RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
SNF8-214ENST00000515174 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
SNF8-214ENST00000515174 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 CACNA1SQ13698 1873 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
SNF8-214ENST00000515174 RAD50Q92878 1312 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 PHF14O94880 888 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 HAUS7Q99871 368 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 UTP14AQ9BVJ6 771 aaKnown RBP12.37□□□□□ -0.43
SNF8-214ENST00000515174 BCL11AQ9H165 835 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 CD2APQ9Y5K6 639 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 COL11A2P13942 1736 aaPredicted RBP12.37□□□□□ -0.43
SNF8-214ENST00000515174 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
SNF8-214ENST00000515174 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
SNF8-214ENST00000515174 HSPA4P34932 840 aa12.36□□□□□ -0.43
SNF8-214ENST00000515174 MCM2P49736 904 aa12.36□□□□□ -0.43
SNF8-214ENST00000515174 KCNB2Q92953 911 aa12.36□□□□□ -0.43
SNF8-214ENST00000515174 ZNF512BQ96KM6 892 aaPredicted RBP12.36□□□□□ -0.43
SNF8-214ENST00000515174 CHMP3Q9Y3E7 222 aa12.36□□□□□ -0.43
SNF8-214ENST00000515174 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 K7ELQ4 463 aaPredicted RBP12.35□□□□□ -0.43
SNF8-214ENST00000515174 GPTP24298 496 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 SLC10A5Q5PT55 438 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 SUSD4Q5VX71 490 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 FLAD1Q8NFF5 587 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 LSG1Q9H089 658 aaKnown RBP12.35□□□□□ -0.43
SNF8-214ENST00000515174 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
SNF8-214ENST00000515174 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
SNF8-214ENST00000515174 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
SNF8-214ENST00000515174 TAF1P21675 1872 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 AK9Q5TCS8 1911 aa12.35□□□□□ -0.43
SNF8-214ENST00000515174 ST18O60284 1047 aa12.34□□□□□ -0.43
SNF8-214ENST00000515174 ITGA6P23229 1130 aa12.34□□□□□ -0.43
SNF8-214ENST00000515174 DDIT3P35638 169 aa12.34□□□□□ -0.43
SNF8-214ENST00000515174 RTL5Q5HYW3 569 aaPredicted RBP12.34□□□□□ -0.43
SNF8-214ENST00000515174 DBNDD2Q9BQY9 259 aa12.34□□□□□ -0.43
SNF8-214ENST00000515174 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
SNF8-214ENST00000515174 ANO2Q9NQ90 1003 aa12.34□□□□□ -0.43
SNF8-214ENST00000515174 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
SNF8-214ENST00000515174 COL4A1P02462 1669 aa12.33□□□□□ -0.44
SNF8-214ENST00000515174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.33□□□□□ -0.44
SNF8-214ENST00000515174 A0A1B0GUL7 405 aa12.33□□□□□ -0.44
SNF8-214ENST00000515174 NTSR2O95665 410 aa12.33□□□□□ -0.44
SNF8-214ENST00000515174 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
SNF8-214ENST00000515174 LDHAL6AQ6ZMR3 332 aa12.33□□□□□ -0.44
SNF8-214ENST00000515174 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
SNF8-214ENST00000515174 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
SNF8-214ENST00000515174 GREM2Q9H772 168 aa12.33□□□□□ -0.44
SNF8-214ENST00000515174 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
SNF8-214ENST00000515174 ZNF609O15014 1411 aa12.33□□□□□ -0.44
SNF8-214ENST00000515174 MAP4K4O95819 1239 aaPredicted RBP12.32□□□□□ -0.44
SNF8-214ENST00000515174 ADRA2BP18089 450 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 TIMM10P62072 90 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 SF3B3Q15393 1217 aaKnown RBP12.32□□□□□ -0.44
SNF8-214ENST00000515174 CCDC152Q4G0S7 254 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 SYNE4Q8N205 404 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 VGLL2Q8N8G2 317 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 MAP4K1Q92918 833 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 TM6SF1Q9BZW5 370 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 NIP7Q9Y221 180 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNF8-214ENST00000515174 CEP350Q5VT06 3117 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 MROH5Q6ZUA9 1318 aa12.32□□□□□ -0.44
SNF8-214ENST00000515174 SSFA2P28290 1259 aa12.31□□□□□ -0.44
SNF8-214ENST00000515174 APLP1P51693 650 aa12.31□□□□□ -0.44
SNF8-214ENST00000515174 LRRFIP1Q32MZ4 808 aaKnown RBP12.31□□□□□ -0.44
SNF8-214ENST00000515174 TSGA10IPQ3SY00 556 aa12.31□□□□□ -0.44
SNF8-214ENST00000515174 CCDC158Q5M9N0 1113 aa12.31□□□□□ -0.44
SNF8-214ENST00000515174 CWC27Q6UX04 472 aaKnown RBP12.31□□□□□ -0.44
SNF8-214ENST00000515174 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
SNF8-214ENST00000515174 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
SNF8-214ENST00000515174 IL25Q9H293 177 aa12.31□□□□□ -0.44
SNF8-214ENST00000515174 DLEC1Q9Y238 1755 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 ZBTB22O15209 634 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 PDE8BO95263 885 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 NECTIN1Q15223 517 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 NEUROD6Q96NK8 337 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 FSD1Q9BTV5 496 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
SNF8-214ENST00000515174 HELLSQ9NRZ9 838 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 ARAP2Q8WZ64 1704 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 MED23Q9ULK4 1368 aa12.3□□□□□ -0.44
SNF8-214ENST00000515174 CD2BP2O95400 341 aaKnown RBP12.29□□□□□ -0.44
SNF8-214ENST00000515174 FGFR2P21802 821 aa12.29□□□□□ -0.44
SNF8-214ENST00000515174 NMIQ13287 307 aaPredicted RBP12.29□□□□□ -0.44
SNF8-214ENST00000515174 METTL24Q5JXM2 366 aa12.29□□□□□ -0.44
SNF8-214ENST00000515174 TBC1D9BQ66K14 1250 aa12.29□□□□□ -0.44
SNF8-214ENST00000515174 XAGE2Q96GT9 111 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms