RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 KLHDC4Q8TBB5 520 aa22.46■■□□□ 1.19
DDX55-204ENST00000536079 PUS3Q9BZE2 481 aaKnown RBP22.46■■□□□ 1.19
DDX55-204ENST00000536079 PODXL2Q9NZ53 605 aa22.46■■□□□ 1.19
DDX55-204ENST00000536079 RFX5P48382 616 aaPredicted RBP22.45■■□□□ 1.18
DDX55-204ENST00000536079 C6orf229H3BNL8 230 aa22.44■■□□□ 1.18
DDX55-204ENST00000536079 SNAP23O00161 211 aa22.44■■□□□ 1.18
DDX55-204ENST00000536079 ZBTB7BO15156 539 aaPredicted RBP22.44■■□□□ 1.18
DDX55-204ENST00000536079 PPIP5K2O43314 1243 aa22.44■■□□□ 1.18
DDX55-204ENST00000536079 ITPRIPQ8IWB1 547 aa22.44■■□□□ 1.18
DDX55-204ENST00000536079 MPHOSPH8Q99549 860 aa22.44■■□□□ 1.18
DDX55-204ENST00000536079 ANKIB1Q9P2G1 1089 aa22.44■■□□□ 1.18
DDX55-204ENST00000536079 TIAM2Q8IVF5 1701 aa22.43■■□□□ 1.18
DDX55-204ENST00000536079 ZNF541Q9H0D2 1346 aa22.43■■□□□ 1.18
DDX55-204ENST00000536079 RIMBP2O15034 1052 aa22.43■■□□□ 1.18
DDX55-204ENST00000536079 UFL1O94874 794 aa22.43■■□□□ 1.18
DDX55-204ENST00000536079 GNAI3P08754 354 aa22.43■■□□□ 1.18
DDX55-204ENST00000536079 CHRNDQ07001 517 aa22.43■■□□□ 1.18
DDX55-204ENST00000536079 LARGE2Q8N3Y3 721 aa22.43■■□□□ 1.18
DDX55-204ENST00000536079 HELBQ8NG08 1087 aaPredicted RBP22.43■■□□□ 1.18
DDX55-204ENST00000536079 DICER1Q9UPY3 1922 aaKnown RBP22.42■■□□□ 1.18
DDX55-204ENST00000536079 KIAA2012Q0VF49 1180 aa22.42■■□□□ 1.18
DDX55-204ENST00000536079 LRRC24Q50LG9 513 aa22.42■■□□□ 1.18
DDX55-204ENST00000536079 SUPT20HQ8NEM7 779 aa22.42■■□□□ 1.18
DDX55-204ENST00000536079 GGA1Q9UJY5 639 aa22.42■■□□□ 1.18
DDX55-204ENST00000536079 XDHP47989 1333 aa22.41■■□□□ 1.18
DDX55-204ENST00000536079 FZD9O00144 591 aa22.41■■□□□ 1.18
DDX55-204ENST00000536079 TAF5LO75529 589 aa22.41■■□□□ 1.18
DDX55-204ENST00000536079 TAF7LQ5H9L4 462 aa22.41■■□□□ 1.18
DDX55-204ENST00000536079 LDHAL6AQ6ZMR3 332 aa22.41■■□□□ 1.18
DDX55-204ENST00000536079 C1orf115Q9H7X2 142 aa22.41■■□□□ 1.18
DDX55-204ENST00000536079 KLRK1P26718 216 aa22.4■■□□□ 1.18
DDX55-204ENST00000536079 PTPN12Q05209 780 aaKnown RBP22.4■■□□□ 1.18
DDX55-204ENST00000536079 WASHC4Q2M389 1173 aa22.4■■□□□ 1.18
DDX55-204ENST00000536079 COG6Q9Y2V7 657 aa22.4■■□□□ 1.18
DDX55-204ENST00000536079 RIPOR2Q9Y4F9 1068 aa22.4■■□□□ 1.18
DDX55-204ENST00000536079 ZC3H4Q9UPT8 1303 aaKnown RBP22.39■■□□□ 1.18
DDX55-204ENST00000536079 GLTPD2A6NH11 291 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 YDJCA8MPS7 323 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 DDNO94850 711 aaPredicted RBP22.39■■□□□ 1.17
DDX55-204ENST00000536079 GNAI2P04899 355 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 ATP2B4P23634 1241 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 DOK7Q18PE1 504 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 TXNRD3Q86VQ6 643 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 VPS33BQ9H267 617 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 NMRK2Q9NPI5 230 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 CNNM1Q9NRU3 951 aa22.39■■□□□ 1.17
DDX55-204ENST00000536079 NIM1KQ8IY84 436 aa22.38■■□□□ 1.17
DDX55-204ENST00000536079 JDP2Q8WYK2 163 aa22.38■■□□□ 1.17
DDX55-204ENST00000536079 DBNDD1Q9H9R9 158 aa22.38■■□□□ 1.17
DDX55-204ENST00000536079 PA2G4Q9UQ80 394 aaKnown RBP22.38■■□□□ 1.17
DDX55-204ENST00000536079 MVPQ14764 893 aaKnown RBP22.37■■□□□ 1.17
DDX55-204ENST00000536079 KCNQ5Q9NR82 932 aa22.37■■□□□ 1.17
DDX55-204ENST00000536079 IRS2Q9Y4H2 1338 aa22.36■■□□□ 1.17
DDX55-204ENST00000536079 PNMA6EA0A0J9YXQ4 647 aa22.36■■□□□ 1.17
DDX55-204ENST00000536079 POTECB2RU33 542 aa22.36■■□□□ 1.17
DDX55-204ENST00000536079 EYA3Q99504 573 aa22.36■■□□□ 1.17
DDX55-204ENST00000536079 ANKRD2Q9GZV1 360 aa22.36■■□□□ 1.17
DDX55-204ENST00000536079 GPBP1L1Q9HC44 474 aaPredicted RBP22.36■■□□□ 1.17
DDX55-204ENST00000536079 ZNF804BA4D1E1 1349 aa22.35■■□□□ 1.17
DDX55-204ENST00000536079 MTX1Q13505 466 aa22.35■■□□□ 1.17
DDX55-204ENST00000536079 ATG9AQ7Z3C6 839 aa22.35■■□□□ 1.17
DDX55-204ENST00000536079 RRAGCQ9HB90 399 aa22.35■■□□□ 1.17
DDX55-204ENST00000536079 ZNRF3Q9ULT6 936 aa22.35■■□□□ 1.17
DDX55-204ENST00000536079 SRGAP3O43295 1099 aa22.34■■□□□ 1.17
DDX55-204ENST00000536079 MS4A1P11836 297 aa22.34■■□□□ 1.17
DDX55-204ENST00000536079 RRP1P56182 461 aaKnown RBP22.34■■□□□ 1.17
DDX55-204ENST00000536079 CXCL9Q07325 125 aa22.34■■□□□ 1.17
DDX55-204ENST00000536079 PDE3AQ14432 1141 aa22.34■■□□□ 1.17
DDX55-204ENST00000536079 ZC3H12CQ9C0D7 883 aaKnown RBP22.34■■□□□ 1.17
DDX55-204ENST00000536079 SIL1Q9H173 461 aa22.34■■□□□ 1.17
DDX55-204ENST00000536079 HDAC5Q9UQL6 1122 aa22.34■■□□□ 1.17
DDX55-204ENST00000536079 LEMD3Q9Y2U8 911 aa22.34■■□□□ 1.17
DDX55-204ENST00000536079 A0A1B0GUL6 1792 aa22.34■■□□□ 1.17
DDX55-204ENST00000536079 EYA2O00167 538 aa22.33■■□□□ 1.17
DDX55-204ENST00000536079 KIF3CO14782 793 aa22.33■■□□□ 1.17
DDX55-204ENST00000536079 ECE2O60344 883 aa22.33■■□□□ 1.17
DDX55-204ENST00000536079 RAD17O75943 681 aa22.33■■□□□ 1.17
DDX55-204ENST00000536079 VGLL2Q8N8G2 317 aa22.33■■□□□ 1.17
DDX55-204ENST00000536079 EIF6P56537 245 aaKnown RBP22.32■■□□□ 1.16
DDX55-204ENST00000536079 DPY19L2Q6NUT2 758 aa22.32■■□□□ 1.16
DDX55-204ENST00000536079 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.32■■□□□ 1.16
DDX55-204ENST00000536079 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
DDX55-204ENST00000536079 MED23Q9ULK4 1368 aa22.31■■□□□ 1.16
DDX55-204ENST00000536079 ATP8B2P98198 1209 aa22.31■■□□□ 1.16
DDX55-204ENST00000536079 METTL24Q5JXM2 366 aa22.31■■□□□ 1.16
DDX55-204ENST00000536079 COPRSQ9NQ92 184 aa22.31■■□□□ 1.16
DDX55-204ENST00000536079 ZBTB40Q9NUA8 1239 aa22.31■■□□□ 1.16
DDX55-204ENST00000536079 GJA3Q9Y6H8 435 aa22.31■■□□□ 1.16
DDX55-204ENST00000536079 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.31■■□□□ 1.16
DDX55-204ENST00000536079 MROH5Q6ZUA9 1318 aa22.31■■□□□ 1.16
DDX55-204ENST00000536079 KCNJ4P48050 445 aa22.3■■□□□ 1.16
DDX55-204ENST00000536079 POLA2Q14181 598 aa22.3■■□□□ 1.16
DDX55-204ENST00000536079 CEP85Q6P2H3 762 aa22.29■■□□□ 1.16
DDX55-204ENST00000536079 GPC2Q8N158 579 aa22.29■■□□□ 1.16
DDX55-204ENST00000536079 DDX19BQ9UMR2 479 aa22.29■■□□□ 1.16
DDX55-204ENST00000536079 PSMD14O00487 310 aa22.28■■□□□ 1.16
DDX55-204ENST00000536079 CIAO1O76071 339 aa22.28■■□□□ 1.16
DDX55-204ENST00000536079 CIAPIN1Q6FI81 312 aa22.28■■□□□ 1.16
DDX55-204ENST00000536079 L3MBTL3Q96JM7 780 aaPredicted RBP22.28■■□□□ 1.16
DDX55-204ENST00000536079 WDR90Q96KV7 1748 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms