RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ASTN2O75129 1339 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-206ENST00000531430 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-206ENST00000531430 RPS12P25398 132 aaKnown RBP12.04□□□□□ -0.48
NEDD8-206ENST00000531430 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
NEDD8-206ENST00000531430 SCARF1Q14162 830 aa12.04□□□□□ -0.48
NEDD8-206ENST00000531430 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
NEDD8-206ENST00000531430 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
NEDD8-206ENST00000531430 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
NEDD8-206ENST00000531430 TBC1D16Q8TBP0 767 aa12.04□□□□□ -0.48
NEDD8-206ENST00000531430 JARID2Q92833 1246 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-206ENST00000531430 GGA3Q9NZ52 723 aa12.04□□□□□ -0.48
NEDD8-206ENST00000531430 HDAC9Q9UKV0 1011 aa12.04□□□□□ -0.48
NEDD8-206ENST00000531430 SCAF8Q9UPN6 1271 aaKnown RBP12.04□□□□□ -0.48
NEDD8-206ENST00000531430 UFL1O94874 794 aa12.03□□□□□ -0.48
NEDD8-206ENST00000531430 TTLL12Q14166 644 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-206ENST00000531430 SF3B3Q15393 1217 aaKnown RBP12.03□□□□□ -0.48
NEDD8-206ENST00000531430 ANGEL2Q5VTE6 544 aaKnown RBP12.03□□□□□ -0.48
NEDD8-206ENST00000531430 CDCA5Q96FF9 252 aa12.03□□□□□ -0.48
NEDD8-206ENST00000531430 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
NEDD8-206ENST00000531430 THSD7BQ9C0I4 1608 aa12.03□□□□□ -0.48
NEDD8-206ENST00000531430 PRAMEF18Q5VWM3 479 aa12.02□□□□□ -0.49
NEDD8-206ENST00000531430 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
NEDD8-206ENST00000531430 ISCA1Q9BUE6 129 aa12.02□□□□□ -0.49
NEDD8-206ENST00000531430 SEC31BQ9NQW1 1179 aa12.02□□□□□ -0.49
NEDD8-206ENST00000531430 SAGE1Q9NXZ1 904 aa12.02□□□□□ -0.49
NEDD8-206ENST00000531430 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
NEDD8-206ENST00000531430 TBC1D8O95759 1140 aa12.01□□□□□ -0.49
NEDD8-206ENST00000531430 SLC10A3P09131 477 aa12.01□□□□□ -0.49
NEDD8-206ENST00000531430 VIL1P09327 827 aaKnown RBP12.01□□□□□ -0.49
NEDD8-206ENST00000531430 MKRN3Q13064 507 aaKnown RBP12.01□□□□□ -0.49
NEDD8-206ENST00000531430 MOB2Q70IA6 237 aa12.01□□□□□ -0.49
NEDD8-206ENST00000531430 CTU1Q7Z7A3 348 aaKnown RBP12.01□□□□□ -0.49
NEDD8-206ENST00000531430 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
NEDD8-206ENST00000531430 GGA1Q9UJY5 639 aa12.01□□□□□ -0.49
NEDD8-206ENST00000531430 RTL9Q8NET4 1388 aa12.01□□□□□ -0.49
NEDD8-206ENST00000531430 ELL2O00472 640 aaPredicted RBP12□□□□□ -0.49
NEDD8-206ENST00000531430 CHL1O00533 1208 aa12□□□□□ -0.49
NEDD8-206ENST00000531430 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
NEDD8-206ENST00000531430 MYD88Q99836 296 aa12□□□□□ -0.49
NEDD8-206ENST00000531430 HYPKQ9NX55 129 aa12□□□□□ -0.49
NEDD8-206ENST00000531430 PDE4DIPQ5VU43 2346 aa12□□□□□ -0.49
NEDD8-206ENST00000531430 LAMB2P55268 1798 aa12□□□□□ -0.49
NEDD8-206ENST00000531430 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
NEDD8-206ENST00000531430 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
NEDD8-206ENST00000531430 PRKG1Q13976 671 aa11.99□□□□□ -0.49
NEDD8-206ENST00000531430 DUSP27Q5VZP5 1158 aa11.99□□□□□ -0.49
NEDD8-206ENST00000531430 RASAL3Q86YV0 1011 aa11.99□□□□□ -0.49
NEDD8-206ENST00000531430 MYOZ2Q9NPC6 264 aa11.99□□□□□ -0.49
NEDD8-206ENST00000531430 HPS5Q9UPZ3 1129 aa11.99□□□□□ -0.49
NEDD8-206ENST00000531430 ANKRD36CQ5JPF3 1778 aa11.99□□□□□ -0.49
NEDD8-206ENST00000531430 HSP90B1P14625 803 aaKnown RBP11.98□□□□□ -0.49
NEDD8-206ENST00000531430 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-206ENST00000531430 TNRC18O15417 2968 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-206ENST00000531430 AKAP11Q9UKA4 1901 aa11.98□□□□□ -0.49
NEDD8-206ENST00000531430 USP17L3A6NCW0 530 aa11.97□□□□□ -0.49
NEDD8-206ENST00000531430 USP17L4A6NCW7 530 aa11.97□□□□□ -0.49
NEDD8-206ENST00000531430 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
NEDD8-206ENST00000531430 CCDC152Q4G0S7 254 aa11.97□□□□□ -0.49
NEDD8-206ENST00000531430 USP17L1Q7RTZ2 530 aa11.97□□□□□ -0.49
NEDD8-206ENST00000531430 ANKRD18AQ8IVF6 992 aa11.97□□□□□ -0.49
NEDD8-206ENST00000531430 ZBTB38Q8NAP3 1195 aaPredicted RBP11.97□□□□□ -0.49
NEDD8-206ENST00000531430 AGBL3Q8NEM8 1001 aa11.97□□□□□ -0.49
NEDD8-206ENST00000531430 ZNF296Q8WUU4 475 aaPredicted RBP11.97□□□□□ -0.49
NEDD8-206ENST00000531430 PHAXQ9H814 394 aaKnown RBP11.97□□□□□ -0.49
NEDD8-206ENST00000531430 NF2P35240 595 aa11.96□□□□□ -0.49
NEDD8-206ENST00000531430 ZNF280AP59817 542 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-206ENST00000531430 NBPF9Q3BBW0 867 aa11.96□□□□□ -0.49
NEDD8-206ENST00000531430 OGFOD1Q8N543 542 aa11.96□□□□□ -0.49
NEDD8-206ENST00000531430 RUNDC1Q96C34 613 aa11.96□□□□□ -0.49
NEDD8-206ENST00000531430 MXD3Q9BW11 206 aa11.96□□□□□ -0.49
NEDD8-206ENST00000531430 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
NEDD8-206ENST00000531430 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
NEDD8-206ENST00000531430 DUOX1Q9NRD9 1551 aa11.96□□□□□ -0.5
NEDD8-206ENST00000531430 PDE8AO60658 829 aa11.95□□□□□ -0.5
NEDD8-206ENST00000531430 ATP2B4P23634 1241 aa11.95□□□□□ -0.5
NEDD8-206ENST00000531430 FKBP1BP68106 108 aa11.95□□□□□ -0.5
NEDD8-206ENST00000531430 TRIM28Q13263 835 aaKnown RBP11.95□□□□□ -0.5
NEDD8-206ENST00000531430 RALBP1Q15311 655 aa11.95□□□□□ -0.5
NEDD8-206ENST00000531430 PKN2Q16513 984 aaKnown RBP11.95□□□□□ -0.5
NEDD8-206ENST00000531430 XDHP47989 1333 aa11.94□□□□□ -0.5
NEDD8-206ENST00000531430 WTIPA6NIX2 430 aaPredicted RBP11.94□□□□□ -0.5
NEDD8-206ENST00000531430 GPR25O00155 361 aa11.94□□□□□ -0.5
NEDD8-206ENST00000531430 PRPF38BQ5VTL8 546 aaKnown RBP11.94□□□□□ -0.5
NEDD8-206ENST00000531430 PODNQ7Z5L7 613 aa11.94□□□□□ -0.5
NEDD8-206ENST00000531430 CWC25Q9NXE8 425 aaPredicted RBP11.94□□□□□ -0.5
NEDD8-206ENST00000531430 PCCAP05165 728 aaPredicted RBP11.93□□□□□ -0.5
NEDD8-206ENST00000531430 HOXB7P09629 217 aa11.93□□□□□ -0.5
NEDD8-206ENST00000531430 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
NEDD8-206ENST00000531430 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
NEDD8-206ENST00000531430 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
NEDD8-206ENST00000531430 DDX60Q8IY21 1712 aaKnown RBP11.92□□□□□ -0.5
NEDD8-206ENST00000531430 COL4A1P02462 1669 aa11.92□□□□□ -0.5
NEDD8-206ENST00000531430 SASH1O94885 1247 aa11.92□□□□□ -0.5
NEDD8-206ENST00000531430 DDX58O95786 925 aaKnown RBP11.92□□□□□ -0.5
NEDD8-206ENST00000531430 TM4SF4P48230 202 aa11.92□□□□□ -0.5
NEDD8-206ENST00000531430 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
NEDD8-206ENST00000531430 DDX10Q13206 875 aaKnown RBP11.92□□□□□ -0.5
NEDD8-206ENST00000531430 ARMC9Q7Z3E5 817 aa11.92□□□□□ -0.5
NEDD8-206ENST00000531430 GMLQ99445 158 aa11.92□□□□□ -0.5
NEDD8-206ENST00000531430 CDC5LQ99459 802 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms