RNA–Protein interactions for RNA: ENST00000532460.5

CSRP1-216, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSRP1, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-216ENST00000532460 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
CSRP1-216ENST00000532460 MYD88Q99836 296 aa13.74□□□□□ -0.21
CSRP1-216ENST00000532460 ZNF277Q9NRM2 450 aaPredicted RBP13.74□□□□□ -0.21
CSRP1-216ENST00000532460 TRMT112Q9UI30 125 aaKnown RBP13.74□□□□□ -0.21
CSRP1-216ENST00000532460 SMARCA5O60264 1052 aaPredicted RBP13.73□□□□□ -0.21
CSRP1-216ENST00000532460 DDNO94850 711 aaPredicted RBP13.73□□□□□ -0.21
CSRP1-216ENST00000532460 TRIM28Q13263 835 aaKnown RBP13.73□□□□□ -0.21
CSRP1-216ENST00000532460 SMC1BQ8NDV3 1235 aa13.73□□□□□ -0.21
CSRP1-216ENST00000532460 KIF1BPQ96EK5 621 aa13.73□□□□□ -0.21
CSRP1-216ENST00000532460 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
CSRP1-216ENST00000532460 ISCA1Q9BUE6 129 aa13.73□□□□□ -0.21
CSRP1-216ENST00000532460 STAP2Q9UGK3 403 aa13.73□□□□□ -0.21
CSRP1-216ENST00000532460 SH3TC1Q8TE82 1336 aa13.72□□□□□ -0.21
CSRP1-216ENST00000532460 ARFGEF2Q9Y6D5 1785 aa13.72□□□□□ -0.21
CSRP1-216ENST00000532460 SNED1Q8TER0 1413 aa13.72□□□□□ -0.21
CSRP1-216ENST00000532460 SURF6O75683 361 aaKnown RBP13.72□□□□□ -0.21
CSRP1-216ENST00000532460 GSPT1P15170 499 aaKnown RBP13.72□□□□□ -0.21
CSRP1-216ENST00000532460 PDE1AP54750 535 aa13.72□□□□□ -0.21
CSRP1-216ENST00000532460 KAZALD1Q96I82 304 aa13.72□□□□□ -0.21
CSRP1-216ENST00000532460 SUCLG2Q96I99 432 aa13.72□□□□□ -0.21
CSRP1-216ENST00000532460 AOX1Q06278 1338 aa13.72□□□□□ -0.21
CSRP1-216ENST00000532460 TNRC6CQ9HCJ0 1690 aaKnown RBP13.71□□□□□ -0.21
CSRP1-216ENST00000532460 FZD9O00144 591 aa13.71□□□□□ -0.21
CSRP1-216ENST00000532460 CDC45O75419 566 aa13.71□□□□□ -0.21
CSRP1-216ENST00000532460 BBOX1O75936 387 aa13.71□□□□□ -0.21
CSRP1-216ENST00000532460 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
CSRP1-216ENST00000532460 IARSP41252 1262 aaKnown RBP13.71□□□□□ -0.21
CSRP1-216ENST00000532460 ERC1Q8IUD2 1116 aa13.71□□□□□ -0.21
CSRP1-216ENST00000532460 RHPN1Q8TCX5 695 aa13.71□□□□□ -0.21
CSRP1-216ENST00000532460 OTUD7AQ8TE49 926 aaPredicted RBP13.71□□□□□ -0.21
CSRP1-216ENST00000532460 APBB1O00213 710 aa13.7□□□□□ -0.22
CSRP1-216ENST00000532460 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
CSRP1-216ENST00000532460 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
CSRP1-216ENST00000532460 DNAJC5GQ8N7S2 189 aa13.7□□□□□ -0.22
CSRP1-216ENST00000532460 CCDC191Q8NCU4 936 aa13.7□□□□□ -0.22
CSRP1-216ENST00000532460 L3MBTL3Q96JM7 780 aaPredicted RBP13.7□□□□□ -0.22
CSRP1-216ENST00000532460 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
CSRP1-216ENST00000532460 ATP6V0A2Q9Y487 856 aa13.7□□□□□ -0.22
CSRP1-216ENST00000532460 ATP5J2-PTCD1G3V325 749 aa13.69□□□□□ -0.22
CSRP1-216ENST00000532460 H7C1W4 665 aa13.69□□□□□ -0.22
CSRP1-216ENST00000532460 CASP7P55210 303 aa13.69□□□□□ -0.22
CSRP1-216ENST00000532460 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
CSRP1-216ENST00000532460 VPS33BQ9H267 617 aa13.69□□□□□ -0.22
CSRP1-216ENST00000532460 CCDC88AQ3V6T2 1871 aa13.69□□□□□ -0.22
CSRP1-216ENST00000532460 WDR90Q96KV7 1748 aa13.69□□□□□ -0.22
CSRP1-216ENST00000532460 MX1P20591 662 aa13.68□□□□□ -0.22
CSRP1-216ENST00000532460 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
CSRP1-216ENST00000532460 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
CSRP1-216ENST00000532460 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
CSRP1-216ENST00000532460 FAM89AQ96GI7 184 aa13.68□□□□□ -0.22
CSRP1-216ENST00000532460 TMX4Q9H1E5 349 aaPredicted RBP13.68□□□□□ -0.22
CSRP1-216ENST00000532460 CWC25Q9NXE8 425 aaPredicted RBP13.68□□□□□ -0.22
CSRP1-216ENST00000532460 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
CSRP1-216ENST00000532460 IQCA1LA6NCM1 817 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 SDSP20132 328 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 GRAPQ13588 217 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 SF3B3Q15393 1217 aaKnown RBP13.67□□□□□ -0.22
CSRP1-216ENST00000532460 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
CSRP1-216ENST00000532460 RTFDC1Q9BY42 306 aaPredicted RBP13.67□□□□□ -0.22
CSRP1-216ENST00000532460 C22orf23Q9BZE7 217 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 TIAM2Q8IVF5 1701 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 RBM25P49756 843 aaKnown RBP13.67□□□□□ -0.22
CSRP1-216ENST00000532460 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
CSRP1-216ENST00000532460 SLC51AQ86UW1 340 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 GPC2Q8N158 579 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 ZNF541Q9H0D2 1346 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
CSRP1-216ENST00000532460 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
CSRP1-216ENST00000532460 CASC1Q6TDU7 716 aa13.66□□□□□ -0.22
CSRP1-216ENST00000532460 TMC4Q7Z404 712 aa13.66□□□□□ -0.22
CSRP1-216ENST00000532460 LARGE2Q8N3Y3 721 aa13.66□□□□□ -0.22
CSRP1-216ENST00000532460 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
CSRP1-216ENST00000532460 CEP350Q5VT06 3117 aa13.65□□□□□ -0.22
CSRP1-216ENST00000532460 IRS4O14654 1257 aaPredicted RBP13.65□□□□□ -0.22
CSRP1-216ENST00000532460 G3BP1Q13283 466 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSRP1-216ENST00000532460 EPHA10Q5JZY3 1008 aa13.65□□□□□ -0.22
CSRP1-216ENST00000532460 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
CSRP1-216ENST00000532460 CLASRPQ8N2M8 674 aaKnown RBP13.65□□□□□ -0.22
CSRP1-216ENST00000532460 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
CSRP1-216ENST00000532460 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
CSRP1-216ENST00000532460 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
CSRP1-216ENST00000532460 HSP90B1P14625 803 aaKnown RBP13.64□□□□□ -0.23
CSRP1-216ENST00000532460 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
CSRP1-216ENST00000532460 EIF6P56537 245 aaKnown RBP13.64□□□□□ -0.23
CSRP1-216ENST00000532460 OS9Q13438 667 aaPredicted RBP13.64□□□□□ -0.23
CSRP1-216ENST00000532460 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
CSRP1-216ENST00000532460 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
CSRP1-216ENST00000532460 MPNDQ8N594 471 aa13.64□□□□□ -0.23
CSRP1-216ENST00000532460 IL1RAPL2Q9NP60 686 aa13.64□□□□□ -0.23
CSRP1-216ENST00000532460 HACL1Q9UJ83 578 aa13.64□□□□□ -0.23
CSRP1-216ENST00000532460 PCCAP05165 728 aaPredicted RBP13.63□□□□□ -0.23
CSRP1-216ENST00000532460 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
CSRP1-216ENST00000532460 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
CSRP1-216ENST00000532460 HTRA3P83110 453 aa13.63□□□□□ -0.23
CSRP1-216ENST00000532460 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
CSRP1-216ENST00000532460 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
CSRP1-216ENST00000532460 PA2G4Q9UQ80 394 aaKnown RBP13.63□□□□□ -0.23
CSRP1-216ENST00000532460 ANKRD36CQ5JPF3 1778 aa13.63□□□□□ -0.23
CSRP1-216ENST00000532460 PPIP5K2O43314 1243 aa13.62□□□□□ -0.23
CSRP1-216ENST00000532460 EPHX2P34913 555 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms