RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 RBM26Q5T8P6 1007 aaKnown RBP27.67■■■□□ 2.02
SSH3-211ENST00000534112 RIC3Q7Z5B4 369 aa27.67■■■□□ 2.02
SSH3-211ENST00000534112 ZBTB38Q8NAP3 1195 aaPredicted RBP27.67■■■□□ 2.02
SSH3-211ENST00000534112 ZC3H12CQ9C0D7 883 aaKnown RBP27.66■■■□□ 2.02
SSH3-211ENST00000534112 COL4A1P02462 1669 aa27.65■■■□□ 2.02
SSH3-211ENST00000534112 ZNF853P0CG23 659 aa27.65■■■□□ 2.02
SSH3-211ENST00000534112 GOLGA2Q08379 1002 aa27.65■■■□□ 2.02
SSH3-211ENST00000534112 DCPSQ96C86 337 aaKnown RBP27.65■■■□□ 2.02
SSH3-211ENST00000534112 SEC31BQ9NQW1 1179 aa27.65■■■□□ 2.02
SSH3-211ENST00000534112 PODXL2Q9NZ53 605 aa27.65■■■□□ 2.02
SSH3-211ENST00000534112 VIL1P09327 827 aaKnown RBP27.64■■■□□ 2.02
SSH3-211ENST00000534112 MCOLN1Q9GZU1 580 aa27.64■■■□□ 2.02
SSH3-211ENST00000534112 PHAXQ9H814 394 aaKnown RBP27.64■■■□□ 2.02
SSH3-211ENST00000534112 GBA2Q9HCG7 927 aaPredicted RBP27.64■■■□□ 2.02
SSH3-211ENST00000534112 ADM5C9JUS6 153 aa27.63■■■□□ 2.01
SSH3-211ENST00000534112 HSP90B1P14625 803 aaKnown RBP27.63■■■□□ 2.01
SSH3-211ENST00000534112 RGS19P49795 217 aa27.63■■■□□ 2.01
SSH3-211ENST00000534112 RGMBQ6NW40 437 aa27.63■■■□□ 2.01
SSH3-211ENST00000534112 C2orf69Q8N8R5 385 aa27.63■■■□□ 2.01
SSH3-211ENST00000534112 ANKIB1Q9P2G1 1089 aa27.62■■■□□ 2.01
SSH3-211ENST00000534112 FAM155AB1AL88 458 aaPredicted RBP27.61■■■□□ 2.01
SSH3-211ENST00000534112 ELL2O00472 640 aaPredicted RBP27.61■■■□□ 2.01
SSH3-211ENST00000534112 UFL1O94874 794 aa27.61■■■□□ 2.01
SSH3-211ENST00000534112 KIF4BQ2VIQ3 1234 aa27.61■■■□□ 2.01
SSH3-211ENST00000534112 MYD88Q99836 296 aa27.61■■■□□ 2.01
SSH3-211ENST00000534112 GGA1Q9UJY5 639 aa27.61■■■□□ 2.01
SSH3-211ENST00000534112 G3V3G9 751 aa27.6■■■□□ 2.01
SSH3-211ENST00000534112 MLLT1Q03111 559 aaPredicted RBP27.6■■■□□ 2.01
SSH3-211ENST00000534112 CCDC152Q4G0S7 254 aa27.6■■■□□ 2.01
SSH3-211ENST00000534112 DCAF8Q5TAQ9 597 aa27.6■■■□□ 2.01
SSH3-211ENST00000534112 CCDC191Q8NCU4 936 aa27.6■■■□□ 2.01
SSH3-211ENST00000534112 IFT57Q9NWB7 429 aa27.6■■■□□ 2.01
SSH3-211ENST00000534112 PCCAP05165 728 aaPredicted RBP27.59■■■□□ 2.01
SSH3-211ENST00000534112 CCDC102AQ96A19 550 aa27.59■■■□□ 2.01
SSH3-211ENST00000534112 APAF1O14727 1248 aa27.58■■■□□ 2.01
SSH3-211ENST00000534112 PDE8AO60658 829 aa27.58■■■□□ 2.01
SSH3-211ENST00000534112 ZNF157P51786 506 aaPredicted RBP27.58■■■□□ 2.01
SSH3-211ENST00000534112 GNAI1P63096 354 aa27.58■■■□□ 2.01
SSH3-211ENST00000534112 DGKZQ13574 1117 aa27.58■■■□□ 2.01
SSH3-211ENST00000534112 SULF1Q8IWU6 871 aa27.58■■■□□ 2.01
SSH3-211ENST00000534112 JARID2Q92833 1246 aaPredicted RBP27.58■■■□□ 2.01
SSH3-211ENST00000534112 GGA3Q9NZ52 723 aa27.58■■■□□ 2.01
SSH3-211ENST00000534112 CWC25Q9NXE8 425 aaPredicted RBP27.57■■■□□ 2
SSH3-211ENST00000534112 ASTN2O75129 1339 aaPredicted RBP27.57■■■□□ 2
SSH3-211ENST00000534112 ZNF280AP59817 542 aaPredicted RBP27.56■■■□□ 2
SSH3-211ENST00000534112 KIF23Q02241 960 aaPredicted RBP27.56■■■□□ 2
SSH3-211ENST00000534112 CALD1Q05682 793 aaKnown RBP27.56■■■□□ 2
SSH3-211ENST00000534112 CCDC85AQ96PX6 553 aaPredicted RBP27.56■■■□□ 2
SSH3-211ENST00000534112 CASP8AP2Q9UKL3 1982 aa27.56■■■□□ 2
SSH3-211ENST00000534112 RSBN1LQ6PCB5 846 aaPredicted RBP27.55■■■□□ 2
SSH3-211ENST00000534112 C8orf58Q8NAV2 365 aa27.55■■■□□ 2
SSH3-211ENST00000534112 AGBL3Q8NEM8 1001 aa27.55■■■□□ 2
SSH3-211ENST00000534112 METTL22Q9BUU2 404 aaPredicted RBP27.55■■■□□ 2
SSH3-211ENST00000534112 SAGE1Q9NXZ1 904 aa27.54■■■□□ 2
SSH3-211ENST00000534112 SCARF1Q14162 830 aa27.53■■■□□ 2
SSH3-211ENST00000534112 ANKRD18AQ8IVF6 992 aa27.53■■■□□ 2
SSH3-211ENST00000534112 CDCA5Q96FF9 252 aa27.53■■■□□ 2
SSH3-211ENST00000534112 PRKRIP1Q9H875 184 aaPredicted RBP27.53■■■□□ 2
SSH3-211ENST00000534112 XDHP47989 1333 aa27.52■■■□□ 2
SSH3-211ENST00000534112 POLR2AP24928 1970 aaKnown RBP27.52■■■□□ 2
SSH3-211ENST00000534112 DDX58O95786 925 aaKnown RBP27.52■■■□□ 2
SSH3-211ENST00000534112 GMLQ99445 158 aa27.52■■■□□ 2
SSH3-211ENST00000534112 SCN9AQ15858 1988 aa27.51■■■□□ 2
SSH3-211ENST00000534112 SLC10A3P09131 477 aa27.51■■□□□ 1.99
SSH3-211ENST00000534112 ANGEL2Q5VTE6 544 aaKnown RBP27.51■■□□□ 1.99
SSH3-211ENST00000534112 CCDC30Q5VVM6 783 aa27.51■■□□□ 1.99
SSH3-211ENST00000534112 RNF186Q9NXI6 227 aa27.51■■□□□ 1.99
SSH3-211ENST00000534112 TRPA1O75762 1119 aa27.5■■□□□ 1.99
SSH3-211ENST00000534112 ATP2B4P23634 1241 aa27.5■■□□□ 1.99
SSH3-211ENST00000534112 CSRNP1Q96S65 589 aa27.5■■□□□ 1.99
SSH3-211ENST00000534112 CHMP4AQ9BY43 222 aa27.5■■□□□ 1.99
SSH3-211ENST00000534112 ZNF609O15014 1411 aa27.5■■□□□ 1.99
SSH3-211ENST00000534112 USP17L8P0C7I0 530 aa27.49■■□□□ 1.99
SSH3-211ENST00000534112 PODNQ7Z5L7 613 aa27.49■■□□□ 1.99
SSH3-211ENST00000534112 MAP3K2Q9Y2U5 619 aa27.49■■□□□ 1.99
SSH3-211ENST00000534112 USP17L3A6NCW0 530 aa27.48■■□□□ 1.99
SSH3-211ENST00000534112 USP17L4A6NCW7 530 aa27.48■■□□□ 1.99
SSH3-211ENST00000534112 USP17L1Q7RTZ2 530 aa27.48■■□□□ 1.99
SSH3-211ENST00000534112 MYOZ2Q9NPC6 264 aa27.48■■□□□ 1.99
SSH3-211ENST00000534112 WTIPA6NIX2 430 aaPredicted RBP27.47■■□□□ 1.99
SSH3-211ENST00000534112 CTSWP56202 376 aa27.47■■□□□ 1.99
SSH3-211ENST00000534112 TSPYL6Q8N831 410 aa27.47■■□□□ 1.99
SSH3-211ENST00000534112 CDC5LQ99459 802 aaKnown RBP27.47■■□□□ 1.99
SSH3-211ENST00000534112 IGKV5-2P06315 115 aa27.46■■□□□ 1.99
SSH3-211ENST00000534112 KSR2Q6VAB6 950 aa27.46■■□□□ 1.99
SSH3-211ENST00000534112 PI4KAP2A4QPH2 592 aa27.45■■□□□ 1.98
SSH3-211ENST00000534112 FKBP1BP68106 108 aa27.45■■□□□ 1.98
SSH3-211ENST00000534112 PI4KAP1Q8N8J0 262 aa27.45■■□□□ 1.98
SSH3-211ENST00000534112 TTLL11Q8NHH1 800 aa27.45■■□□□ 1.98
SSH3-211ENST00000534112 BSDC1Q9NW68 430 aaPredicted RBP27.45■■□□□ 1.98
SSH3-211ENST00000534112 MINPP1Q9UNW1 487 aa27.45■■□□□ 1.98
SSH3-211ENST00000534112 PITPNM2Q9BZ72 1349 aa27.44■■□□□ 1.98
SSH3-211ENST00000534112 SLC34A2O95436 690 aa27.44■■□□□ 1.98
SSH3-211ENST00000534112 RASAL3Q86YV0 1011 aa27.44■■□□□ 1.98
SSH3-211ENST00000534112 REM2Q8IYK8 340 aaPredicted RBP27.43■■□□□ 1.98
SSH3-211ENST00000534112 GREM2Q9H772 168 aa27.43■■□□□ 1.98
SSH3-211ENST00000534112 SCAF8Q9UPN6 1271 aaKnown RBP27.43■■□□□ 1.98
SSH3-211ENST00000534112 MED23Q9ULK4 1368 aa27.41■■□□□ 1.98
SSH3-211ENST00000534112 NEXNQ0ZGT2 675 aa27.4■■□□□ 1.98
SSH3-211ENST00000534112 NBPF9Q3BBW0 867 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms