RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 ADAMTS8Q9UP79 889 aa20.01■□□□□ 0.79
RTN3-211ENST00000542238 FAM161AQ3B820 660 aa20■□□□□ 0.79
RTN3-211ENST00000542238 RBM26Q5T8P6 1007 aaKnown RBP20■□□□□ 0.79
RTN3-211ENST00000542238 TBC1D16Q8TBP0 767 aa20■□□□□ 0.79
RTN3-211ENST00000542238 C2orf69Q8N8R5 385 aa19.99■□□□□ 0.79
RTN3-211ENST00000542238 ZBTB38Q8NAP3 1195 aaPredicted RBP19.99■□□□□ 0.79
RTN3-211ENST00000542238 MBIPQ9NS73 344 aa19.99■□□□□ 0.79
RTN3-211ENST00000542238 RGMBQ6NW40 437 aa19.98■□□□□ 0.79
RTN3-211ENST00000542238 GBA2Q9HCG7 927 aaPredicted RBP19.98■□□□□ 0.79
RTN3-211ENST00000542238 KCNQ5Q9NR82 932 aa19.98■□□□□ 0.79
RTN3-211ENST00000542238 ANKIB1Q9P2G1 1089 aa19.98■□□□□ 0.79
RTN3-211ENST00000542238 COL4A1P02462 1669 aa19.97■□□□□ 0.79
RTN3-211ENST00000542238 RTL9Q8NET4 1388 aa19.97■□□□□ 0.79
RTN3-211ENST00000542238 EGFRP00533 1210 aa19.97■□□□□ 0.79
RTN3-211ENST00000542238 MLLT1Q03111 559 aaPredicted RBP19.97■□□□□ 0.79
RTN3-211ENST00000542238 CALD1Q05682 793 aaKnown RBP19.97■□□□□ 0.79
RTN3-211ENST00000542238 DLK2Q6UY11 383 aa19.97■□□□□ 0.79
RTN3-211ENST00000542238 CCDC102AQ96A19 550 aa19.97■□□□□ 0.79
RTN3-211ENST00000542238 MCOLN1Q9GZU1 580 aa19.97■□□□□ 0.79
RTN3-211ENST00000542238 PODXL2Q9NZ53 605 aa19.97■□□□□ 0.79
RTN3-211ENST00000542238 SCN9AQ15858 1988 aa19.96■□□□□ 0.79
RTN3-211ENST00000542238 UFL1O94874 794 aa19.96■□□□□ 0.79
RTN3-211ENST00000542238 VIL1P09327 827 aaKnown RBP19.96■□□□□ 0.79
RTN3-211ENST00000542238 KIF4BQ2VIQ3 1234 aa19.96■□□□□ 0.79
RTN3-211ENST00000542238 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
RTN3-211ENST00000542238 SULF1Q8IWU6 871 aa19.96■□□□□ 0.79
RTN3-211ENST00000542238 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
RTN3-211ENST00000542238 SEC31BQ9NQW1 1179 aa19.96■□□□□ 0.79
RTN3-211ENST00000542238 GGA1Q9UJY5 639 aa19.96■□□□□ 0.79
RTN3-211ENST00000542238 ADM5C9JUS6 153 aa19.95■□□□□ 0.78
RTN3-211ENST00000542238 GNAI1P63096 354 aa19.95■□□□□ 0.78
RTN3-211ENST00000542238 DGKZQ13574 1117 aa19.95■□□□□ 0.78
RTN3-211ENST00000542238 CCDC191Q8NCU4 936 aa19.95■□□□□ 0.78
RTN3-211ENST00000542238 ZIC5Q96T25 663 aa19.95■□□□□ 0.78
RTN3-211ENST00000542238 MYD88Q99836 296 aa19.95■□□□□ 0.78
RTN3-211ENST00000542238 CHMP4AQ9BY43 222 aa19.95■□□□□ 0.78
RTN3-211ENST00000542238 IFT57Q9NWB7 429 aa19.95■□□□□ 0.78
RTN3-211ENST00000542238 PCCAP05165 728 aaPredicted RBP19.94■□□□□ 0.78
RTN3-211ENST00000542238 ZNF853P0CG23 659 aa19.94■□□□□ 0.78
RTN3-211ENST00000542238 RGS19P49795 217 aa19.94■□□□□ 0.78
RTN3-211ENST00000542238 ZNF157P51786 506 aaPredicted RBP19.94■□□□□ 0.78
RTN3-211ENST00000542238 AKAP11Q9UKA4 1901 aa19.94■□□□□ 0.78
RTN3-211ENST00000542238 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
RTN3-211ENST00000542238 PDE8AO60658 829 aa19.93■□□□□ 0.78
RTN3-211ENST00000542238 DDX58O95786 925 aaKnown RBP19.93■□□□□ 0.78
RTN3-211ENST00000542238 CWC25Q9NXE8 425 aaPredicted RBP19.93■□□□□ 0.78
RTN3-211ENST00000542238 GGA3Q9NZ52 723 aa19.93■□□□□ 0.78
RTN3-211ENST00000542238 FAM155AB1AL88 458 aaPredicted RBP19.92■□□□□ 0.78
RTN3-211ENST00000542238 AGBL3Q8NEM8 1001 aa19.92■□□□□ 0.78
RTN3-211ENST00000542238 PSME4Q14997 1843 aa19.92■□□□□ 0.78
RTN3-211ENST00000542238 APAF1O14727 1248 aa19.91■□□□□ 0.78
RTN3-211ENST00000542238 KIF23Q02241 960 aaPredicted RBP19.91■□□□□ 0.78
RTN3-211ENST00000542238 ANKRD18AQ8IVF6 992 aa19.91■□□□□ 0.78
RTN3-211ENST00000542238 CCDC85AQ96PX6 553 aaPredicted RBP19.91■□□□□ 0.78
RTN3-211ENST00000542238 SAGE1Q9NXZ1 904 aa19.91■□□□□ 0.78
RTN3-211ENST00000542238 XDHP47989 1333 aa19.91■□□□□ 0.78
RTN3-211ENST00000542238 CCDC30Q5VVM6 783 aa19.9■□□□□ 0.78
RTN3-211ENST00000542238 RSBN1LQ6PCB5 846 aaPredicted RBP19.9■□□□□ 0.78
RTN3-211ENST00000542238 CDCA5Q96FF9 252 aa19.9■□□□□ 0.78
RTN3-211ENST00000542238 METTL22Q9BUU2 404 aaPredicted RBP19.9■□□□□ 0.78
RTN3-211ENST00000542238 ZNF609O15014 1411 aa19.89■□□□□ 0.77
RTN3-211ENST00000542238 ZNF280AP59817 542 aaPredicted RBP19.89■□□□□ 0.77
RTN3-211ENST00000542238 SCARF1Q14162 830 aa19.89■□□□□ 0.77
RTN3-211ENST00000542238 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
RTN3-211ENST00000542238 USP17L8P0C7I0 530 aa19.88■□□□□ 0.77
RTN3-211ENST00000542238 ATP2B4P23634 1241 aa19.88■□□□□ 0.77
RTN3-211ENST00000542238 ANGEL2Q5VTE6 544 aaKnown RBP19.88■□□□□ 0.77
RTN3-211ENST00000542238 CDC5LQ99459 802 aaKnown RBP19.88■□□□□ 0.77
RTN3-211ENST00000542238 MYH3P11055 1940 aa19.88■□□□□ 0.77
RTN3-211ENST00000542238 ASTN2O75129 1339 aaPredicted RBP19.87■□□□□ 0.77
RTN3-211ENST00000542238 TRPA1O75762 1119 aa19.87■□□□□ 0.77
RTN3-211ENST00000542238 SLC10A3P09131 477 aa19.87■□□□□ 0.77
RTN3-211ENST00000542238 PODNQ7Z5L7 613 aa19.87■□□□□ 0.77
RTN3-211ENST00000542238 REM2Q8IYK8 340 aaPredicted RBP19.87■□□□□ 0.77
RTN3-211ENST00000542238 C8orf58Q8NAV2 365 aa19.87■□□□□ 0.77
RTN3-211ENST00000542238 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
RTN3-211ENST00000542238 MYOZ2Q9NPC6 264 aa19.87■□□□□ 0.77
RTN3-211ENST00000542238 RNF186Q9NXI6 227 aa19.87■□□□□ 0.77
RTN3-211ENST00000542238 USP17L3A6NCW0 530 aa19.86■□□□□ 0.77
RTN3-211ENST00000542238 USP17L4A6NCW7 530 aa19.86■□□□□ 0.77
RTN3-211ENST00000542238 FKBP1BP68106 108 aa19.86■□□□□ 0.77
RTN3-211ENST00000542238 USP17L1Q7RTZ2 530 aa19.86■□□□□ 0.77
RTN3-211ENST00000542238 MAP3K2Q9Y2U5 619 aa19.86■□□□□ 0.77
RTN3-211ENST00000542238 PITPNM2Q9BZ72 1349 aa19.85■□□□□ 0.77
RTN3-211ENST00000542238 CTSWP56202 376 aa19.85■□□□□ 0.77
RTN3-211ENST00000542238 NEXNQ0ZGT2 675 aa19.85■□□□□ 0.77
RTN3-211ENST00000542238 SPEF2Q9C093 1822 aa19.85■□□□□ 0.77
RTN3-211ENST00000542238 KSR2Q6VAB6 950 aa19.84■□□□□ 0.77
RTN3-211ENST00000542238 CSRNP1Q96S65 589 aa19.84■□□□□ 0.77
RTN3-211ENST00000542238 GMLQ99445 158 aa19.84■□□□□ 0.77
RTN3-211ENST00000542238 PAPPA2Q9BXP8 1791 aa19.83■□□□□ 0.77
RTN3-211ENST00000542238 STK31Q9BXU1 1019 aa19.83■□□□□ 0.77
RTN3-211ENST00000542238 BSDC1Q9NW68 430 aaPredicted RBP19.83■□□□□ 0.77
RTN3-211ENST00000542238 MED23Q9ULK4 1368 aa19.83■□□□□ 0.76
RTN3-211ENST00000542238 PI4KAP2A4QPH2 592 aa19.82■□□□□ 0.76
RTN3-211ENST00000542238 RASAL3Q86YV0 1011 aa19.82■□□□□ 0.76
RTN3-211ENST00000542238 OGFOD1Q8N543 542 aa19.82■□□□□ 0.76
RTN3-211ENST00000542238 PI4KAP1Q8N8J0 262 aa19.82■□□□□ 0.76
RTN3-211ENST00000542238 TTLL11Q8NHH1 800 aa19.82■□□□□ 0.76
RTN3-211ENST00000542238 MINPP1Q9UNW1 487 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms