UKV0 1011 aa15.28■□□□□ 0.04
GABPB1-206ENST00000543881 JARID2Q92833 1246 aaPredicted RBP15.27■□□□□ 0.04
GABPB1-206ENST00000543881 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
GABPB1-206ENST00000543881 SEC31BQ9NQW1 1179 aa15.27■□□□□ 0.04
GABPB1-206ENST00000543881 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
GABPB1-206ENST00000543881 ZNF609O15014 1411 aa15.27■□□□□ 0.03
GABPB1-206ENST00000543881 PSME4Q14997 1843 aa15.27■□□□□ 0.03
GABPB1-206ENST00000543881 TBC1D8O95759 1140 aa15.27■□□□□ 0.03
GABPB1-206ENST00000543881 MOB2Q70IA6 237 aa15.27■□□□□ 0.03
GABPB1-206ENST00000543881 CCDC191Q8NCU4 936 aa15.27■□□□□ 0.03
GABPB1-206ENST00000543881 MYOZ2Q9NPC6 264 aa15.27■□□□□ 0.03
GABPB1-206ENST00000543881 ANP32CO43423 234 aa15.26■□□□□ 0.03
GABPB1-206ENST00000543881 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-206ENST00000543881 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
GABPB1-206ENST00000543881 ZNF296Q8WUU4 475 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-206ENST00000543881 GMLQ99445 158 aa15.26■□□□□ 0.03
GABPB1-206ENST00000543881 SCAF8Q9UPN6 1271 aaKnown RBP15.26■□□□□ 0.03
GABPB1-206ENST00000543881 MAP3K2Q9Y2U5 619 aa15.26■□□□□ 0.03
GABPB1-206ENST00000543881 PITPNM2Q9BZ72 1349 aa15.26■□□□□ 0.03
GABPB1-206ENST00000543881 PI4KAP2A4QPH2 592 aa15.25■□□□□ 0.03
GABPB1-206ENST00000543881 UBE2Q2LH0YL09 131 aa15.25■□□□□ 0.03
GABPB1-206ENST00000543881 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
GABPB1-206ENST00000543881 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
GABPB1-206ENST00000543881 TWISTNBQ3B726 338 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms