RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 YTHDC1Q96MU7 727 aaKnown RBP21.65■■□□□ 1.06
LMX1B-203ENST00000526117 EYA3Q99504 573 aa21.65■■□□□ 1.06
LMX1B-203ENST00000526117 KDM2BQ8NHM5 1336 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 GLTPD2A6NH11 291 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 RLBP1P12271 317 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 JDP2Q8WYK2 163 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 ANKRD2Q9GZV1 360 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 POLLQ9UGP5 575 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 GGA1Q9UJY5 639 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 CHMP3Q9Y3E7 222 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 A0A1B0GUL6 1792 aa21.64■■□□□ 1.05
LMX1B-203ENST00000526117 PPIP5K2O43314 1243 aa21.63■■□□□ 1.05
LMX1B-203ENST00000526117 ATP2B4P23634 1241 aa21.63■■□□□ 1.05
LMX1B-203ENST00000526117 MTX1Q13505 466 aa21.63■■□□□ 1.05
LMX1B-203ENST00000526117 LARGE2Q8N3Y3 721 aa21.63■■□□□ 1.05
LMX1B-203ENST00000526117 ANKIB1Q9P2G1 1089 aa21.63■■□□□ 1.05
LMX1B-203ENST00000526117 WDR90Q96KV7 1748 aa21.63■■□□□ 1.05
LMX1B-203ENST00000526117 AOC3Q16853 763 aa21.62■■□□□ 1.05
LMX1B-203ENST00000526117 DPY19L2Q6NUT2 758 aa21.62■■□□□ 1.05
LMX1B-203ENST00000526117 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.62■■□□□ 1.05
LMX1B-203ENST00000526117 LEMD3Q9Y2U8 911 aa21.62■■□□□ 1.05
LMX1B-203ENST00000526117 LRRFIP2Q9Y608 721 aaKnown RBP21.62■■□□□ 1.05
LMX1B-203ENST00000526117 WASHC4Q2M389 1173 aa21.61■■□□□ 1.05
LMX1B-203ENST00000526117 TAF7LQ5H9L4 462 aa21.61■■□□□ 1.05
LMX1B-203ENST00000526117 LDHAL6AQ6ZMR3 332 aa21.61■■□□□ 1.05
LMX1B-203ENST00000526117 NIM1KQ8IY84 436 aa21.61■■□□□ 1.05
LMX1B-203ENST00000526117 FBXO3Q9UK99 471 aa21.61■■□□□ 1.05
LMX1B-203ENST00000526117 MED23Q9ULK4 1368 aa21.61■■□□□ 1.05
LMX1B-203ENST00000526117 C6orf229H3BNL8 230 aa21.6■■□□□ 1.05
LMX1B-203ENST00000526117 UFL1O94874 794 aa21.6■■□□□ 1.05
LMX1B-203ENST00000526117 GNAI2P04899 355 aa21.6■■□□□ 1.05
LMX1B-203ENST00000526117 RFX5P48382 616 aaPredicted RBP21.6■■□□□ 1.05
LMX1B-203ENST00000526117 CHRNDQ07001 517 aa21.6■■□□□ 1.05
LMX1B-203ENST00000526117 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
LMX1B-203ENST00000526117 GPBP1L1Q9HC44 474 aaPredicted RBP21.6■■□□□ 1.05
LMX1B-203ENST00000526117 ZBTB7BO15156 539 aaPredicted RBP21.59■■□□□ 1.05
LMX1B-203ENST00000526117 L3MBTL3Q96JM7 780 aaPredicted RBP21.59■■□□□ 1.05
LMX1B-203ENST00000526117 ZNRF3Q9ULT6 936 aa21.59■■□□□ 1.05
LMX1B-203ENST00000526117 RIPOR2Q9Y4F9 1068 aa21.59■■□□□ 1.05
LMX1B-203ENST00000526117 C15orf52Q6ZUT6 534 aaKnown RBP21.58■■□□□ 1.05
LMX1B-203ENST00000526117 ITPRIPQ8IWB1 547 aa21.58■■□□□ 1.05
LMX1B-203ENST00000526117 ZNF594Q96JF6 807 aaPredicted RBP21.58■■□□□ 1.05
LMX1B-203ENST00000526117 ZC3H12CQ9C0D7 883 aaKnown RBP21.58■■□□□ 1.05
LMX1B-203ENST00000526117 MROH5Q6ZUA9 1318 aa21.57■■□□□ 1.04
LMX1B-203ENST00000526117 EIF6P56537 245 aaKnown RBP21.57■■□□□ 1.04
LMX1B-203ENST00000526117 PTPN12Q05209 780 aaKnown RBP21.57■■□□□ 1.04
LMX1B-203ENST00000526117 GPC2Q8N158 579 aa21.57■■□□□ 1.04
LMX1B-203ENST00000526117 CNNM1Q9NRU3 951 aa21.57■■□□□ 1.04
LMX1B-203ENST00000526117 ZNF804BA4D1E1 1349 aa21.56■■□□□ 1.04
LMX1B-203ENST00000526117 ZNF541Q9H0D2 1346 aa21.56■■□□□ 1.04
LMX1B-203ENST00000526117 MVPQ14764 893 aaKnown RBP21.56■■□□□ 1.04
LMX1B-203ENST00000526117 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
LMX1B-203ENST00000526117 IRS2Q9Y4H2 1338 aa21.55■■□□□ 1.04
LMX1B-203ENST00000526117 CIAO1O76071 339 aa21.55■■□□□ 1.04
LMX1B-203ENST00000526117 CHMP4BQ9H444 224 aaKnown RBP21.55■■□□□ 1.04
LMX1B-203ENST00000526117 COPRSQ9NQ92 184 aa21.55■■□□□ 1.04
LMX1B-203ENST00000526117 DDX19BQ9UMR2 479 aa21.55■■□□□ 1.04
LMX1B-203ENST00000526117 ZNF609O15014 1411 aa21.55■■□□□ 1.04
LMX1B-203ENST00000526117 SCN4AP35499 1836 aa21.54■■□□□ 1.04
LMX1B-203ENST00000526117 YDJCA8MPS7 323 aa21.53■■□□□ 1.04
LMX1B-203ENST00000526117 KIF3CO14782 793 aa21.53■■□□□ 1.04
LMX1B-203ENST00000526117 PLIN1O60240 522 aa21.53■■□□□ 1.04
LMX1B-203ENST00000526117 UBE4AQ14139 1066 aa21.53■■□□□ 1.04
LMX1B-203ENST00000526117 VGLL2Q8N8G2 317 aa21.53■■□□□ 1.04
LMX1B-203ENST00000526117 ZNF526Q8TF50 670 aaPredicted RBP21.53■■□□□ 1.04
LMX1B-203ENST00000526117 PUS3Q9BZE2 481 aaKnown RBP21.53■■□□□ 1.04
LMX1B-203ENST00000526117 PSME4Q14997 1843 aa21.52■■□□□ 1.04
LMX1B-203ENST00000526117 EYA2O00167 538 aa21.52■■□□□ 1.04
LMX1B-203ENST00000526117 ECE2O60344 883 aa21.52■■□□□ 1.04
LMX1B-203ENST00000526117 DDNO94850 711 aaPredicted RBP21.52■■□□□ 1.04
LMX1B-203ENST00000526117 VEGFAP15692 232 aaPredicted RBP21.52■■□□□ 1.04
LMX1B-203ENST00000526117 CXCL9Q07325 125 aa21.52■■□□□ 1.04
LMX1B-203ENST00000526117 TNIP1Q15025 636 aa21.52■■□□□ 1.04
LMX1B-203ENST00000526117 PODNQ7Z5L7 613 aa21.52■■□□□ 1.04
LMX1B-203ENST00000526117 IQCA1LA6NCM1 817 aa21.51■■□□□ 1.03
LMX1B-203ENST00000526117 POTECB2RU33 542 aa21.51■■□□□ 1.03
LMX1B-203ENST00000526117 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
LMX1B-203ENST00000526117 SRGAP3O43295 1099 aa21.51■■□□□ 1.03
LMX1B-203ENST00000526117 LRRC24Q50LG9 513 aa21.51■■□□□ 1.03
LMX1B-203ENST00000526117 CIAPIN1Q6FI81 312 aa21.51■■□□□ 1.03
LMX1B-203ENST00000526117 GPR101Q96P66 508 aaPredicted RBP21.51■■□□□ 1.03
LMX1B-203ENST00000526117 COA1Q9GZY4 146 aa21.51■■□□□ 1.03
LMX1B-203ENST00000526117 NMRK2Q9NPI5 230 aa21.51■■□□□ 1.03
LMX1B-203ENST00000526117 WTIPA6NIX2 430 aaPredicted RBP21.5■■□□□ 1.03
LMX1B-203ENST00000526117 TAF5LO75529 589 aa21.5■■□□□ 1.03
LMX1B-203ENST00000526117 PDE8BO95263 885 aa21.5■■□□□ 1.03
LMX1B-203ENST00000526117 KCNJ4P48050 445 aa21.5■■□□□ 1.03
LMX1B-203ENST00000526117 POLA2Q14181 598 aa21.5■■□□□ 1.03
LMX1B-203ENST00000526117 ATG9AQ7Z3C6 839 aa21.5■■□□□ 1.03
LMX1B-203ENST00000526117 KLHDC4Q8TBB5 520 aa21.5■■□□□ 1.03
LMX1B-203ENST00000526117 DBNDD1Q9H9R9 158 aa21.5■■□□□ 1.03
LMX1B-203ENST00000526117 IL15P40933 162 aaPredicted RBP21.49■■□□□ 1.03
LMX1B-203ENST00000526117 RRP1P56182 461 aaKnown RBP21.49■■□□□ 1.03
LMX1B-203ENST00000526117 METTL24Q5JXM2 366 aa21.49■■□□□ 1.03
LMX1B-203ENST00000526117 HELBQ8NG08 1087 aaPredicted RBP21.49■■□□□ 1.03
LMX1B-203ENST00000526117 SSH3Q8TE77 659 aa21.49■■□□□ 1.03
LMX1B-203ENST00000526117 ZBTB40Q9NUA8 1239 aa21.49■■□□□ 1.03
LMX1B-203ENST00000526117 ATP8B2P98198 1209 aa21.48■■□□□ 1.03
LMX1B-203ENST00000526117 C20orf194Q5TEA3 1177 aa21.48■■□□□ 1.03
LMX1B-203ENST00000526117 TXNRD3Q86VQ6 643 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms