RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 DBF4Q9UBU7 674 aaPredicted RBP27.46■■□□□ 1.99
CHKA-206ENST00000531341 RPS12P25398 132 aaKnown RBP27.45■■□□□ 1.98
CHKA-206ENST00000531341 RPS8P62241 208 aaKnown RBP27.45■■□□□ 1.98
CHKA-206ENST00000531341 RALBP1Q15311 655 aa27.45■■□□□ 1.98
CHKA-206ENST00000531341 DCPSQ96C86 337 aaKnown RBP27.45■■□□□ 1.98
CHKA-206ENST00000531341 SEC31BQ9NQW1 1179 aa27.45■■□□□ 1.98
CHKA-206ENST00000531341 C2orf69Q8N8R5 385 aa27.44■■□□□ 1.98
CHKA-206ENST00000531341 EYA3Q99504 573 aa27.44■■□□□ 1.98
CHKA-206ENST00000531341 POLR2AP24928 1970 aaKnown RBP27.43■■□□□ 1.98
CHKA-206ENST00000531341 VIL1P09327 827 aaKnown RBP27.43■■□□□ 1.98
CHKA-206ENST00000531341 ZNF157P51786 506 aaPredicted RBP27.43■■□□□ 1.98
CHKA-206ENST00000531341 KIF4BQ2VIQ3 1234 aa27.43■■□□□ 1.98
CHKA-206ENST00000531341 HOXB7P09629 217 aa27.42■■□□□ 1.98
CHKA-206ENST00000531341 TRIM28Q13263 835 aaKnown RBP27.42■■□□□ 1.98
CHKA-206ENST00000531341 DUSP27Q5VZP5 1158 aa27.42■■□□□ 1.98
CHKA-206ENST00000531341 RUNDC1Q96C34 613 aa27.41■■□□□ 1.98
CHKA-206ENST00000531341 ZC3H12CQ9C0D7 883 aaKnown RBP27.41■■□□□ 1.98
CHKA-206ENST00000531341 HYPKQ9NX55 129 aa27.41■■□□□ 1.98
CHKA-206ENST00000531341 RNF186Q9NXI6 227 aa27.41■■□□□ 1.98
CHKA-206ENST00000531341 GGA3Q9NZ52 723 aa27.41■■□□□ 1.98
CHKA-206ENST00000531341 PODXL2Q9NZ53 605 aa27.41■■□□□ 1.98
CHKA-206ENST00000531341 SCN9AQ15858 1988 aa27.4■■□□□ 1.98
CHKA-206ENST00000531341 TRPA1O75762 1119 aa27.4■■□□□ 1.98
CHKA-206ENST00000531341 CCDC102AQ96A19 550 aa27.4■■□□□ 1.98
CHKA-206ENST00000531341 PHAXQ9H814 394 aaKnown RBP27.4■■□□□ 1.98
CHKA-206ENST00000531341 JARID2Q92833 1246 aaPredicted RBP27.39■■□□□ 1.98
CHKA-206ENST00000531341 CDCA5Q96FF9 252 aa27.39■■□□□ 1.98
CHKA-206ENST00000531341 CSRNP1Q96S65 589 aa27.39■■□□□ 1.98
CHKA-206ENST00000531341 SAGE1Q9NXZ1 904 aa27.39■■□□□ 1.98
CHKA-206ENST00000531341 UFL1O94874 794 aa27.38■■□□□ 1.97
CHKA-206ENST00000531341 SLC10A3P09131 477 aa27.38■■□□□ 1.97
CHKA-206ENST00000531341 RIC3Q7Z5B4 369 aa27.38■■□□□ 1.97
CHKA-206ENST00000531341 ZBTB38Q8NAP3 1195 aaPredicted RBP27.38■■□□□ 1.97
CHKA-206ENST00000531341 MBIPQ9NS73 344 aa27.38■■□□□ 1.97
CHKA-206ENST00000531341 ADAMTS8Q9UP79 889 aa27.38■■□□□ 1.97
CHKA-206ENST00000531341 SULF1Q8IWU6 871 aa27.37■■□□□ 1.97
CHKA-206ENST00000531341 CCDC85AQ96PX6 553 aaPredicted RBP27.37■■□□□ 1.97
CHKA-206ENST00000531341 SCARF1Q14162 830 aa27.36■■□□□ 1.97
CHKA-206ENST00000531341 MYD88Q99836 296 aa27.36■■□□□ 1.97
CHKA-206ENST00000531341 ANKIB1Q9P2G1 1089 aa27.36■■□□□ 1.97
CHKA-206ENST00000531341 SCAF8Q9UPN6 1271 aaKnown RBP27.36■■□□□ 1.97
CHKA-206ENST00000531341 WTIPA6NIX2 430 aaPredicted RBP27.35■■□□□ 1.97
CHKA-206ENST00000531341 ZNF280AP59817 542 aaPredicted RBP27.35■■□□□ 1.97
CHKA-206ENST00000531341 ANGEL2Q5VTE6 544 aaKnown RBP27.35■■□□□ 1.97
CHKA-206ENST00000531341 GGA1Q9UJY5 639 aa27.35■■□□□ 1.97
CHKA-206ENST00000531341 MYBBP1AQ9BQG0 1328 aaKnown RBP27.35■■□□□ 1.97
CHKA-206ENST00000531341 RSBN1LQ6PCB5 846 aaPredicted RBP27.34■■□□□ 1.97
CHKA-206ENST00000531341 G3V3G9 751 aa27.33■■□□□ 1.97
CHKA-206ENST00000531341 ELL2O00472 640 aaPredicted RBP27.33■■□□□ 1.97
CHKA-206ENST00000531341 ZNF853P0CG23 659 aa27.33■■□□□ 1.97
CHKA-206ENST00000531341 DCAF8Q5TAQ9 597 aa27.33■■□□□ 1.97
CHKA-206ENST00000531341 GMLQ99445 158 aa27.33■■□□□ 1.97
CHKA-206ENST00000531341 SOX10P56693 466 aa27.32■■□□□ 1.96
CHKA-206ENST00000531341 WDR43Q15061 677 aaKnown RBP eCLIP27.32■■□□□ 1.96
CHKA-206ENST00000531341 MOB2Q70IA6 237 aa27.32■■□□□ 1.96
CHKA-206ENST00000531341 RASAL3Q86YV0 1011 aa27.32■■□□□ 1.96
CHKA-206ENST00000531341 GOLGA2Q08379 1002 aa27.31■■□□□ 1.96
CHKA-206ENST00000531341 DDX10Q13206 875 aaKnown RBP27.31■■□□□ 1.96
CHKA-206ENST00000531341 AGBL3Q8NEM8 1001 aa27.31■■□□□ 1.96
CHKA-206ENST00000531341 PCCAP05165 728 aaPredicted RBP27.3■■□□□ 1.96
CHKA-206ENST00000531341 MYOZ2Q9NPC6 264 aa27.3■■□□□ 1.96
CHKA-206ENST00000531341 PDE8AO60658 829 aa27.29■■□□□ 1.96
CHKA-206ENST00000531341 CCDC152Q4G0S7 254 aa27.29■■□□□ 1.96
CHKA-206ENST00000531341 CCDC191Q8NCU4 936 aa27.29■■□□□ 1.96
CHKA-206ENST00000531341 ZNF609O15014 1411 aa27.28■■□□□ 1.96
CHKA-206ENST00000531341 PRAMEF18Q5VWM3 479 aa27.28■■□□□ 1.96
CHKA-206ENST00000531341 USP17L8P0C7I0 530 aa27.27■■□□□ 1.96
CHKA-206ENST00000531341 MXD3Q9BW11 206 aa27.27■■□□□ 1.96
CHKA-206ENST00000531341 XDHP47989 1333 aa27.26■■□□□ 1.95
CHKA-206ENST00000531341 C8orf58Q8NAV2 365 aa27.26■■□□□ 1.95
CHKA-206ENST00000531341 CWC25Q9NXE8 425 aaPredicted RBP27.26■■□□□ 1.95
CHKA-206ENST00000531341 USP17L3A6NCW0 530 aa27.25■■□□□ 1.95
CHKA-206ENST00000531341 USP17L4A6NCW7 530 aa27.25■■□□□ 1.95
CHKA-206ENST00000531341 NBPF9Q3BBW0 867 aa27.25■■□□□ 1.95
CHKA-206ENST00000531341 USP17L1Q7RTZ2 530 aa27.25■■□□□ 1.95
CHKA-206ENST00000531341 CTU1Q7Z7A3 348 aaKnown RBP27.25■■□□□ 1.95
CHKA-206ENST00000531341 ANKRD18AQ8IVF6 992 aa27.25■■□□□ 1.95
CHKA-206ENST00000531341 UBE2Q2LH0YL09 131 aa27.24■■□□□ 1.95
CHKA-206ENST00000531341 ATP2B4P23634 1241 aa27.24■■□□□ 1.95
CHKA-206ENST00000531341 METTL22Q9BUU2 404 aaPredicted RBP27.24■■□□□ 1.95
CHKA-206ENST00000531341 HSP90B1P14625 803 aaKnown RBP27.23■■□□□ 1.95
CHKA-206ENST00000531341 PODNQ7Z5L7 613 aa27.23■■□□□ 1.95
CHKA-206ENST00000531341 IFT57Q9NWB7 429 aa27.23■■□□□ 1.95
CHKA-206ENST00000531341 AKAP11Q9UKA4 1901 aa27.23■■□□□ 1.95
CHKA-206ENST00000531341 PITPNM2Q9BZ72 1349 aa27.22■■□□□ 1.95
CHKA-206ENST00000531341 APAF1O14727 1248 aa27.22■■□□□ 1.95
CHKA-206ENST00000531341 FKBP1BP68106 108 aa27.22■■□□□ 1.95
CHKA-206ENST00000531341 PSME4Q14997 1843 aa27.21■■□□□ 1.95
CHKA-206ENST00000531341 TBC1D8O95759 1140 aa27.21■■□□□ 1.95
CHKA-206ENST00000531341 PAPPA2Q9BXP8 1791 aa27.2■■□□□ 1.95
CHKA-206ENST00000531341 IGKV5-2P06315 115 aa27.2■■□□□ 1.94
CHKA-206ENST00000531341 DACT2Q5SW24 774 aa27.2■■□□□ 1.94
CHKA-206ENST00000531341 REM2Q8IYK8 340 aaPredicted RBP27.2■■□□□ 1.94
CHKA-206ENST00000531341 MINPP1Q9UNW1 487 aa27.2■■□□□ 1.94
CHKA-206ENST00000531341 MAP3K2Q9Y2U5 619 aa27.2■■□□□ 1.94
CHKA-206ENST00000531341 CTSWP56202 376 aa27.19■■□□□ 1.94
CHKA-206ENST00000531341 GNAI1P63096 354 aa27.19■■□□□ 1.94
CHKA-206ENST00000531341 TSPYL6Q8N831 410 aa27.19■■□□□ 1.94
CHKA-206ENST00000531341 TTLL11Q8NHH1 800 aa27.19■■□□□ 1.94
CHKA-206ENST00000531341 GREM2Q9H772 168 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms