RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TFIP11Q9UBB9 837 aaKnown RBP18.64■□□□□ 0.57
PCDHA3-201ENST00000522353 TTC6Q86TZ1 520 aa18.64■□□□□ 0.57
PCDHA3-201ENST00000522353 RAB11FIP4Q86YS3 637 aa18.64■□□□□ 0.57
PCDHA3-201ENST00000522353 TTC41PQ6P2S7 1318 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 YTHDC2Q9H6S0 1430 aaKnown RBP18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 HEATR3Q7Z4Q2 680 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 NUCB1Q02818 461 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 PTPN14Q15678 1187 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 LARP6Q9BRS8 491 aaKnown RBP18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 KAT6BQ8WYB5 2073 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 UQCRHLA0A096LP55 91 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 UQCRHP07919 91 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 NAPAP54920 295 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 RBM10P98175 930 aaKnown RBP18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 ALG1Q9BT22 464 aa18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 RBM8AQ9Y5S9 174 aaKnown RBP18.63■□□□□ 0.57
PCDHA3-201ENST00000522353 CTNNA2P26232 953 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 SH2D4AQ9H788 454 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 RIMBP2O15034 1052 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 CALML3P27482 149 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 PAFAH1B1P43034 410 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 EXOC1Q9NV70 894 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 SPDYE3A6NKU9 549 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 CAVIN2O95810 425 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 CCDC172P0C7W6 258 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 HOOK3Q86VS8 718 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 SH3TC1Q8TE82 1336 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 MACROD2A1Z1Q3 448 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 SDSP20132 328 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 PANK2Q9BZ23 570 aa18.62■□□□□ 0.57
PCDHA3-201ENST00000522353 PRC1O43663 620 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 ATP10AO60312 1499 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 ARHGEF10O15013 1369 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 BABAM1Q9NWV8 329 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 RTL9Q8NET4 1388 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 RNF113AO15541 343 aaKnown RBP18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 STX1AQ16623 288 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 HELBQ8NG08 1087 aaPredicted RBP18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 DENND2AQ9ULE3 1009 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 GSTTP1A0A1W2PQM5 241 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 LUZP1Q86V48 1076 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 FERMT1Q9BQL6 677 aa18.61■□□□□ 0.57
PCDHA3-201ENST00000522353 NEMFO60524 1076 aa18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 SSFA2P28290 1259 aa18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 PLS1Q14651 629 aa18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 WWC3Q9ULE0 1092 aa18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 NCBP1Q09161 790 aaKnown RBP18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 CWF19L2Q2TBE0 894 aaKnown RBP18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 KIF4BQ2VIQ3 1234 aa18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 KIF18AQ8NI77 898 aa18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 CCDC102AQ96A19 550 aa18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 RRP36Q96EU6 259 aaKnown RBP18.6■□□□□ 0.57
PCDHA3-201ENST00000522353 FAM193AP78312 1265 aa18.59■□□□□ 0.57
PCDHA3-201ENST00000522353 CTNNBL1Q8WYA6 563 aaPredicted RBP18.59■□□□□ 0.57
PCDHA3-201ENST00000522353 CRACR2AQ9BSW2 395 aa18.59■□□□□ 0.57
PCDHA3-201ENST00000522353 PA2G4Q9UQ80 394 aaKnown RBP18.59■□□□□ 0.57
PCDHA3-201ENST00000522353 PPM1FP49593 454 aaPredicted RBP18.59■□□□□ 0.57
PCDHA3-201ENST00000522353 KCNG4Q8TDN1 519 aa18.59■□□□□ 0.57
PCDHA3-201ENST00000522353 PUF60Q9UHX1 559 aaKnown RBP18.59■□□□□ 0.57
PCDHA3-201ENST00000522353 ZNF790Q6PG37 636 aa18.58■□□□□ 0.57
PCDHA3-201ENST00000522353 TNPO1Q92973 898 aaKnown RBP18.58■□□□□ 0.57
PCDHA3-201ENST00000522353 CLIP2Q9UDT6 1046 aa18.58■□□□□ 0.57
PCDHA3-201ENST00000522353 A0A1W2PP64 1363 aa18.58■□□□□ 0.57
PCDHA3-201ENST00000522353 MCM3P25205 808 aa18.58■□□□□ 0.57
PCDHA3-201ENST00000522353 TRIM47Q96LD4 638 aa18.58■□□□□ 0.57
PCDHA3-201ENST00000522353 EIF2AK4Q9P2K8 1649 aaKnown RBP18.58■□□□□ 0.57
PCDHA3-201ENST00000522353 MAP9Q49MG5 647 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 MAGEB6Q8N7X4 407 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 ALS2CR12Q96Q35 445 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 ESYT1Q9BSJ8 1104 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 KIAA0556O60303 1618 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 BIN1O00499 593 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 PLBD2Q8NHP8 589 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 KRT13P13646 458 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 SYKP43405 635 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 GSDMDP57764 484 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 TMCO3Q6UWJ1 677 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 CPLX3Q8WVH0 158 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
PCDHA3-201ENST00000522353 HOXB7P09629 217 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 STAT6P42226 847 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 SLAIN2Q9P270 581 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 GNA11P29992 359 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 CCDC91Q7Z6B0 441 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 VAMP4O75379 141 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 MAST3O60307 1309 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 TAOK3Q9H2K8 898 aa18.57■□□□□ 0.56
PCDHA3-201ENST00000522353 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
PCDHA3-201ENST00000522353 UFL1O94874 794 aa18.56■□□□□ 0.56
PCDHA3-201ENST00000522353 TCHPQ9BT92 498 aa18.56■□□□□ 0.56
PCDHA3-201ENST00000522353 MIGA1Q8NAN2 632 aa18.56■□□□□ 0.56
PCDHA3-201ENST00000522353 BAG6P46379 1132 aa18.56■□□□□ 0.56
PCDHA3-201ENST00000522353 UBE2HP62256 183 aa18.56■□□□□ 0.56
PCDHA3-201ENST00000522353 TAF3Q5VWG9 929 aa18.56■□□□□ 0.56
PCDHA3-201ENST00000522353 PHACTR2O75167 634 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms