RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	JDP2	Q8WYK2	163 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	NOB1	Q9ULX3	412 aa	Known RBP	13.74	□□□□□ -0.21
LDHA-215	ENST00000537296		A0A1B0GUL6	1792 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	RTL9	Q8NET4	1388 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	ALDH1L1	O75891	902 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	TOMM70	O94826	608 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	VEGFA	P15692	232 aa	Predicted RBP	13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	ITGA6	P23229	1130 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	KIAA2012	Q0VF49	1180 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	KAZALD1	Q96I82	304 aa		13.74	□□□□□ -0.21
LDHA-215	ENST00000537296	SCN4A	P35499	1836 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	RIMBP2	O15034	1052 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	CT47B1	P0C2W7	299 aa	Predicted RBP	13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	POTEI	P0CG38	1075 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	POTEJ	P0CG39	1038 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	NIM1K	Q8IY84	436 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	SUPT20H	Q8NEM7	779 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	TBC1D16	Q8TBP0	767 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	SUCLG2	Q96I99	432 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	SCN9A	Q15858	1988 aa		13.73	□□□□□ -0.21
LDHA-215	ENST00000537296	YDJC	A8MPS7	323 aa		13.72	□□□□□ -0.21
LDHA-215	ENST00000537296	C6orf229	H3BNL8	230 aa		13.72	□□□□□ -0.21
LDHA-215	ENST00000537296	BCAR3	O75815	825 aa		13.72	□□□□□ -0.21
LDHA-215	ENST00000537296	LMBR1L	Q6UX01	489 aa		13.72	□□□□□ -0.21
LDHA-215	ENST00000537296	CDC5L	Q99459	802 aa	Known RBP	13.72	□□□□□ -0.21
LDHA-215	ENST00000537296	TNN	Q9UQP3	1299 aa		13.72	□□□□□ -0.21
LDHA-215	ENST00000537296	GJA3	Q9Y6H8	435 aa		13.72	□□□□□ -0.21
LDHA-215	ENST00000537296	ZBED9	Q6R2W3	1325 aa		13.72	□□□□□ -0.21
LDHA-215	ENST00000537296	VASP	P50552	380 aa	Predicted RBP	13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	WASHC4	Q2M389	1173 aa		13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	DBNDD1	Q9H9R9	158 aa		13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	PODXL2	Q9NZ53	605 aa		13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	ANKIB1	Q9P2G1	1089 aa		13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	MINPP1	Q9UNW1	487 aa		13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	UTY	O14607	1347 aa		13.71	□□□□□ -0.21
LDHA-215	ENST00000537296	UFL1	O94874	794 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	BRPF1	P55201	1214 aa	Predicted RBP	13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	EIF6	P56537	245 aa	Known RBP	13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	CXCL9	Q07325	125 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	DOK7	Q18PE1	504 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	GPC2	Q8N158	579 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	RBM46	Q8TBY0	533 aa	Known RBP	13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	ZNF594	Q96JF6	807 aa	Predicted RBP	13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	USP44	Q9H0E7	712 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	VPS33B	Q9H267	617 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	KCNQ5	Q9NR82	932 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	BSDC1	Q9NW68	430 aa	Predicted RBP	13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	ZNRF3	Q9ULT6	936 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	CHMP3	Q9Y3E7	222 aa		13.7	□□□□□ -0.22
LDHA-215	ENST00000537296	RAD17	O75943	681 aa		13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	ADAMTSL1	Q8N6G6	1762 aa		13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	ANKRD18B	A2A2Z9	1011 aa		13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	IGHMBP2	P38935	993 aa	Known RBP	13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	SCNN1D	P51172	638 aa		13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	ANKRD44	Q8N8A2	993 aa		13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	BICC1	Q9H694	974 aa	Known RBP	13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	GGA1	Q9UJY5	639 aa		13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	CLEC11A	Q9Y240	323 aa		13.69	□□□□□ -0.22
LDHA-215	ENST00000537296	XDH	P47989	1333 aa		13.68	□□□□□ -0.22
LDHA-215	ENST00000537296	SNAP23	O00161	211 aa		13.68	□□□□□ -0.22
LDHA-215	ENST00000537296	KLRK1	P26718	216 aa		13.68	□□□□□ -0.22
LDHA-215	ENST00000537296	EPS15	P42566	896 aa		13.68	□□□□□ -0.22
LDHA-215	ENST00000537296	IFIT5	Q13325	482 aa	Known RBP	13.68	□□□□□ -0.22
LDHA-215	ENST00000537296	ZNF646	O15015	1829 aa	Predicted RBP	13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	PSME4	Q14997	1843 aa		13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	SHTN1	A0MZ66	631 aa		13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	ECE2	O60344	883 aa		13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	TXNRD3	Q86VQ6	643 aa		13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	HELB	Q8NG08	1087 aa	Predicted RBP	13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	FRAT1	Q92837	279 aa	Predicted RBP	13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	MPHOSPH8	Q99549	860 aa		13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	HACL1	Q9UJ83	578 aa		13.67	□□□□□ -0.22
LDHA-215	ENST00000537296	IQCA1L	A6NCM1	817 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	TAF5L	O75529	589 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	TRIM27	P14373	513 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	HSPA6	P17066	643 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	ATP2B4	P23634	1241 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	EPHX2	P34913	555 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	GMPS	P49915	693 aa	Predicted RBP	13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	CCT4	P50991	539 aa	Known RBP	13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	CHRND	Q07001	517 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	EAPP	Q56P03	285 aa	Predicted RBP	13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	CIAPIN1	Q6FI81	312 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	EYA3	Q99504	573 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	API5	Q9BZZ5	524 aa	Known RBP	13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	KIF16B	Q96L93	1317 aa		13.66	□□□□□ -0.22
LDHA-215	ENST00000537296	PSMD14	O00487	310 aa		13.65	□□□□□ -0.22
LDHA-215	ENST00000537296	HTRA3	P83110	453 aa		13.65	□□□□□ -0.22
LDHA-215	ENST00000537296	CCDC57	Q2TAC2	916 aa		13.65	□□□□□ -0.22
LDHA-215	ENST00000537296	RABL6	Q3YEC7	729 aa	Predicted RBP	13.65	□□□□□ -0.22
LDHA-215	ENST00000537296	SMC1B	Q8NDV3	1235 aa		13.65	□□□□□ -0.22
LDHA-215	ENST00000537296	PUS3	Q9BZE2	481 aa	Known RBP	13.65	□□□□□ -0.22
LDHA-215	ENST00000537296	FSTL1	Q12841	308 aa		13.64	□□□□□ -0.23
LDHA-215	ENST00000537296	KLHDC4	Q8TBB5	520 aa		13.64	□□□□□ -0.23
LDHA-215	ENST00000537296	ARHGAP45	Q92619	1136 aa		13.64	□□□□□ -0.23

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