RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SUCLG2Q96I99 432 aa21.05■□□□□ 0.96
UBC-208ENST00000540700 COG6Q9Y2V7 657 aa21.05■□□□□ 0.96
UBC-208ENST00000540700 GJA3Q9Y6H8 435 aa21.05■□□□□ 0.96
UBC-208ENST00000540700 COL4A1P02462 1669 aa21.05■□□□□ 0.96
UBC-208ENST00000540700 KLRG2A4D1S0 409 aaPredicted RBP21.04■□□□□ 0.96
UBC-208ENST00000540700 FZD9O00144 591 aa21.04■□□□□ 0.96
UBC-208ENST00000540700 GTF2E1P29083 439 aaPredicted RBP21.04■□□□□ 0.96
UBC-208ENST00000540700 GPC2Q8N158 579 aa21.04■□□□□ 0.96
UBC-208ENST00000540700 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
UBC-208ENST00000540700 FMR1Q06787 632 aaKnown RBP eCLIP21.03■□□□□ 0.961e-25■■□□□ 11.5
UBC-208ENST00000540700 PDE3AQ14432 1141 aa21.03■□□□□ 0.96
UBC-208ENST00000540700 ITPRIPQ8IWB1 547 aa21.03■□□□□ 0.96
UBC-208ENST00000540700 JDP2Q8WYK2 163 aa21.03■□□□□ 0.96
UBC-208ENST00000540700 C9orf78Q9NZ63 289 aaPredicted RBP21.03■□□□□ 0.96
UBC-208ENST00000540700 CCDC85CA6NKD9 419 aa21.02■□□□□ 0.96
UBC-208ENST00000540700 MVPQ14764 893 aaKnown RBP21.02■□□□□ 0.96
UBC-208ENST00000540700 PLA2G12BQ9BX93 195 aa21.02■□□□□ 0.96
UBC-208ENST00000540700 ZBTB7BO15156 539 aaPredicted RBP21.01■□□□□ 0.95
UBC-208ENST00000540700 ALDH1B1P30837 517 aa21.01■□□□□ 0.95
UBC-208ENST00000540700 FOXO4P98177 505 aa21.01■□□□□ 0.95
UBC-208ENST00000540700 CRY2Q49AN0 593 aa21.01■□□□□ 0.95
UBC-208ENST00000540700 ADAMTSL1Q8N6G6 1762 aa21■□□□□ 0.95
UBC-208ENST00000540700 LMOD1P29536 600 aaPredicted RBP21■□□□□ 0.95
UBC-208ENST00000540700 EIF6P56537 245 aaKnown RBP21■□□□□ 0.95
UBC-208ENST00000540700 SLC51AQ86UW1 340 aa21■□□□□ 0.95
UBC-208ENST00000540700 CAPNS2Q96L46 248 aa21■□□□□ 0.95
UBC-208ENST00000540700 BEGAINQ9BUH8 593 aa21■□□□□ 0.95
UBC-208ENST00000540700 PDE8AO60658 829 aa20.99■□□□□ 0.95
UBC-208ENST00000540700 CTSWP56202 376 aa20.99■□□□□ 0.95
UBC-208ENST00000540700 CYP4F22Q6NT55 531 aa20.99■□□□□ 0.95
UBC-208ENST00000540700 ANKRD44Q8N8A2 993 aa20.99■□□□□ 0.95
UBC-208ENST00000540700 CCDC85AQ96PX6 553 aaPredicted RBP20.99■□□□□ 0.95
UBC-208ENST00000540700 MS4A1P11836 297 aa20.98■□□□□ 0.95
UBC-208ENST00000540700 EPS15P42566 896 aa20.98■□□□□ 0.95
UBC-208ENST00000540700 SF3B3Q15393 1217 aaKnown RBP20.98■□□□□ 0.95
UBC-208ENST00000540700 TTLL11Q8NHH1 800 aa20.98■□□□□ 0.95
UBC-208ENST00000540700 NLRP3Q96P20 1036 aa20.98■□□□□ 0.95
UBC-208ENST00000540700 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
UBC-208ENST00000540700 BICC1Q9H694 974 aaKnown RBP20.98■□□□□ 0.95
UBC-208ENST00000540700 TSKSQ9UJT2 592 aa20.98■□□□□ 0.95
UBC-208ENST00000540700 TRAF5O00463 557 aa20.97■□□□□ 0.95
UBC-208ENST00000540700 GPR101Q96P66 508 aaPredicted RBP20.97■□□□□ 0.95
UBC-208ENST00000540700 PSMD1Q99460 953 aa20.97■□□□□ 0.95
UBC-208ENST00000540700 C1orf115Q9H7X2 142 aa20.97■□□□□ 0.95
UBC-208ENST00000540700 LRRFIP2Q9Y608 721 aaKnown RBP20.97■□□□□ 0.95
UBC-208ENST00000540700 CSF1RP07333 972 aa20.96■□□□□ 0.95
UBC-208ENST00000540700 UBTFL1P0CB47 393 aaPredicted RBP20.96■□□□□ 0.95
UBC-208ENST00000540700 ECE1P42892 770 aa20.96■□□□□ 0.95
UBC-208ENST00000540700 IRX6P78412 446 aaPredicted RBP20.96■□□□□ 0.95
UBC-208ENST00000540700 MLLT1Q03111 559 aaPredicted RBP20.96■□□□□ 0.95
UBC-208ENST00000540700 LARGE2Q8N3Y3 721 aa20.96■□□□□ 0.95
UBC-208ENST00000540700 GREM2Q9H772 168 aa20.96■□□□□ 0.95
UBC-208ENST00000540700 SEC31BQ9NQW1 1179 aa20.96■□□□□ 0.95
UBC-208ENST00000540700 SCNN1DP51172 638 aa20.95■□□□□ 0.94
UBC-208ENST00000540700 RABL6Q3YEC7 729 aaPredicted RBP20.95■□□□□ 0.94
UBC-208ENST00000540700 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
UBC-208ENST00000540700 GNAI3P08754 354 aa20.94■□□□□ 0.94
UBC-208ENST00000540700 HOXA10P31260 410 aaPredicted RBP20.94■□□□□ 0.94
UBC-208ENST00000540700 LMBR1LQ6UX01 489 aa20.94■□□□□ 0.94
UBC-208ENST00000540700 ZBTB40Q9NUA8 1239 aa20.94■□□□□ 0.94
UBC-208ENST00000540700 DDX19BQ9UMR2 479 aa20.94■□□□□ 0.94
UBC-208ENST00000540700 COL4A5P29400 1685 aa20.93■□□□□ 0.94
UBC-208ENST00000540700 TAF1P21675 1872 aa20.93■□□□□ 0.94
UBC-208ENST00000540700 AOC2O75106 756 aa20.93■□□□□ 0.94
UBC-208ENST00000540700 CST9Q5W186 159 aa20.93■□□□□ 0.94
UBC-208ENST00000540700 RPGRQ92834 1020 aaKnown RBP20.93■□□□□ 0.94
UBC-208ENST00000540700 MYH3P11055 1940 aa20.92■□□□□ 0.94
UBC-208ENST00000540700 CC2D2BQ6DHV5 1058 aa20.92■□□□□ 0.94
UBC-208ENST00000540700 CELF1Q92879 486 aaKnown RBP20.92■□□□□ 0.94
UBC-208ENST00000540700 RTL9Q8NET4 1388 aa20.92■□□□□ 0.94
UBC-208ENST00000540700 SNED1Q8TER0 1413 aa20.92■□□□□ 0.94
UBC-208ENST00000540700 GNAI2P04899 355 aa20.91■□□□□ 0.94
UBC-208ENST00000540700 CCDC152Q4G0S7 254 aa20.91■□□□□ 0.94
UBC-208ENST00000540700 TLL2Q9Y6L7 1015 aa20.91■□□□□ 0.94
UBC-208ENST00000540700 LTBP1Q14766 1721 aa20.9■□□□□ 0.94
UBC-208ENST00000540700 USP50Q70EL3 339 aaPredicted RBP20.9■□□□□ 0.94
UBC-208ENST00000540700 NIM1KQ8IY84 436 aa20.9■□□□□ 0.94
UBC-208ENST00000540700 EXOC6Q8TAG9 804 aa20.9■□□□□ 0.94
UBC-208ENST00000540700 HSP90B1P14625 803 aaKnown RBP20.89■□□□□ 0.93
UBC-208ENST00000540700 ITGA6P23229 1130 aa20.89■□□□□ 0.93
UBC-208ENST00000540700 RFX5P48382 616 aaPredicted RBP20.89■□□□□ 0.93
UBC-208ENST00000540700 GRAPQ13588 217 aa20.89■□□□□ 0.93
UBC-208ENST00000540700 GRAPLQ8TC17 118 aaPredicted RBP20.89■□□□□ 0.93
UBC-208ENST00000540700 RBM17Q96I25 401 aaKnown RBP20.89■□□□□ 0.93
UBC-208ENST00000540700 CRAMP1Q96RY5 1269 aa20.89■□□□□ 0.93
UBC-208ENST00000540700 PNMA6EA0A0J9YXQ4 647 aa20.88■□□□□ 0.93
UBC-208ENST00000540700 PPEF1O14829 653 aaPredicted RBP20.88■□□□□ 0.93
UBC-208ENST00000540700 DDX46Q7L014 1031 aaKnown RBP20.88■□□□□ 0.93
UBC-208ENST00000540700 ZNF594Q96JF6 807 aaPredicted RBP20.88■□□□□ 0.93
UBC-208ENST00000540700 CHMP3Q9Y3E7 222 aa20.88■□□□□ 0.93
UBC-208ENST00000540700 PPIP5K2O43314 1243 aa20.87■□□□□ 0.93
UBC-208ENST00000540700 CELF2O95319 508 aaKnown RBP20.87■□□□□ 0.93
UBC-208ENST00000540700 RGS19P49795 217 aa20.87■□□□□ 0.93
UBC-208ENST00000540700 MTX1Q13505 466 aa20.87■□□□□ 0.93
UBC-208ENST00000540700 CEP85Q6P2H3 762 aa20.87■□□□□ 0.93
UBC-208ENST00000540700 KLHDC4Q8TBB5 520 aa20.87■□□□□ 0.93
UBC-208ENST00000540700 MAP2K2P36507 400 aa20.86■□□□□ 0.93
UBC-208ENST00000540700 AOC3Q16853 763 aa20.86■□□□□ 0.93
UBC-208ENST00000540700 SIRT2Q8IXJ6 389 aa20.86■□□□□ 0.93
UBC-208ENST00000540700 MCOLN1Q9GZU1 580 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms