RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
SSBP3-215ENST00000533946 KAZALD1Q96I82 304 aa12.34□□□□□ -0.43
SSBP3-215ENST00000533946 ASTN2O75129 1339 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-215ENST00000533946 ZNF646O15015 1829 aaPredicted RBP12.33□□□□□ -0.44
SSBP3-215ENST00000533946 POLR2AP24928 1970 aaKnown RBP12.33□□□□□ -0.44
SSBP3-215ENST00000533946 WASHC4Q2M389 1173 aa12.33□□□□□ -0.44
SSBP3-215ENST00000533946 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
SSBP3-215ENST00000533946 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
SSBP3-215ENST00000533946 KLRG1Q96E93 195 aa12.33□□□□□ -0.44
SSBP3-215ENST00000533946 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
SSBP3-215ENST00000533946 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
SSBP3-215ENST00000533946 ECE2O60344 883 aa12.32□□□□□ -0.44
SSBP3-215ENST00000533946 UFL1O94874 794 aa12.32□□□□□ -0.44
SSBP3-215ENST00000533946 CCDC152Q4G0S7 254 aa12.32□□□□□ -0.44
SSBP3-215ENST00000533946 SAMD7Q7Z3H4 446 aa12.32□□□□□ -0.44
SSBP3-215ENST00000533946 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
SSBP3-215ENST00000533946 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
SSBP3-215ENST00000533946 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
SSBP3-215ENST00000533946 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
SSBP3-215ENST00000533946 SCAF8Q9UPN6 1271 aaKnown RBP12.32□□□□□ -0.44
SSBP3-215ENST00000533946 IQCA1LA6NCM1 817 aa12.31□□□□□ -0.44
SSBP3-215ENST00000533946 CSF1RP07333 972 aa12.31□□□□□ -0.44
SSBP3-215ENST00000533946 NEXNQ0ZGT2 675 aa12.31□□□□□ -0.44
SSBP3-215ENST00000533946 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
SSBP3-215ENST00000533946 SLC4A10Q6U841 1118 aa12.31□□□□□ -0.44
SSBP3-215ENST00000533946 TRMT2AQ8IZ69 625 aaKnown RBP12.31□□□□□ -0.44
SSBP3-215ENST00000533946 LINS1Q8NG48 757 aa12.31□□□□□ -0.44
SSBP3-215ENST00000533946 MYH16Q9H6N6 1097 aa12.31□□□□□ -0.44
SSBP3-215ENST00000533946 TNNQ9UQP3 1299 aa12.31□□□□□ -0.44
SSBP3-215ENST00000533946 A0A1B0GUL6 1792 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 TAF5LO75529 589 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 NBPF7P0C2Y1 421 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-215ENST00000533946 ITGA6P23229 1130 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 CST9Q5W186 159 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 ANKRD18AQ8IVF6 992 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 SUPT20HQ8NEM7 779 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 GLIS2Q9BZE0 524 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-215ENST00000533946 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
SSBP3-215ENST00000533946 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
SSBP3-215ENST00000533946 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-215ENST00000533946 GRIPAP1Q4V328 841 aa12.29□□□□□ -0.44
SSBP3-215ENST00000533946 RBM26Q5T8P6 1007 aaKnown RBP12.29□□□□□ -0.44
SSBP3-215ENST00000533946 PLA2G12BQ9BX93 195 aa12.29□□□□□ -0.44
SSBP3-215ENST00000533946 GGA1Q9UJY5 639 aa12.29□□□□□ -0.44
SSBP3-215ENST00000533946 LMBR1LQ6UX01 489 aa12.28□□□□□ -0.44
SSBP3-215ENST00000533946 MICALL2Q8IY33 904 aa12.28□□□□□ -0.44
SSBP3-215ENST00000533946 JMYQ8N9B5 988 aa12.28□□□□□ -0.44
SSBP3-215ENST00000533946 PUS3Q9BZE2 481 aaKnown RBP12.28□□□□□ -0.44
SSBP3-215ENST00000533946 TMX4Q9H1E5 349 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-215ENST00000533946 IRS2Q9Y4H2 1338 aa12.28□□□□□ -0.44
SSBP3-215ENST00000533946 CCER2I3L3R5 266 aa12.27□□□□□ -0.45
SSBP3-215ENST00000533946 TMC4Q7Z404 712 aa12.27□□□□□ -0.45
SSBP3-215ENST00000533946 VPS33BQ9H267 617 aa12.27□□□□□ -0.45
SSBP3-215ENST00000533946 ADARB2Q9NS39 739 aaKnown RBP12.27□□□□□ -0.45
SSBP3-215ENST00000533946 BSDC1Q9NW68 430 aaPredicted RBP12.27□□□□□ -0.45
SSBP3-215ENST00000533946 PSME4Q14997 1843 aa12.27□□□□□ -0.45
SSBP3-215ENST00000533946 E9PSI1 815 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 GRM8O00222 908 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-215ENST00000533946 VEGFBP49765 207 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 CCT4P50991 539 aaKnown RBP12.26□□□□□ -0.45
SSBP3-215ENST00000533946 CHRNDQ07001 517 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 KLHDC4Q8TBB5 520 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 GMLQ99445 158 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 ZC3H12CQ9C0D7 883 aaKnown RBP12.26□□□□□ -0.45
SSBP3-215ENST00000533946 JAG2Q9Y219 1238 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 PCDHAC2Q9Y5I4 1007 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 XDHP47989 1333 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 AOX1Q06278 1338 aa12.26□□□□□ -0.45
SSBP3-215ENST00000533946 ADM5C9JUS6 153 aa12.25□□□□□ -0.45
SSBP3-215ENST00000533946 VIL1P09327 827 aaKnown RBP12.25□□□□□ -0.45
SSBP3-215ENST00000533946 COL13A1Q5TAT6 717 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-215ENST00000533946 USP50Q70EL3 339 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-215ENST00000533946 USP48Q86UV5 1035 aa12.25□□□□□ -0.45
SSBP3-215ENST00000533946 PNMA8AQ86V59 439 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-215ENST00000533946 CREBZFQ9NS37 354 aa12.25□□□□□ -0.45
SSBP3-215ENST00000533946 TRPM7Q96QT4 1865 aa12.25□□□□□ -0.45
SSBP3-215ENST00000533946 TMEM88BA6NKF7 163 aa12.24□□□□□ -0.45
SSBP3-215ENST00000533946 PLIN1O60240 522 aa12.24□□□□□ -0.45
SSBP3-215ENST00000533946 CNTNAP1P78357 1384 aa12.24□□□□□ -0.45
SSBP3-215ENST00000533946 TNIP1Q15025 636 aa12.24□□□□□ -0.45
SSBP3-215ENST00000533946 DIEXFQ68CQ4 756 aaKnown RBP12.24□□□□□ -0.45
SSBP3-215ENST00000533946 ZIC5Q96T25 663 aa12.24□□□□□ -0.45
SSBP3-215ENST00000533946 CDC5LQ99459 802 aaKnown RBP12.24□□□□□ -0.45
SSBP3-215ENST00000533946 SRCIN1Q9C0H9 1055 aa12.24□□□□□ -0.45
SSBP3-215ENST00000533946 USP44Q9H0E7 712 aa12.24□□□□□ -0.45
SSBP3-215ENST00000533946 BICC1Q9H694 974 aaKnown RBP12.24□□□□□ -0.45
SSBP3-215ENST00000533946 PGAP2Q9UHJ9 254 aa12.24□□□□□ -0.45
SSBP3-215ENST00000533946 ZNF804BA4D1E1 1349 aa12.23□□□□□ -0.45
SSBP3-215ENST00000533946 HSPA1AP0DMV8 641 aaKnown RBP12.23□□□□□ -0.45
SSBP3-215ENST00000533946 HSPA1BP0DMV9 641 aaKnown RBP12.23□□□□□ -0.45
SSBP3-215ENST00000533946 ATP2B4P23634 1241 aa12.23□□□□□ -0.45
SSBP3-215ENST00000533946 LRRC24Q50LG9 513 aa12.23□□□□□ -0.45
SSBP3-215ENST00000533946 DACT2Q5SW24 774 aa12.23□□□□□ -0.45
SSBP3-215ENST00000533946 PRAMEF18Q5VWM3 479 aa12.23□□□□□ -0.45
SSBP3-215ENST00000533946 EYA3Q99504 573 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms