RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 EPB41L2O43491 1005 aaKnown RBP15.04■□□□□ -0
TUBGCP2-210ENST00000543663 TXLNAP40222 546 aa15.04■□□□□ -0
TUBGCP2-210ENST00000543663 SBNO1A3KN83 1393 aa15.04■□□□□ -0
TUBGCP2-210ENST00000543663 SOS1Q07889 1333 aaPredicted RBP15.03■□□□□ -0
TUBGCP2-210ENST00000543663 DDX19AQ9NUU7 478 aaKnown RBP15.03■□□□□ -0
TUBGCP2-210ENST00000543663 TECPR2O15040 1411 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 KIF24Q5T7B8 1368 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 ABCC4O15439 1325 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 GRM8O00222 908 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 CNNM3Q8NE01 707 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 ZNF496Q96IT1 587 aaPredicted RBP15.03■□□□□ -0
TUBGCP2-210ENST00000543663 CDK5RAP3Q96JB5 506 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 BICC1Q9H694 974 aaKnown RBP15.03■□□□□ -0
TUBGCP2-210ENST00000543663 TMEM63CQ9P1W3 806 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 ZNF213O14771 459 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 A1BGP04217 495 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 PALD1Q9ULE6 856 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 RXRAP19793 462 aa15.03■□□□□ -0
TUBGCP2-210ENST00000543663 RBM25P49756 843 aaKnown RBP15.02■□□□□ -0
TUBGCP2-210ENST00000543663 EIF5P55010 431 aaKnown RBP15.02■□□□□ -0
TUBGCP2-210ENST00000543663 CT47A1Q5JQC4 288 aaPredicted RBP15.02■□□□□ -0
TUBGCP2-210ENST00000543663 ACSBG1Q96GR2 724 aa15.02■□□□□ -0
TUBGCP2-210ENST00000543663 NAPBQ9H115 298 aa15.02■□□□□ -0
TUBGCP2-210ENST00000543663 ZNHIT6Q9NWK9 470 aaKnown RBP15.02■□□□□ -0
TUBGCP2-210ENST00000543663 HYPKQ9NX55 129 aa15.02■□□□□ -0
TUBGCP2-210ENST00000543663 NMIQ13287 307 aaPredicted RBP15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 CEP135Q66GS9 1140 aa15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 SIGLEC1Q9BZZ2 1709 aa15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 SMTNL1A8MU46 457 aa15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 KRT18P05783 430 aaKnown RBP15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 ZNF853P0CG23 659 aa15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 KSR2Q6VAB6 950 aa15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 C19orf44Q9H6X5 657 aa15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 TCEAL9Q9UHQ7 104 aa15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 ARHGEF10O15013 1369 aa15.02□□□□□ -0.01
TUBGCP2-210ENST00000543663 RANBP6O60518 1105 aaKnown RBP15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 Q6ZUG5 572 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 AOPEPQ8N6M6 819 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 DNAI1Q9UI46 699 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 RTL1A6NKG5 1358 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 IFIT3O14879 490 aaKnown RBP15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 TIMM10P62072 90 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 TYRO3Q06418 890 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 FAM200AQ8TCP9 573 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 EIF4A1P60842 406 aaKnown RBP15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 GNG11P61952 73 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 SNW1Q13573 536 aaKnown RBP15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 CCP110O43303 1012 aa15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 CWC15Q9P013 229 aaKnown RBP15.01□□□□□ -0.01
TUBGCP2-210ENST00000543663 KIAA0232Q92628 1395 aa15□□□□□ -0.01
TUBGCP2-210ENST00000543663 CBFA2T2O43439 604 aa15□□□□□ -0.01
TUBGCP2-210ENST00000543663 LIG1P18858 919 aa15□□□□□ -0.01
TUBGCP2-210ENST00000543663 USP5P45974 858 aa15□□□□□ -0.01
TUBGCP2-210ENST00000543663 HELBQ8NG08 1087 aaPredicted RBP15□□□□□ -0.01
TUBGCP2-210ENST00000543663 USP6P35125 1406 aa15□□□□□ -0.01
TUBGCP2-210ENST00000543663 CCDC181Q5TID7 509 aa15□□□□□ -0.01
TUBGCP2-210ENST00000543663 ZNF594Q96JF6 807 aaPredicted RBP15□□□□□ -0.01
TUBGCP2-210ENST00000543663 CCDC43Q96MW1 224 aaKnown RBP15□□□□□ -0.01
TUBGCP2-210ENST00000543663 KLF18A0A0U1RQI7 1052 aa15□□□□□ -0.01
TUBGCP2-210ENST00000543663 CCDC129Q6ZRS4 1044 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 TRMT1LQ7Z2T5 733 aaKnown RBP14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 BABAM1Q9NWV8 329 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 SNRPA1P09661 255 aaKnown RBP14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 LDHAL6AQ6ZMR3 332 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 FAM227BQ96M60 508 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 CDKL5O76039 1030 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 MCM5P33992 734 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 ZNF790Q6PG37 636 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 KIAA1328Q86T90 577 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 LMBRD1Q9NUN5 540 aa14.99□□□□□ -0.01
TUBGCP2-210ENST00000543663 APOBRQ0VD83 1088 aa14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 IFIT5Q13325 482 aaKnown RBP14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 OTUD7BQ6GQQ9 843 aa14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 CADPS2Q86UW7 1296 aa14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 SUCLG2Q96I99 432 aa14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 CDC42BPGQ6DT37 1551 aa14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 STX1AQ16623 288 aa14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 SLC26A6Q9BXS9 759 aa14.98□□□□□ -0.01
TUBGCP2-210ENST00000543663 GOLGA8AA7E2F4 631 aa14.97□□□□□ -0.01
TUBGCP2-210ENST00000543663 AFMP43652 599 aa14.97□□□□□ -0.01
TUBGCP2-210ENST00000543663 MATR3P43243 847 aaKnown RBP eCLIP14.97□□□□□ -0.01
TUBGCP2-210ENST00000543663 PRM3Q9NNZ6 103 aa14.97□□□□□ -0.01
TUBGCP2-210ENST00000543663 LINS1Q8NG48 757 aa14.97□□□□□ -0.01
TUBGCP2-210ENST00000543663 TRMT112Q9UI30 125 aaKnown RBP14.97□□□□□ -0.01
TUBGCP2-210ENST00000543663 SLC12A7Q9Y666 1083 aa14.97□□□□□ -0.01
TUBGCP2-210ENST00000543663 MCM6Q14566 821 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 CREB3L3Q68CJ9 461 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 ZCRB1Q8TBF4 217 aaKnown RBP14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 FAM89AQ96GI7 184 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 NCOA5Q9HCD5 579 aaKnown RBP14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 A0A1B0GVL5 298 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 TFCP2Q12800 502 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 ERLIN1O75477 346 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 IARSP41252 1262 aaKnown RBP14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 PRIMPOLQ96LW4 560 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 DACH1Q9UI36 760 aa14.96□□□□□ -0.01
TUBGCP2-210ENST00000543663 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms