RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 C3P01024 1663 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 ZNF445P59923 1031 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 DACT1Q9NYF0 836 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 USP21Q9UK80 565 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 SSH2Q76I76 1423 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 CPS1P31327 1500 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 SLC5A1P13866 664 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 PHKG2P15735 406 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 EDC3Q96F86 508 aaKnown RBP13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 MCM5P33992 734 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 ZNF165P49910 485 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
PCDHGB4-201ENST00000519479 SERPINC1P01008 464 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 PTH1RQ03431 593 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 TSR1Q2NL82 804 aaKnown RBP13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 CHST3Q7LGC8 479 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 GAS2L3Q86XJ1 694 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 NCOA7Q8NI08 942 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 CARD10Q9BWT7 1032 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 PTPRUQ92729 1446 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 MINDY4BA8MYZ0 360 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 SLC3A2P08195 630 aaKnown RBP13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 MTERF4Q7Z6M4 381 aaKnown RBP13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 RAD21O60216 631 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 TTF1Q15361 905 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 ANO10Q9NW15 660 aa13.15□□□□□ -0.3
PCDHGB4-201ENST00000519479 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.31
PCDHGB4-201ENST00000519479 RPS6KB1P23443 525 aa13.15□□□□□ -0.31
PCDHGB4-201ENST00000519479 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.31
PCDHGB4-201ENST00000519479 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 ZPR1O75312 459 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 ZNF830Q96NB3 372 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 EYA2O00167 538 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 CTAGE5O15320 804 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 APOBRQ0VD83 1088 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 FAM173BQ6P4H8 233 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 FAM89AQ96GI7 184 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 ZMYND15Q9H091 742 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
PCDHGB4-201ENST00000519479 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 WASF1Q92558 559 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 SLC12A7Q9Y666 1083 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 FSD2A1L4K1 749 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 SLC9C2Q5TAH2 1124 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 ZKSCAN5Q9Y2L8 839 aa13.13□□□□□ -0.31
PCDHGB4-201ENST00000519479 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 TM6SF1Q9BZW5 370 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 TRPC5Q9UL62 973 aaPredicted RBP13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 CLIP2Q9UDT6 1046 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 CCDC47Q96A33 483 aaKnown RBP13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 CD163L1Q9NR16 1453 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 MYOM1P52179 1685 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 KIF2CQ99661 725 aa13.12□□□□□ -0.31
PCDHGB4-201ENST00000519479 METAP2P50579 478 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 POLA2Q14181 598 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 CRB1P82279 1406 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 ERBB3P21860 1342 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 ATP5JP18859 108 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 ANO6Q4KMQ2 910 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 CCDC112Q8NEF3 446 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 AK7Q96M32 723 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 PTPDC1A2A3K4 754 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 ME3Q16798 604 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 MNS1Q8NEH6 495 aa13.11□□□□□ -0.31
PCDHGB4-201ENST00000519479 BIN1O00499 593 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 PRC1O43663 620 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 HELBQ8NG08 1087 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 GPT2Q8TD30 523 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 PIBF1Q8WXW3 757 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 ZNF772Q68DY9 489 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 TTC12Q9H892 705 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms