RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 TNNI3KQ59H18 835 aa15.23■□□□□ 0.03
PHF3-212ENST00000515594 NEUROD6Q96NK8 337 aa15.23■□□□□ 0.03
PHF3-212ENST00000515594 FPGT-TNNI3KV9GXZ4 949 aa15.23■□□□□ 0.03
PHF3-212ENST00000515594 NCBP1Q09161 790 aaKnown RBP15.23■□□□□ 0.03
PHF3-212ENST00000515594 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
PHF3-212ENST00000515594 PLA2G4DQ86XP0 818 aa15.23■□□□□ 0.03
PHF3-212ENST00000515594 TIMM10P62072 90 aa15.22■□□□□ 0.03
PHF3-212ENST00000515594 ZNF790Q6PG37 636 aa15.22■□□□□ 0.03
PHF3-212ENST00000515594 SMAP1Q8IYB5 467 aaPredicted RBP15.22■□□□□ 0.03
PHF3-212ENST00000515594 USP28Q96RU2 1077 aa15.22■□□□□ 0.03
PHF3-212ENST00000515594 GOLIM4O00461 696 aa15.22■□□□□ 0.03
PHF3-212ENST00000515594 CTDNEP1O95476 244 aa15.22■□□□□ 0.03
PHF3-212ENST00000515594 DDX58O95786 925 aaKnown RBP15.22■□□□□ 0.03
PHF3-212ENST00000515594 NPHP1O15259 732 aa15.21■□□□□ 0.03
PHF3-212ENST00000515594 TPD52L1Q16890 204 aaPredicted RBP15.21■□□□□ 0.03
PHF3-212ENST00000515594 TTLL5Q6EMB2 1281 aa15.21■□□□□ 0.03
PHF3-212ENST00000515594 DDX19AQ9NUU7 478 aaKnown RBP15.21■□□□□ 0.03
PHF3-212ENST00000515594 ANKARQ7Z5J8 1434 aa15.21■□□□□ 0.03
PHF3-212ENST00000515594 HIP1O00291 1037 aa15.21■□□□□ 0.03
PHF3-212ENST00000515594 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
PHF3-212ENST00000515594 ANKRD1Q15327 319 aa15.21■□□□□ 0.03
PHF3-212ENST00000515594 ARHGEF25Q86VW2 580 aa15.21■□□□□ 0.03
PHF3-212ENST00000515594 CCAR1Q8IX12 1150 aaKnown RBP15.21■□□□□ 0.03
PHF3-212ENST00000515594 ARHGAP23Q9P227 1491 aa15.21■□□□□ 0.03
PHF3-212ENST00000515594 NLRP2Q9NX02 1062 aa15.2■□□□□ 0.02
PHF3-212ENST00000515594 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
PHF3-212ENST00000515594 TDRD7Q8NHU6 1098 aaKnown RBP15.2■□□□□ 0.02
PHF3-212ENST00000515594 LMO7Q8WWI1 1683 aa15.2■□□□□ 0.02
PHF3-212ENST00000515594 CHD2O14647 1828 aaKnown RBP15.2■□□□□ 0.02
PHF3-212ENST00000515594 SLIT1O75093 1534 aa15.2■□□□□ 0.02
PHF3-212ENST00000515594 PTPDC1A2A3K4 754 aa15.2■□□□□ 0.02
PHF3-212ENST00000515594 RFX5P48382 616 aaPredicted RBP15.2■□□□□ 0.02
PHF3-212ENST00000515594 PTPN21Q16825 1174 aa15.2■□□□□ 0.02
PHF3-212ENST00000515594 ZNF594Q96JF6 807 aaPredicted RBP15.2■□□□□ 0.02
PHF3-212ENST00000515594 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
PHF3-212ENST00000515594 HEG1Q9ULI3 1381 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 A0A087WZG4 1122 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 HAND2P61296 217 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 AMOTQ4VCS5 1084 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 IQCB1Q15051 598 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 ISM2Q6H9L7 571 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 LMBR1LQ6UX01 489 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
PHF3-212ENST00000515594 RGPD5Q99666 1765 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 UTYO14607 1347 aa15.19■□□□□ 0.02
PHF3-212ENST00000515594 C5P01031 1676 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 RBM43Q6ZSC3 357 aaKnown RBP15.18■□□□□ 0.02
PHF3-212ENST00000515594 CABLES1Q8TDN4 633 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 ANKRD7Q92527 254 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 SNRKQ9NRH2 765 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 BIN1O00499 593 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 FMNL2Q96PY5 1086 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 A0A1B0GVL5 298 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 ATP5JP18859 108 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 ME1P48163 572 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
PHF3-212ENST00000515594 ILDR1Q86SU0 546 aaPredicted RBP15.18■□□□□ 0.02
PHF3-212ENST00000515594 METTL22Q9BUU2 404 aaPredicted RBP15.18■□□□□ 0.02
PHF3-212ENST00000515594 POLR3DP05423 398 aaPredicted RBP15.17■□□□□ 0.02
PHF3-212ENST00000515594 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
PHF3-212ENST00000515594 AOPEPQ8N6M6 819 aa15.17■□□□□ 0.02
PHF3-212ENST00000515594 HMG20BQ9P0W2 317 aa15.17■□□□□ 0.02
PHF3-212ENST00000515594 CTIFO43310 598 aaKnown RBP15.17■□□□□ 0.02
PHF3-212ENST00000515594 DMTNQ08495 405 aa15.17■□□□□ 0.02
PHF3-212ENST00000515594 SNW1Q13573 536 aaKnown RBP15.17■□□□□ 0.02
PHF3-212ENST00000515594 LAMA4Q16363 1823 aa15.16■□□□□ 0.02
PHF3-212ENST00000515594 CHRNA2Q15822 529 aa15.16■□□□□ 0.02
PHF3-212ENST00000515594 LRRC8AQ8IWT6 810 aa15.16■□□□□ 0.02
PHF3-212ENST00000515594 FSIP1Q8NA03 581 aa15.16■□□□□ 0.02
PHF3-212ENST00000515594 BECN2A8MW95 431 aa15.15■□□□□ 0.02
PHF3-212ENST00000515594 KDM6AO15550 1401 aaPredicted RBP15.15■□□□□ 0.02
PHF3-212ENST00000515594 LRRC24Q50LG9 513 aa15.15■□□□□ 0.02
PHF3-212ENST00000515594 JCADQ9P266 1359 aa15.15■□□□□ 0.02
PHF3-212ENST00000515594 TPM3P06753 285 aa15.15■□□□□ 0.02
PHF3-212ENST00000515594 SKILP12757 684 aa15.15■□□□□ 0.02
PHF3-212ENST00000515594 DHX40Q8IX18 779 aaKnown RBP15.15■□□□□ 0.02
PHF3-212ENST00000515594 SLC52A2Q9HAB3 445 aa15.15■□□□□ 0.02
PHF3-212ENST00000515594 COPRSQ9NQ92 184 aa15.15■□□□□ 0.02
PHF3-212ENST00000515594 CCDC69A6NI79 296 aa15.14■□□□□ 0.01
PHF3-212ENST00000515594 TSGA10IPQ3SY00 556 aa15.14■□□□□ 0.01
PHF3-212ENST00000515594 CCDC112Q8NEF3 446 aa15.14■□□□□ 0.01
PHF3-212ENST00000515594 DENND2AQ9ULE3 1009 aa15.14■□□□□ 0.01
PHF3-212ENST00000515594 CEP135Q66GS9 1140 aa15.14■□□□□ 0.01
PHF3-212ENST00000515594 LRP10Q7Z4F1 713 aa15.14■□□□□ 0.01
PHF3-212ENST00000515594 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
PHF3-212ENST00000515594 HAUS7Q99871 368 aa15.14■□□□□ 0.01
PHF3-212ENST00000515594 PUS3Q9BZE2 481 aaKnown RBP15.14■□□□□ 0.01
PHF3-212ENST00000515594 ZNF215Q9UL58 517 aaPredicted RBP15.14■□□□□ 0.01
PHF3-212ENST00000515594 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
PHF3-212ENST00000515594 PI16Q6UXB8 463 aa15.13■□□□□ 0.01
PHF3-212ENST00000515594 LRRN4CLQ8ND94 238 aa15.13■□□□□ 0.01
PHF3-212ENST00000515594 SMARCC2Q8TAQ2 1214 aa15.13■□□□□ 0.01
PHF3-212ENST00000515594 CFAP45Q9UL16 551 aa15.13■□□□□ 0.01
PHF3-212ENST00000515594 ZNF330Q9Y3S2 320 aaPredicted RBP15.13■□□□□ 0.01
PHF3-212ENST00000515594 E7EWF7 191 aa15.13■□□□□ 0.01
PHF3-212ENST00000515594 KRT32Q14532 448 aa15.13■□□□□ 0.01
PHF3-212ENST00000515594 DPCR1Q3MIW9 517 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms