RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 MINPP1Q9UNW1 487 aa28.26■■■□□ 2.11
SKP1-206ENST00000519321 SPEF2Q9C093 1822 aa28.25■■■□□ 2.11
SKP1-206ENST00000519321 GPSM2P81274 684 aa28.25■■■□□ 2.11
SKP1-206ENST00000519321 SLC51AQ86UW1 340 aa28.25■■■□□ 2.11
SKP1-206ENST00000519321 ANKRD2Q9GZV1 360 aa28.25■■■□□ 2.11
SKP1-206ENST00000519321 DDX19BQ9UMR2 479 aa28.25■■■□□ 2.11
SKP1-206ENST00000519321 DICER1Q9UPY3 1922 aaKnown RBP28.25■■■□□ 2.11
SKP1-206ENST00000519321 ZBTB7BO15156 539 aaPredicted RBP28.24■■■□□ 2.11
SKP1-206ENST00000519321 MVPQ14764 893 aaKnown RBP28.24■■■□□ 2.11
SKP1-206ENST00000519321 LDHAL6AQ6ZMR3 332 aa28.24■■■□□ 2.11
SKP1-206ENST00000519321 JDP2Q8WYK2 163 aa28.23■■■□□ 2.11
SKP1-206ENST00000519321 EYA3Q99504 573 aa28.23■■■□□ 2.11
SKP1-206ENST00000519321 CNNM1Q9NRU3 951 aa28.23■■■□□ 2.11
SKP1-206ENST00000519321 GGA1Q9UJY5 639 aa28.23■■■□□ 2.11
SKP1-206ENST00000519321 C6orf229H3BNL8 230 aa28.22■■■□□ 2.11
SKP1-206ENST00000519321 ATP2B4P23634 1241 aa28.22■■■□□ 2.11
SKP1-206ENST00000519321 ZNF594Q96JF6 807 aaPredicted RBP28.22■■■□□ 2.11
SKP1-206ENST00000519321 PPIP5K2O43314 1243 aa28.21■■■□□ 2.11
SKP1-206ENST00000519321 MTX1Q13505 466 aa28.21■■■□□ 2.11
SKP1-206ENST00000519321 LARGE2Q8N3Y3 721 aa28.21■■■□□ 2.11
SKP1-206ENST00000519321 TBC1D16Q8TBP0 767 aa28.21■■■□□ 2.11
SKP1-206ENST00000519321 LTBP1Q14766 1721 aa28.21■■■□□ 2.11
SKP1-206ENST00000519321 RRP1P56182 461 aaKnown RBP28.2■■■□□ 2.1
SKP1-206ENST00000519321 KIAA2012Q0VF49 1180 aa28.2■■■□□ 2.1
SKP1-206ENST00000519321 COG6Q9Y2V7 657 aa28.2■■■□□ 2.1
SKP1-206ENST00000519321 DUOX1Q9NRD9 1551 aa28.2■■■□□ 2.1
SKP1-206ENST00000519321 TIAM2Q8IVF5 1701 aa28.19■■■□□ 2.1
SKP1-206ENST00000519321 UFL1O94874 794 aa28.19■■■□□ 2.1
SKP1-206ENST00000519321 CHRNDQ07001 517 aa28.19■■■□□ 2.1
SKP1-206ENST00000519321 WASHC4Q2M389 1173 aa28.19■■■□□ 2.1
SKP1-206ENST00000519321 POLLQ9UGP5 575 aa28.19■■■□□ 2.1
SKP1-206ENST00000519321 LEMD3Q9Y2U8 911 aa28.19■■■□□ 2.1
SKP1-206ENST00000519321 AOC3Q16853 763 aa28.18■■■□□ 2.1
SKP1-206ENST00000519321 FBXO3Q9UK99 471 aa28.18■■■□□ 2.1
SKP1-206ENST00000519321 RFX5P48382 616 aaPredicted RBP28.17■■■□□ 2.1
SKP1-206ENST00000519321 NIM1KQ8IY84 436 aa28.17■■■□□ 2.1
SKP1-206ENST00000519321 ZC3H12CQ9C0D7 883 aaKnown RBP28.17■■■□□ 2.1
SKP1-206ENST00000519321 MROH5Q6ZUA9 1318 aa28.17■■■□□ 2.1
SKP1-206ENST00000519321 SRGAP3O43295 1099 aa28.16■■■□□ 2.1
SKP1-206ENST00000519321 C20orf194Q5TEA3 1177 aa28.16■■■□□ 2.1
SKP1-206ENST00000519321 DPY19L2Q6NUT2 758 aa28.16■■■□□ 2.1
SKP1-206ENST00000519321 KCNJ4P48050 445 aa28.15■■■□□ 2.1
SKP1-206ENST00000519321 PTPN12Q05209 780 aaKnown RBP28.15■■■□□ 2.1
SKP1-206ENST00000519321 RIPOR2Q9Y4F9 1068 aa28.15■■■□□ 2.1
SKP1-206ENST00000519321 COPRSQ9NQ92 184 aa28.14■■■□□ 2.1
SKP1-206ENST00000519321 ZNF804BA4D1E1 1349 aa28.14■■■□□ 2.09
SKP1-206ENST00000519321 FZD9O00144 591 aa28.13■■■□□ 2.09
SKP1-206ENST00000519321 EYA2O00167 538 aa28.13■■■□□ 2.09
SKP1-206ENST00000519321 KLHDC4Q8TBB5 520 aa28.13■■■□□ 2.09
SKP1-206ENST00000519321 PUS3Q9BZE2 481 aaKnown RBP28.13■■■□□ 2.09
SKP1-206ENST00000519321 KDM2BQ8NHM5 1336 aa28.13■■■□□ 2.09
SKP1-206ENST00000519321 MED23Q9ULK4 1368 aa28.12■■■□□ 2.09
SKP1-206ENST00000519321 RIMBP2O15034 1052 aa28.12■■■□□ 2.09
SKP1-206ENST00000519321 CIAO1O76071 339 aa28.12■■■□□ 2.09
SKP1-206ENST00000519321 EIF6P56537 245 aaKnown RBP28.12■■■□□ 2.09
SKP1-206ENST00000519321 ZNRF3Q9ULT6 936 aa28.12■■■□□ 2.09
SKP1-206ENST00000519321 GLTPD2A6NH11 291 aa28.11■■■□□ 2.09
SKP1-206ENST00000519321 G3V3G9 751 aa28.11■■■□□ 2.09
SKP1-206ENST00000519321 ATP8B2P98198 1209 aa28.11■■■□□ 2.09
SKP1-206ENST00000519321 LRRC24Q50LG9 513 aa28.11■■■□□ 2.09
SKP1-206ENST00000519321 DCAF8Q5TAQ9 597 aa28.11■■■□□ 2.09
SKP1-206ENST00000519321 C1orf115Q9H7X2 142 aa28.11■■■□□ 2.09
SKP1-206ENST00000519321 ZBTB40Q9NUA8 1239 aa28.11■■■□□ 2.09
SKP1-206ENST00000519321 TAF5LO75529 589 aa28.1■■■□□ 2.09
SKP1-206ENST00000519321 METTL24Q5JXM2 366 aa28.1■■■□□ 2.09
SKP1-206ENST00000519321 ZNF784Q8NCA9 323 aaPredicted RBP28.1■■■□□ 2.09
SKP1-206ENST00000519321 HELBQ8NG08 1087 aaPredicted RBP28.1■■■□□ 2.09
SKP1-206ENST00000519321 A0A1B0GUL6 1792 aa28.09■■■□□ 2.09
SKP1-206ENST00000519321 UBE4AQ14139 1066 aa28.09■■■□□ 2.09
SKP1-206ENST00000519321 COL4A5P29400 1685 aa28.09■■■□□ 2.09
SKP1-206ENST00000519321 PNMA6EA0A0J9YXQ4 647 aa28.08■■■□□ 2.09
SKP1-206ENST00000519321 IL15P40933 162 aaPredicted RBP28.08■■■□□ 2.09
SKP1-206ENST00000519321 GPR101Q96P66 508 aaPredicted RBP28.08■■■□□ 2.09
SKP1-206ENST00000519321 SIL1Q9H173 461 aa28.08■■■□□ 2.09
SKP1-206ENST00000519321 GPBP1L1Q9HC44 474 aaPredicted RBP28.08■■■□□ 2.09
SKP1-206ENST00000519321 POLA2Q14181 598 aa28.07■■■□□ 2.08
SKP1-206ENST00000519321 C15orf52Q6ZUT6 534 aaKnown RBP28.07■■■□□ 2.08
SKP1-206ENST00000519321 RPAP2Q8IXW5 612 aaPredicted RBP28.07■■■□□ 2.08
SKP1-206ENST00000519321 SSH3Q8TE77 659 aa28.07■■■□□ 2.08
SKP1-206ENST00000519321 PA2G4Q9UQ80 394 aaKnown RBP28.07■■■□□ 2.08
SKP1-206ENST00000519321 PDE8BO95263 885 aa28.06■■■□□ 2.08
SKP1-206ENST00000519321 CEP85Q6P2H3 762 aa28.06■■■□□ 2.08
SKP1-206ENST00000519321 ECE2O60344 883 aa28.05■■■□□ 2.08
SKP1-206ENST00000519321 ATG9AQ7Z3C6 839 aa28.05■■■□□ 2.08
SKP1-206ENST00000519321 GPC2Q8N158 579 aa28.05■■■□□ 2.08
SKP1-206ENST00000519321 ZNF526Q8TF50 670 aaPredicted RBP28.05■■■□□ 2.08
SKP1-206ENST00000519321 DBNDD1Q9H9R9 158 aa28.05■■■□□ 2.08
SKP1-206ENST00000519321 ZNF541Q9H0D2 1346 aa28.04■■■□□ 2.08
SKP1-206ENST00000519321 DOK7Q18PE1 504 aa28.04■■■□□ 2.08
SKP1-206ENST00000519321 PODNQ7Z5L7 613 aa28.04■■■□□ 2.08
SKP1-206ENST00000519321 VGLL2Q8N8G2 317 aa28.04■■■□□ 2.08
SKP1-206ENST00000519321 COA1Q9GZY4 146 aa28.04■■■□□ 2.08
SKP1-206ENST00000519321 CEP126Q9P2H0 1117 aa28.04■■■□□ 2.08
SKP1-206ENST00000519321 WTIPA6NIX2 430 aaPredicted RBP28.03■■■□□ 2.08
SKP1-206ENST00000519321 G3BP1Q13283 466 aaKnown RBP eCLIP28.03■■■□□ 2.08
SKP1-206ENST00000519321 TNIP1Q15025 636 aa28.03■■■□□ 2.08
SKP1-206ENST00000519321 CIAPIN1Q6FI81 312 aa28.03■■■□□ 2.08
SKP1-206ENST00000519321 HMMRO75330 724 aa28.02■■■□□ 2.08
SKP1-206ENST00000519321 DDNO94850 711 aaPredicted RBP28.02■■■□□ 2.08
SKP1-206ENST00000519321 PUM3Q15397 648 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms