RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 DDX46Q7L014 1031 aaKnown RBP14.2□□□□□ -0.14
ARFGEF1-202ENST00000517955 MASTLQ96GX5 879 aa14.2□□□□□ -0.14
ARFGEF1-202ENST00000517955 RBM17Q96I25 401 aaKnown RBP14.2□□□□□ -0.14
ARFGEF1-202ENST00000517955 LRP5O75197 1615 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 H0YIN7 160 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 RAB11FIP3O75154 756 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 BBOX1O75936 387 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 RPS8P62241 208 aaKnown RBP14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 GRAPQ13588 217 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 CENPQQ7L2Z9 268 aaPredicted RBP14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 TMC4Q7Z404 712 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 GRAPLQ8TC17 118 aaPredicted RBP14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 RPGRQ92834 1020 aaKnown RBP14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 CCDC136Q96JN2 1154 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 SEC31BQ9NQW1 1179 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 BSDC1Q9NW68 430 aaPredicted RBP14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 CHMP3Q9Y3E7 222 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
ARFGEF1-202ENST00000517955 EYA2O00167 538 aa14.18□□□□□ -0.14
ARFGEF1-202ENST00000517955 RIPOR2Q9Y4F9 1068 aa14.18□□□□□ -0.14
ARFGEF1-202ENST00000517955 COL11A2P13942 1736 aaPredicted RBP14.18□□□□□ -0.14
ARFGEF1-202ENST00000517955 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
ARFGEF1-202ENST00000517955 SURF6O75683 361 aaKnown RBP14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 IGHMBP2P38935 993 aaKnown RBP14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 IL15P40933 162 aaPredicted RBP14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 ATG9AQ7Z3C6 839 aa14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 C2CD5Q86YS7 1000 aa14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 ERC1Q8IUD2 1116 aa14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 ANKRD18AQ8IVF6 992 aa14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 CNKSR1Q969H4 720 aa14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 CCDC85AQ96PX6 553 aaPredicted RBP14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 PA2G4Q9UQ80 394 aaKnown RBP14.17□□□□□ -0.14
ARFGEF1-202ENST00000517955 KCNA3P22001 575 aa14.16□□□□□ -0.14
ARFGEF1-202ENST00000517955 G3BP1Q13283 466 aaKnown RBP eCLIP14.16□□□□□ -0.14
ARFGEF1-202ENST00000517955 TAF7LQ5H9L4 462 aa14.16□□□□□ -0.14
ARFGEF1-202ENST00000517955 LDHAL6AQ6ZMR3 332 aa14.16□□□□□ -0.14
ARFGEF1-202ENST00000517955 CELF1Q92879 486 aaKnown RBP14.16□□□□□ -0.14
ARFGEF1-202ENST00000517955 ZNF594Q96JF6 807 aaPredicted RBP14.16□□□□□ -0.14
ARFGEF1-202ENST00000517955 MPHOSPH8Q99549 860 aa14.16□□□□□ -0.14
ARFGEF1-202ENST00000517955 MROH5Q6ZUA9 1318 aa14.15□□□□□ -0.14
ARFGEF1-202ENST00000517955 TAF1P21675 1872 aa14.15□□□□□ -0.14
ARFGEF1-202ENST00000517955 B4GALNT3Q6L9W6 998 aa14.15□□□□□ -0.14
ARFGEF1-202ENST00000517955 KLHDC4Q8TBB5 520 aa14.15□□□□□ -0.14
ARFGEF1-202ENST00000517955 KIF1BPQ96EK5 621 aa14.15□□□□□ -0.14
ARFGEF1-202ENST00000517955 GPR108Q9NPR9 543 aa14.15□□□□□ -0.14
ARFGEF1-202ENST00000517955 COL4A1P02462 1669 aa14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 SASH1O94885 1247 aa14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 CHRNA5P30532 468 aa14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 LRRC24Q50LG9 513 aa14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 SP8Q8IXZ3 490 aa14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 VGLL2Q8N8G2 317 aa14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 PUS3Q9BZE2 481 aaKnown RBP14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 EXOC6BQ9Y2D4 811 aa14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 BRCA1P38398 1863 aaKnown RBP14.14□□□□□ -0.15
ARFGEF1-202ENST00000517955 DPEP1P16444 411 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 NUCB1Q02818 461 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 GRIPAP1Q4V328 841 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 TTLL6Q8N841 843 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 RHPN1Q8TCX5 695 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 C7orf43Q8WVR3 580 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 LRRCC1Q9C099 1032 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 CNNM1Q9NRU3 951 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 MINPP1Q9UNW1 487 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 ATP6V0A2Q9Y487 856 aa14.13□□□□□ -0.15
ARFGEF1-202ENST00000517955 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
ARFGEF1-202ENST00000517955 CC2D2BQ6DHV5 1058 aa14.12□□□□□ -0.15
ARFGEF1-202ENST00000517955 ZNF622Q969S3 477 aaKnown RBP eCLIP14.12□□□□□ -0.15
ARFGEF1-202ENST00000517955 ANKRD2Q9GZV1 360 aa14.12□□□□□ -0.15
ARFGEF1-202ENST00000517955 SIL1Q9H173 461 aa14.12□□□□□ -0.15
ARFGEF1-202ENST00000517955 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
ARFGEF1-202ENST00000517955 PIM2Q9P1W9 311 aa14.12□□□□□ -0.15
ARFGEF1-202ENST00000517955 CEP126Q9P2H0 1117 aa14.12□□□□□ -0.15
ARFGEF1-202ENST00000517955 A0A0G2JLW4 131 aa14.11□□□□□ -0.15
ARFGEF1-202ENST00000517955 PPEF1O14829 653 aaPredicted RBP14.11□□□□□ -0.15
ARFGEF1-202ENST00000517955 PDE8BO95263 885 aa14.11□□□□□ -0.15
ARFGEF1-202ENST00000517955 CHRNDQ07001 517 aa14.11□□□□□ -0.15
ARFGEF1-202ENST00000517955 OS9Q13438 667 aaPredicted RBP14.11□□□□□ -0.15
ARFGEF1-202ENST00000517955 PRPF40BQ6NWY9 871 aaKnown RBP14.11□□□□□ -0.15
ARFGEF1-202ENST00000517955 AKAP2Q9Y2D5 859 aa14.11□□□□□ -0.15
ARFGEF1-202ENST00000517955 SLX4Q8IY92 1834 aa14.11□□□□□ -0.15
ARFGEF1-202ENST00000517955 FGFR2P21802 821 aa14.1□□□□□ -0.15
ARFGEF1-202ENST00000517955 ANKRD45Q5TZF3 282 aa14.1□□□□□ -0.15
ARFGEF1-202ENST00000517955 CHD1LQ86WJ1 897 aa14.1□□□□□ -0.15
ARFGEF1-202ENST00000517955 TSPYL2Q9H2G4 693 aaPredicted RBP14.1□□□□□ -0.15
ARFGEF1-202ENST00000517955 SPEF2Q9C093 1822 aa14.1□□□□□ -0.15
ARFGEF1-202ENST00000517955 A0A1B0GUL6 1792 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 SNED1Q8TER0 1413 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 NUBP1P53384 320 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 TFCP2Q12800 502 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 UBE4AQ14139 1066 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 METTL24Q5JXM2 366 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 SOGA3Q5TF21 947 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 CLASRPQ8N2M8 674 aaKnown RBP14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 SYT17Q9BSW7 474 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 FHDC1Q9C0D6 1143 aaPredicted RBP14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 LEMD3Q9Y2U8 911 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 LTBP1Q14766 1721 aa14.09□□□□□ -0.15
ARFGEF1-202ENST00000517955 XDHP47989 1333 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms