RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SLX4Q8IY92 1834 aa17.5■□□□□ 0.39
SDC2-203ENST00000519587 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
SDC2-203ENST00000519587 EYA2O00167 538 aa17.5■□□□□ 0.39
SDC2-203ENST00000519587 PPEF1O14829 653 aaPredicted RBP17.5■□□□□ 0.39
SDC2-203ENST00000519587 PRPF40BQ6NWY9 871 aaKnown RBP17.5■□□□□ 0.39
SDC2-203ENST00000519587 TTLL6Q8N841 843 aa17.5■□□□□ 0.39
SDC2-203ENST00000519587 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
SDC2-203ENST00000519587 GCC1Q96CN9 775 aa17.5■□□□□ 0.39
SDC2-203ENST00000519587 ZNF594Q96JF6 807 aaPredicted RBP17.5■□□□□ 0.39
SDC2-203ENST00000519587 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
SDC2-203ENST00000519587 PIM2Q9P1W9 311 aa17.5■□□□□ 0.39
SDC2-203ENST00000519587 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
SDC2-203ENST00000519587 PA2G4Q9UQ80 394 aaKnown RBP17.5■□□□□ 0.39
SDC2-203ENST00000519587 NOP58Q9Y2X3 529 aaKnown RBP17.5■□□□□ 0.39
SDC2-203ENST00000519587 ARFGEF1Q9Y6D6 1849 aa17.49■□□□□ 0.39
SDC2-203ENST00000519587 COL4A1P02462 1669 aa17.49■□□□□ 0.39
SDC2-203ENST00000519587 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
SDC2-203ENST00000519587 IL15P40933 162 aaPredicted RBP17.49■□□□□ 0.39
SDC2-203ENST00000519587 KLHDC4Q8TBB5 520 aa17.49■□□□□ 0.39
SDC2-203ENST00000519587 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
SDC2-203ENST00000519587 DCTPP1Q9H773 170 aa17.48■□□□□ 0.39
SDC2-203ENST00000519587 EXOC6BQ9Y2D4 811 aa17.48■□□□□ 0.39
SDC2-203ENST00000519587 DALRD3Q5D0E6 543 aaKnown RBP17.47■□□□□ 0.39
SDC2-203ENST00000519587 METTL24Q5JXM2 366 aa17.47■□□□□ 0.39
SDC2-203ENST00000519587 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
SDC2-203ENST00000519587 CC2D2BQ6DHV5 1058 aa17.47■□□□□ 0.39
SDC2-203ENST00000519587 CENPQQ7L2Z9 268 aaPredicted RBP17.47■□□□□ 0.39
SDC2-203ENST00000519587 ANKRD2Q9GZV1 360 aa17.47■□□□□ 0.39
SDC2-203ENST00000519587 ATP6V0A2Q9Y487 856 aa17.47■□□□□ 0.39
SDC2-203ENST00000519587 GRIPAP1Q4V328 841 aa17.46■□□□□ 0.39
SDC2-203ENST00000519587 ZNF526Q8TF50 670 aaPredicted RBP17.46■□□□□ 0.39
SDC2-203ENST00000519587 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
SDC2-203ENST00000519587 CEP126Q9P2H0 1117 aa17.46■□□□□ 0.39
SDC2-203ENST00000519587 GTF3C3Q9Y5Q9 886 aa17.46■□□□□ 0.39
SDC2-203ENST00000519587 IGHDP01880 384 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 KCNA3P22001 575 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 LRRC24Q50LG9 513 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 SP8Q8IXZ3 490 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 SMC5Q8IY18 1101 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
SDC2-203ENST00000519587 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 RIPOR2Q9Y4F9 1068 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 XDHP47989 1333 aa17.45■□□□□ 0.38
SDC2-203ENST00000519587 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
SDC2-203ENST00000519587 ARAP2Q8WZ64 1704 aa17.44■□□□□ 0.38
SDC2-203ENST00000519587 CHRNDQ07001 517 aa17.44■□□□□ 0.38
SDC2-203ENST00000519587 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
SDC2-203ENST00000519587 ANKIB1Q9P2G1 1089 aa17.44■□□□□ 0.38
SDC2-203ENST00000519587 APBB1O00213 710 aa17.43■□□□□ 0.38
SDC2-203ENST00000519587 KCNJ4P48050 445 aa17.43■□□□□ 0.38
SDC2-203ENST00000519587 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
SDC2-203ENST00000519587 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
SDC2-203ENST00000519587 MINPP1Q9UNW1 487 aa17.43■□□□□ 0.38
SDC2-203ENST00000519587 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
SDC2-203ENST00000519587 KDM2BQ8NHM5 1336 aa17.43■□□□□ 0.38
SDC2-203ENST00000519587 ZNF609O15014 1411 aa17.42■□□□□ 0.38
SDC2-203ENST00000519587 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
SDC2-203ENST00000519587 CLASRPQ8N2M8 674 aaKnown RBP17.42■□□□□ 0.38
SDC2-203ENST00000519587 BCS1LQ9Y276 419 aa17.42■□□□□ 0.38
SDC2-203ENST00000519587 PDE8BO95263 885 aa17.41■□□□□ 0.38
SDC2-203ENST00000519587 TFCP2Q12800 502 aa17.41■□□□□ 0.38
SDC2-203ENST00000519587 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
SDC2-203ENST00000519587 GPR108Q9NPR9 543 aa17.41■□□□□ 0.38
SDC2-203ENST00000519587 FER1L6Q2WGJ9 1857 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 C21orf2O43822 256 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 SASH1O94885 1247 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 SLC5A1P13866 664 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 DPP8Q6V1X1 898 aaPredicted RBP17.4■□□□□ 0.38
SDC2-203ENST00000519587 MPNDQ8N594 471 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
SDC2-203ENST00000519587 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 NSFL1CQ9UNZ2 370 aaKnown RBP17.4■□□□□ 0.38
SDC2-203ENST00000519587 LEMD3Q9Y2U8 911 aa17.4■□□□□ 0.38
SDC2-203ENST00000519587 UFL1O94874 794 aa17.39■□□□□ 0.37
SDC2-203ENST00000519587 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.37
SDC2-203ENST00000519587 ATP2B4P23634 1241 aa17.39■□□□□ 0.37
SDC2-203ENST00000519587 GPSM2P81274 684 aa17.39■□□□□ 0.37
SDC2-203ENST00000519587 UBE4AQ14139 1066 aa17.39■□□□□ 0.37
SDC2-203ENST00000519587 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
SDC2-203ENST00000519587 SUPT20HQ8NEM7 779 aa17.39■□□□□ 0.37
SDC2-203ENST00000519587 HELBQ8NG08 1087 aaPredicted RBP17.39■□□□□ 0.37
SDC2-203ENST00000519587 C7orf43Q8WVR3 580 aa17.39■□□□□ 0.37
SDC2-203ENST00000519587 DUOX1Q9NRD9 1551 aa17.38■□□□□ 0.37
SDC2-203ENST00000519587 NUCB1Q02818 461 aa17.38■□□□□ 0.37
SDC2-203ENST00000519587 LPIN2Q92539 896 aa17.38■□□□□ 0.37
SDC2-203ENST00000519587 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
SDC2-203ENST00000519587 WWC3Q9ULE0 1092 aa17.38■□□□□ 0.37
SDC2-203ENST00000519587 TAF5LO75529 589 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 IFIT2P09913 472 aaKnown RBP17.37■□□□□ 0.37
SDC2-203ENST00000519587 APLP1P51693 650 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 AACSQ86V21 672 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 CHD1LQ86WJ1 897 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 GPATCH3Q96I76 525 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 EYA3Q99504 573 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms