RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 CDCA5Q96FF9 252 aa12.39□□□□□ -0.43
VIRMA-208ENST00000523263 ZC3H12CQ9C0D7 883 aaKnown RBP12.39□□□□□ -0.43
VIRMA-208ENST00000523263 KCNQ5Q9NR82 932 aa12.39□□□□□ -0.43
VIRMA-208ENST00000523263 LRRC37AA6NMS7 1700 aa12.39□□□□□ -0.43
VIRMA-208ENST00000523263 PITPNM2Q9BZ72 1349 aa12.38□□□□□ -0.43
VIRMA-208ENST00000523263 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
VIRMA-208ENST00000523263 HOXB7P09629 217 aa12.38□□□□□ -0.43
VIRMA-208ENST00000523263 RIPK4P57078 832 aa12.38□□□□□ -0.43
VIRMA-208ENST00000523263 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
VIRMA-208ENST00000523263 LMOD3Q0VAK6 560 aa12.38□□□□□ -0.43
VIRMA-208ENST00000523263 RBM26Q5T8P6 1007 aaKnown RBP12.38□□□□□ -0.43
VIRMA-208ENST00000523263 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
VIRMA-208ENST00000523263 GGA3Q9NZ52 723 aa12.38□□□□□ -0.43
VIRMA-208ENST00000523263 HPS5Q9UPZ3 1129 aa12.38□□□□□ -0.43
VIRMA-208ENST00000523263 CHL1O00533 1208 aa12.37□□□□□ -0.43
VIRMA-208ENST00000523263 HSP90B1P14625 803 aaKnown RBP12.37□□□□□ -0.43
VIRMA-208ENST00000523263 TM4SF4P48230 202 aa12.37□□□□□ -0.43
VIRMA-208ENST00000523263 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
VIRMA-208ENST00000523263 GMLQ99445 158 aa12.37□□□□□ -0.43
VIRMA-208ENST00000523263 CFHR5Q9BXR6 569 aa12.37□□□□□ -0.43
VIRMA-208ENST00000523263 SCARF1Q14162 830 aa12.36□□□□□ -0.43
VIRMA-208ENST00000523263 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
VIRMA-208ENST00000523263 FAM89AQ96GI7 184 aa12.36□□□□□ -0.43
VIRMA-208ENST00000523263 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
VIRMA-208ENST00000523263 MMP14P50281 582 aa12.35□□□□□ -0.43
VIRMA-208ENST00000523263 ANGEL2Q5VTE6 544 aaKnown RBP12.35□□□□□ -0.43
VIRMA-208ENST00000523263 PODNQ7Z5L7 613 aa12.35□□□□□ -0.43
VIRMA-208ENST00000523263 ZNF296Q8WUU4 475 aaPredicted RBP12.35□□□□□ -0.43
VIRMA-208ENST00000523263 GCC1Q96CN9 775 aa12.35□□□□□ -0.43
VIRMA-208ENST00000523263 DBF4Q9UBU7 674 aaPredicted RBP12.35□□□□□ -0.43
VIRMA-208ENST00000523263 HDAC9Q9UKV0 1011 aa12.35□□□□□ -0.43
VIRMA-208ENST00000523263 LAMB2P55268 1798 aa12.35□□□□□ -0.43
VIRMA-208ENST00000523263 ASTN2O75129 1339 aaPredicted RBP12.35□□□□□ -0.43
VIRMA-208ENST00000523263 IRS4O14654 1257 aaPredicted RBP12.34□□□□□ -0.43
VIRMA-208ENST00000523263 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
VIRMA-208ENST00000523263 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
VIRMA-208ENST00000523263 CHPF2Q9P2E5 772 aa12.34□□□□□ -0.43
VIRMA-208ENST00000523263 GGA1Q9UJY5 639 aa12.34□□□□□ -0.43
VIRMA-208ENST00000523263 DLG5Q8TDM6 1919 aa12.34□□□□□ -0.43
VIRMA-208ENST00000523263 PDE4DIPQ5VU43 2346 aa12.33□□□□□ -0.44
VIRMA-208ENST00000523263 G3V3G9 751 aa12.33□□□□□ -0.44
VIRMA-208ENST00000523263 GPR25O00155 361 aa12.33□□□□□ -0.44
VIRMA-208ENST00000523263 USP17L8P0C7I0 530 aa12.33□□□□□ -0.44
VIRMA-208ENST00000523263 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
VIRMA-208ENST00000523263 ZBTB38Q8NAP3 1195 aaPredicted RBP12.33□□□□□ -0.44
VIRMA-208ENST00000523263 HYPKQ9NX55 129 aa12.33□□□□□ -0.44
VIRMA-208ENST00000523263 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
VIRMA-208ENST00000523263 UFL1O94874 794 aa12.32□□□□□ -0.44
VIRMA-208ENST00000523263 HDGFL1Q5TGJ6 251 aa12.32□□□□□ -0.44
VIRMA-208ENST00000523263 ANKIB1Q9P2G1 1089 aa12.32□□□□□ -0.44
VIRMA-208ENST00000523263 PAPPA2Q9BXP8 1791 aa12.32□□□□□ -0.44
VIRMA-208ENST00000523263 TNRC18O15417 2968 aaPredicted RBP12.31□□□□□ -0.44
VIRMA-208ENST00000523263 USP17L3A6NCW0 530 aa12.31□□□□□ -0.44
VIRMA-208ENST00000523263 USP17L4A6NCW7 530 aa12.31□□□□□ -0.44
VIRMA-208ENST00000523263 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
VIRMA-208ENST00000523263 ATP2B4P23634 1241 aa12.31□□□□□ -0.44
VIRMA-208ENST00000523263 SREBF2Q12772 1141 aa12.31□□□□□ -0.44
VIRMA-208ENST00000523263 CCDC152Q4G0S7 254 aa12.31□□□□□ -0.44
VIRMA-208ENST00000523263 USP17L1Q7RTZ2 530 aa12.31□□□□□ -0.44
VIRMA-208ENST00000523263 XDHP47989 1333 aa12.31□□□□□ -0.44
VIRMA-208ENST00000523263 DDX60Q8IY21 1712 aaKnown RBP12.31□□□□□ -0.44
VIRMA-208ENST00000523263 UBE2Q2LH0YL09 131 aa12.3□□□□□ -0.44
VIRMA-208ENST00000523263 ALDH1A1P00352 501 aa12.3□□□□□ -0.44
VIRMA-208ENST00000523263 KRT24Q2M2I5 525 aa12.3□□□□□ -0.44
VIRMA-208ENST00000523263 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
VIRMA-208ENST00000523263 SEC31BQ9NQW1 1179 aa12.3□□□□□ -0.44
VIRMA-208ENST00000523263 PDE8AO60658 829 aa12.29□□□□□ -0.44
VIRMA-208ENST00000523263 FKTNO75072 461 aa12.29□□□□□ -0.44
VIRMA-208ENST00000523263 PCCAP05165 728 aaPredicted RBP12.29□□□□□ -0.44
VIRMA-208ENST00000523263 NF2P35240 595 aa12.29□□□□□ -0.44
VIRMA-208ENST00000523263 INHBEP58166 350 aa12.29□□□□□ -0.44
VIRMA-208ENST00000523263 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
VIRMA-208ENST00000523263 MYO3BQ8WXR4 1341 aa12.29□□□□□ -0.44
VIRMA-208ENST00000523263 AKAP11Q9UKA4 1901 aa12.29□□□□□ -0.44
VIRMA-208ENST00000523263 COL4A1P02462 1669 aa12.29□□□□□ -0.44
VIRMA-208ENST00000523263 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
VIRMA-208ENST00000523263 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
VIRMA-208ENST00000523263 LDLRAD1Q5T700 205 aa12.28□□□□□ -0.44
VIRMA-208ENST00000523263 MOB2Q70IA6 237 aa12.28□□□□□ -0.44
VIRMA-208ENST00000523263 ANKRD18AQ8IVF6 992 aa12.28□□□□□ -0.44
VIRMA-208ENST00000523263 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
VIRMA-208ENST00000523263 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
VIRMA-208ENST00000523263 TAF1P21675 1872 aa12.27□□□□□ -0.44
VIRMA-208ENST00000523263 UNCXA6NJT0 531 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 WNT10BO00744 389 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 RALBP1Q15311 655 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 DACT2Q5SW24 774 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 STRIP1Q5VSL9 837 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 DUSP27Q5VZP5 1158 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 ARMC9Q7Z3E5 817 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 RIC3Q7Z5B4 369 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 ZNF428Q96B54 188 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 MED23Q9ULK4 1368 aa12.27□□□□□ -0.45
VIRMA-208ENST00000523263 POLR2AP24928 1970 aaKnown RBP12.27□□□□□ -0.45
VIRMA-208ENST00000523263 PTPN12Q05209 780 aaKnown RBP12.26□□□□□ -0.45
VIRMA-208ENST00000523263 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
VIRMA-208ENST00000523263 MAP3K11Q16584 847 aa12.26□□□□□ -0.45
VIRMA-208ENST00000523263 HABP4Q5JVS0 413 aaKnown RBP12.26□□□□□ -0.45
VIRMA-208ENST00000523263 SPRYD7Q5W111 196 aa12.26□□□□□ -0.45
VIRMA-208ENST00000523263 CDC5LQ99459 802 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms