RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ATF7IPQ6VMQ6 1270 aa25.77■■□□□ 1.72
CCS-208ENST00000533244 L3MBTL3Q96JM7 780 aaPredicted RBP25.77■■□□□ 1.72
CCS-208ENST00000533244 BICC1Q9H694 974 aaKnown RBP25.76■■□□□ 1.71
CCS-208ENST00000533244 C6orf229H3BNL8 230 aa25.75■■□□□ 1.71
CCS-208ENST00000533244 VEGFAP15692 232 aaPredicted RBP25.75■■□□□ 1.71
CCS-208ENST00000533244 WASHC4Q2M389 1173 aa25.75■■□□□ 1.71
CCS-208ENST00000533244 ANKRD44Q8N8A2 993 aa25.75■■□□□ 1.71
CCS-208ENST00000533244 EYA3Q99504 573 aa25.75■■□□□ 1.71
CCS-208ENST00000533244 ANKIB1Q9P2G1 1089 aa25.75■■□□□ 1.71
CCS-208ENST00000533244 GGA1Q9UJY5 639 aa25.75■■□□□ 1.71
CCS-208ENST00000533244 UFL1O94874 794 aa25.74■■□□□ 1.71
CCS-208ENST00000533244 EIF6P56537 245 aaKnown RBP25.74■■□□□ 1.71
CCS-208ENST00000533244 C1QTNF8P60827 252 aa25.74■■□□□ 1.71
CCS-208ENST00000533244 GPC2Q8N158 579 aa25.74■■□□□ 1.71
CCS-208ENST00000533244 FRAT1Q92837 279 aaPredicted RBP25.74■■□□□ 1.71
CCS-208ENST00000533244 MPHOSPH8Q99549 860 aa25.74■■□□□ 1.71
CCS-208ENST00000533244 ZNRF3Q9ULT6 936 aa25.74■■□□□ 1.71
CCS-208ENST00000533244 TNNQ9UQP3 1299 aa25.74■■□□□ 1.71
CCS-208ENST00000533244 CHMP3Q9Y3E7 222 aa25.74■■□□□ 1.71
CCS-208ENST00000533244 A0A1B0GUL6 1792 aa25.73■■□□□ 1.71
CCS-208ENST00000533244 CCDC57Q2TAC2 916 aa25.73■■□□□ 1.71
CCS-208ENST00000533244 SCN4AP35499 1836 aa25.73■■□□□ 1.71
CCS-208ENST00000533244 ATP2B4P23634 1241 aa25.72■■□□□ 1.71
CCS-208ENST00000533244 ZKSCAN2Q63HK3 967 aa25.72■■□□□ 1.71
CCS-208ENST00000533244 GPR101Q96P66 508 aaPredicted RBP25.72■■□□□ 1.71
CCS-208ENST00000533244 TOMM70O94826 608 aa25.71■■□□□ 1.71
CCS-208ENST00000533244 YDJCA8MPS7 323 aa25.71■■□□□ 1.71
CCS-208ENST00000533244 RIMBP2O15034 1052 aa25.7■■□□□ 1.7
CCS-208ENST00000533244 UBTFL1P0CB47 393 aaPredicted RBP25.7■■□□□ 1.7
CCS-208ENST00000533244 CXCL9Q07325 125 aa25.7■■□□□ 1.7
CCS-208ENST00000533244 ZNF594Q96JF6 807 aaPredicted RBP25.7■■□□□ 1.7
CCS-208ENST00000533244 ANKRD2Q9GZV1 360 aa25.7■■□□□ 1.7
CCS-208ENST00000533244 WTIPA6NIX2 430 aaPredicted RBP25.69■■□□□ 1.7
CCS-208ENST00000533244 CHRNDQ07001 517 aa25.69■■□□□ 1.7
CCS-208ENST00000533244 MEIS3Q99687 375 aa25.69■■□□□ 1.7
CCS-208ENST00000533244 ZC3H12CQ9C0D7 883 aaKnown RBP25.69■■□□□ 1.7
CCS-208ENST00000533244 LEMD3Q9Y2U8 911 aa25.69■■□□□ 1.7
CCS-208ENST00000533244 MED23Q9ULK4 1368 aa25.69■■□□□ 1.7
CCS-208ENST00000533244 IQCA1LA6NCM1 817 aa25.68■■□□□ 1.7
CCS-208ENST00000533244 RBM46Q8TBY0 533 aaKnown RBP25.68■■□□□ 1.7
CCS-208ENST00000533244 LDHAL6AQ6ZMR3 332 aa25.67■■□□□ 1.7
CCS-208ENST00000533244 C16orf71Q8IYS4 520 aaPredicted RBP25.67■■□□□ 1.7
CCS-208ENST00000533244 CLUAP1Q96AJ1 413 aa25.67■■□□□ 1.7
CCS-208ENST00000533244 DBNDD1Q9H9R9 158 aa25.67■■□□□ 1.7
CCS-208ENST00000533244 ECE2O60344 883 aa25.66■■□□□ 1.7
CCS-208ENST00000533244 TAF7LQ5H9L4 462 aa25.66■■□□□ 1.7
CCS-208ENST00000533244 CIAPIN1Q6FI81 312 aa25.66■■□□□ 1.7
CCS-208ENST00000533244 GJA3Q9Y6H8 435 aa25.66■■□□□ 1.7
CCS-208ENST00000533244 SCNN1DP51172 638 aa25.65■■□□□ 1.7
CCS-208ENST00000533244 DOK7Q18PE1 504 aa25.65■■□□□ 1.7
CCS-208ENST00000533244 HDAC5Q9UQL6 1122 aa25.65■■□□□ 1.7
CCS-208ENST00000533244 SCN9AQ15858 1988 aa25.65■■□□□ 1.7
CCS-208ENST00000533244 ZNF804BA4D1E1 1349 aa25.65■■□□□ 1.7
CCS-208ENST00000533244 TMEM57Q8N5G2 664 aa25.64■■□□□ 1.7
CCS-208ENST00000533244 TAF1DQ9H5J8 278 aaPredicted RBP25.64■■□□□ 1.7
CCS-208ENST00000533244 HACL1Q9UJ83 578 aa25.64■■□□□ 1.7
CCS-208ENST00000533244 RAD17O75943 681 aa25.63■■□□□ 1.69
CCS-208ENST00000533244 GNAI3P08754 354 aa25.63■■□□□ 1.69
CCS-208ENST00000533244 RFX5P48382 616 aaPredicted RBP25.63■■□□□ 1.69
CCS-208ENST00000533244 TNIP1Q15025 636 aa25.63■■□□□ 1.69
CCS-208ENST00000533244 CNNM1Q9NRU3 951 aa25.63■■□□□ 1.69
CCS-208ENST00000533244 LRRFIP2Q9Y608 721 aaKnown RBP25.63■■□□□ 1.69
CCS-208ENST00000533244 IRS2Q9Y4H2 1338 aa25.63■■□□□ 1.69
CCS-208ENST00000533244 PSME4Q14997 1843 aa25.63■■□□□ 1.69
CCS-208ENST00000533244 PUS3Q9BZE2 481 aaKnown RBP25.63■■□□□ 1.69
CCS-208ENST00000533244 RIPOR2Q9Y4F9 1068 aa25.63■■□□□ 1.69
CCS-208ENST00000533244 ADAMTSL1Q8N6G6 1762 aa25.62■■□□□ 1.69
CCS-208ENST00000533244 TXNRD3Q86VQ6 643 aa25.62■■□□□ 1.69
CCS-208ENST00000533244 DZIP1LQ8IYY4 767 aaKnown RBP25.62■■□□□ 1.69
CCS-208ENST00000533244 TAF5LO75529 589 aa25.61■■□□□ 1.69
CCS-208ENST00000533244 RLBP1P12271 317 aa25.61■■□□□ 1.69
CCS-208ENST00000533244 KLRK1P26718 216 aa25.61■■□□□ 1.69
CCS-208ENST00000533244 FSTL1Q12841 308 aa25.61■■□□□ 1.69
CCS-208ENST00000533244 C15orf52Q6ZUT6 534 aaKnown RBP25.61■■□□□ 1.69
CCS-208ENST00000533244 HELBQ8NG08 1087 aaPredicted RBP25.61■■□□□ 1.69
CCS-208ENST00000533244 KCNQ5Q9NR82 932 aa25.61■■□□□ 1.69
CCS-208ENST00000533244 RCAN3Q9UKA8 241 aa25.61■■□□□ 1.69
CCS-208ENST00000533244 PSMD14O00487 310 aa25.6■■□□□ 1.69
CCS-208ENST00000533244 EPHX2P34913 555 aa25.6■■□□□ 1.69
CCS-208ENST00000533244 PODNQ7Z5L7 613 aa25.6■■□□□ 1.69
CCS-208ENST00000533244 GPRC5DQ9NZD1 345 aa25.6■■□□□ 1.69
CCS-208ENST00000533244 ZNF609O15014 1411 aa25.59■■□□□ 1.69
CCS-208ENST00000533244 SNAP23O00161 211 aa25.59■■□□□ 1.69
CCS-208ENST00000533244 GMPSP49915 693 aaPredicted RBP25.59■■□□□ 1.69
CCS-208ENST00000533244 PTPN12Q05209 780 aaKnown RBP25.59■■□□□ 1.69
CCS-208ENST00000533244 FTSJ3Q8IY81 847 aaKnown RBP25.59■■□□□ 1.69
CCS-208ENST00000533244 SMC1BQ8NDV3 1235 aa25.59■■□□□ 1.69
CCS-208ENST00000533244 KLHDC4Q8TBB5 520 aa25.59■■□□□ 1.69
CCS-208ENST00000533244 ZNF646O15015 1829 aaPredicted RBP25.58■■□□□ 1.69
CCS-208ENST00000533244 POTEIP0CG38 1075 aa25.58■■□□□ 1.69
CCS-208ENST00000533244 POTEJP0CG39 1038 aa25.58■■□□□ 1.69
CCS-208ENST00000533244 LMOD1P29536 600 aaPredicted RBP25.58■■□□□ 1.69
CCS-208ENST00000533244 EPS15P42566 896 aa25.58■■□□□ 1.69
CCS-208ENST00000533244 KCNJ4P48050 445 aa25.58■■□□□ 1.69
CCS-208ENST00000533244 MTX1Q13505 466 aa25.58■■□□□ 1.69
CCS-208ENST00000533244 LRRC24Q50LG9 513 aa25.58■■□□□ 1.69
CCS-208ENST00000533244 COA1Q9GZY4 146 aa25.58■■□□□ 1.69
CCS-208ENST00000533244 MROH5Q6ZUA9 1318 aa25.58■■□□□ 1.69
CCS-208ENST00000533244 G3V3G9 751 aa25.57■■□□□ 1.68
CCS-208ENST00000533244 VIL1P09327 827 aaKnown RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms