RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 BABAM1Q9NWV8 329 aa15.48■□□□□ 0.07
CAPN1-202ENST00000524773 GRM8O00222 908 aa15.47■□□□□ 0.07
CAPN1-202ENST00000524773 KIF20AO95235 890 aa15.47■□□□□ 0.07
CAPN1-202ENST00000524773 LMOD2Q6P5Q4 547 aa15.47■□□□□ 0.07
CAPN1-202ENST00000524773 A0A1B0GVL5 298 aa15.47■□□□□ 0.07
CAPN1-202ENST00000524773 SLFN14P0C7P3 912 aa15.47■□□□□ 0.07
CAPN1-202ENST00000524773 ME1P48163 572 aa15.47■□□□□ 0.07
CAPN1-202ENST00000524773 RBM43Q6ZSC3 357 aaKnown RBP15.47■□□□□ 0.07
CAPN1-202ENST00000524773 DHX40Q8IX18 779 aaKnown RBP15.47■□□□□ 0.07
CAPN1-202ENST00000524773 DBF4Q9UBU7 674 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-202ENST00000524773 CCZ1BP86790 482 aa15.46■□□□□ 0.07
CAPN1-202ENST00000524773 CCZ1P86791 482 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-202ENST00000524773 GOLGA8FQ08AF8 430 aa15.46■□□□□ 0.07
CAPN1-202ENST00000524773 GOLGA8DPQ0D2H9 430 aa15.46■□□□□ 0.07
CAPN1-202ENST00000524773 KSR2Q6VAB6 950 aa15.46■□□□□ 0.07
CAPN1-202ENST00000524773 FEZ1Q99689 392 aa15.46■□□□□ 0.07
CAPN1-202ENST00000524773 DBNLQ9UJU6 430 aaKnown RBP15.46■□□□□ 0.07
CAPN1-202ENST00000524773 ADD1P35611 737 aaKnown RBP15.45■□□□□ 0.06
CAPN1-202ENST00000524773 ERCC6LQ2NKX8 1250 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 FSIP1Q8NA03 581 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 TMX1Q9H3N1 280 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 PAXBP1Q9Y5B6 917 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 PXDNLA1KZ92 1463 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 CTDNEP1O95476 244 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 IGKV5-2P06315 115 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 TFCP2Q12800 502 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 SNW1Q13573 536 aaKnown RBP15.45■□□□□ 0.06
CAPN1-202ENST00000524773 RIC3Q7Z5B4 369 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 FMN2Q9NZ56 1722 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 ERBB3P21860 1342 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 GIGYF1O75420 1035 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-202ENST00000524773 RBM6P78332 1123 aaKnown RBP15.45■□□□□ 0.06
CAPN1-202ENST00000524773 MTX1Q13505 466 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 ANKRD1Q15327 319 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 ANKARQ7Z5J8 1434 aa15.45■□□□□ 0.06
CAPN1-202ENST00000524773 NWD1Q149M9 1564 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 SMC2O95347 1197 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 POLR3DP05423 398 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-202ENST00000524773 ERC1Q8IUD2 1116 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 ZNF446Q9NWS9 450 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 ATP5J2-PTCD1G3V325 749 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 PTCD1O75127 700 aaKnown RBP15.44■□□□□ 0.06
CAPN1-202ENST00000524773 SYT10Q6XYQ8 523 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 MYD88Q99836 296 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 EPC1Q9H2F5 836 aa15.44■□□□□ 0.06
CAPN1-202ENST00000524773 PTPDC1A2A3K4 754 aa15.43■□□□□ 0.06
CAPN1-202ENST00000524773 HSP90AA4PQ58FG1 418 aa15.43■□□□□ 0.06
CAPN1-202ENST00000524773 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
CAPN1-202ENST00000524773 VGLL3A8MV65 326 aa15.43■□□□□ 0.06
CAPN1-202ENST00000524773 KINO60870 393 aaKnown RBP15.43■□□□□ 0.06
CAPN1-202ENST00000524773 DPCR1Q3MIW9 517 aa15.43■□□□□ 0.06
CAPN1-202ENST00000524773 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-202ENST00000524773 NBPF11Q86T75 865 aa15.43■□□□□ 0.06
CAPN1-202ENST00000524773 CCAR2Q8N163 923 aaKnown RBP15.43■□□□□ 0.06
CAPN1-202ENST00000524773 SDF4Q9BRK5 362 aa15.43■□□□□ 0.06
CAPN1-202ENST00000524773 STX1AQ16623 288 aa15.42■□□□□ 0.06
CAPN1-202ENST00000524773 NYAP1Q6ZVC0 841 aa15.42■□□□□ 0.06
CAPN1-202ENST00000524773 FAM177A1Q8N128 213 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-202ENST00000524773 CEMIPQ8WUJ3 1361 aa15.42■□□□□ 0.06
CAPN1-202ENST00000524773 TTLL5Q6EMB2 1281 aa15.42■□□□□ 0.06
CAPN1-202ENST00000524773 CCDC73Q6ZRK6 1079 aa15.42■□□□□ 0.06
CAPN1-202ENST00000524773 TMC6Q7Z403 805 aa15.42■□□□□ 0.06
CAPN1-202ENST00000524773 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-202ENST00000524773 NSUN7Q8NE18 718 aaKnown RBP15.42■□□□□ 0.06
CAPN1-202ENST00000524773 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
CAPN1-202ENST00000524773 IFNKQ9P0W0 207 aa15.42■□□□□ 0.06
CAPN1-202ENST00000524773 MORC2Q9Y6X9 1032 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-202ENST00000524773 TERF2Q15554 542 aa15.41■□□□□ 0.06
CAPN1-202ENST00000524773 HSP90AB3PQ58FF7 597 aa15.41■□□□□ 0.06
CAPN1-202ENST00000524773 KLHL34Q8N239 644 aa15.41■□□□□ 0.06
CAPN1-202ENST00000524773 ZNF609O15014 1411 aa15.41■□□□□ 0.06
CAPN1-202ENST00000524773 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
CAPN1-202ENST00000524773 TULP1O00294 542 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-202ENST00000524773 NDUFA8P51970 172 aa15.41■□□□□ 0.06
CAPN1-202ENST00000524773 E4F1Q66K89 784 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-202ENST00000524773 NEUROD6Q96NK8 337 aa15.41■□□□□ 0.06
CAPN1-202ENST00000524773 XPO4Q9C0E2 1151 aaKnown RBP15.41■□□□□ 0.06
CAPN1-202ENST00000524773 CFAP45Q9UL16 551 aa15.41■□□□□ 0.06
CAPN1-202ENST00000524773 LRRC37A3O60309 1634 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 RNMTO43148 476 aaKnown RBP15.4■□□□□ 0.06
CAPN1-202ENST00000524773 HAND2P61296 217 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 KRT222Q8N1A0 295 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 ZNF397Q8NF99 534 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-202ENST00000524773 HIP1O00291 1037 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 GOLIM4O00461 696 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 ARMCX5Q6P1M9 558 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 UBE3BQ7Z3V4 1068 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 LINS1Q8NG48 757 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 XAGE3Q8WTP9 111 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 PCDHA7Q9UN72 937 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 CLIC4Q9Y696 253 aa15.4■□□□□ 0.06
CAPN1-202ENST00000524773 ALDH1L1O75891 902 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 LMOD1P29536 600 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-202ENST00000524773 COPS6Q7L5N1 327 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 MRFAP1L1Q96HT8 127 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 PHF8Q9UPP1 1060 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 CACNA1FO60840 1977 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 C1orf141Q5JVX7 400 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 STK11IPQ8N1F8 1099 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms