RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 RASA3Q14644 834 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 BRD3Q15059 726 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 MAPRE1Q15691 268 aaKnown RBP7.91□□□□□ -1.14
CHD1-208ENST00000512392 NBPF6Q5VWK0 638 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 ITPKCQ96DU7 683 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 NBPF4Q96M43 638 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 PPCSQ9HAB8 311 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 DNAAF2Q9NVR5 837 aaKnown RBP7.91□□□□□ -1.14
CHD1-208ENST00000512392 CCDC85CA6NKD9 419 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 CDC27P30260 824 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 USP4Q13107 963 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 TKFCQ3LXA3 575 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 ZNF784Q8NCA9 323 aaPredicted RBP7.91□□□□□ -1.14
CHD1-208ENST00000512392 ZHX3Q9H4I2 956 aa7.91□□□□□ -1.14
CHD1-208ENST00000512392 CAPN5O15484 640 aaPredicted RBP7.9□□□□□ -1.14
CHD1-208ENST00000512392 LILRA1O75019 489 aa7.9□□□□□ -1.14
CHD1-208ENST00000512392 ALDH1L1O75891 902 aa7.9□□□□□ -1.14
CHD1-208ENST00000512392 POU3F3P20264 500 aaPredicted RBP7.9□□□□□ -1.14
CHD1-208ENST00000512392 MZF1P28698 734 aaPredicted RBP7.9□□□□□ -1.14
CHD1-208ENST00000512392 SEC13P55735 322 aa7.9□□□□□ -1.14
CHD1-208ENST00000512392 SIM2Q14190 667 aaPredicted RBP7.9□□□□□ -1.14
CHD1-208ENST00000512392 CRIPAKQ8N1N5 446 aa7.9□□□□□ -1.14
CHD1-208ENST00000512392 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
CHD1-208ENST00000512392 PTPRHQ9HD43 1115 aa7.9□□□□□ -1.14
CHD1-208ENST00000512392 CTDP1Q9Y5B0 961 aaPredicted RBP7.9□□□□□ -1.14
CHD1-208ENST00000512392 SFI1A8K8P3 1242 aa7.9□□□□□ -1.15
CHD1-208ENST00000512392 ETFBP38117 255 aa7.9□□□□□ -1.15
CHD1-208ENST00000512392 FKBP5Q13451 457 aaPredicted RBP7.9□□□□□ -1.15
CHD1-208ENST00000512392 KCTD2Q14681 263 aa7.9□□□□□ -1.15
CHD1-208ENST00000512392 PPM1EQ8WY54 764 aa7.9□□□□□ -1.15
CHD1-208ENST00000512392 DEPDC7Q96QD5 511 aa7.9□□□□□ -1.15
CHD1-208ENST00000512392 ESF1Q9H501 851 aaKnown RBP7.9□□□□□ -1.15
CHD1-208ENST00000512392 LZTS1Q9Y250 596 aa7.9□□□□□ -1.15
CHD1-208ENST00000512392 TBX3O15119 743 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 GPR182O15218 404 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 MYCP01106 439 aaPredicted RBP7.89□□□□□ -1.15
CHD1-208ENST00000512392 CALRP27797 417 aaKnown RBP7.89□□□□□ -1.15
CHD1-208ENST00000512392 EML3Q32P44 896 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 OXLD1Q5BKU9 147 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 TTC30BQ8N4P2 665 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 PAF1Q8N7H5 531 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 NGDNQ8NEJ9 315 aaKnown RBP7.89□□□□□ -1.15
CHD1-208ENST00000512392 APPBP2Q92624 585 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 CCDC87Q9NVE4 849 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 NOD1Q9Y239 953 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 MRVI1Q9Y6F6 885 aa7.89□□□□□ -1.15
CHD1-208ENST00000512392 DHX16O60231 1041 aaKnown RBP7.88□□□□□ -1.15
CHD1-208ENST00000512392 HSP90AA1P07900 732 aaKnown RBP7.88□□□□□ -1.15
CHD1-208ENST00000512392 COL6A1P12109 1028 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 RAPGEF1Q13905 1077 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 TTF1Q15361 905 aaPredicted RBP7.88□□□□□ -1.15
CHD1-208ENST00000512392 INO80DQ53TQ3 878 aaPredicted RBP7.88□□□□□ -1.15
CHD1-208ENST00000512392 DALRD3Q5D0E6 543 aaKnown RBP7.88□□□□□ -1.15
CHD1-208ENST00000512392 ARSHQ5FYA8 562 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 Q6ZVU0 165 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 IPO4Q8TEX9 1081 aaKnown RBP7.88□□□□□ -1.15
CHD1-208ENST00000512392 SIRPGQ9P1W8 387 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 ATP8A1Q9Y2Q0 1164 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 DYTNA2CJ06 578 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 AXIN1O15169 862 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 TIMM44O43615 452 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 MYL1P05976 194 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 NPR3P17342 541 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 ADD1P35611 737 aaKnown RBP7.88□□□□□ -1.15
CHD1-208ENST00000512392 PPP2R5AQ15172 486 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 CCDC96Q2M329 555 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 ANKS3Q6ZW76 656 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 TPCN2Q8NHX9 752 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 AS3MTQ9HBK9 375 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 ANAPC4Q9UJX5 808 aa7.88□□□□□ -1.15
CHD1-208ENST00000512392 NPHP1O15259 732 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 KLF4O43474 513 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 MPSTP25325 297 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 SCTRP47872 440 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 KANK3Q6NY19 840 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 RUNDC1Q96C34 613 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 GPRASP2Q96D09 838 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 CRELD1Q96HD1 420 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 DNAJC7Q99615 494 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 GGT7Q9UJ14 662 aa7.87□□□□□ -1.15
CHD1-208ENST00000512392 SHTN1A0MZ66 631 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 SCGB1D2O95969 90 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 SIX5Q8N196 739 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 HELQQ8TDG4 1101 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 CDC5LQ99459 802 aaKnown RBP7.86□□□□□ -1.15
CHD1-208ENST00000512392 MUC3BQ9H195 1237 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 FRMD4BQ9Y2L6 1034 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 NDUFB5O43674 189 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 PTPN12Q05209 780 aaKnown RBP7.86□□□□□ -1.15
CHD1-208ENST00000512392 TMEM95Q3KNT9 176 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 CCDC174Q6PII3 467 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 Q6ZNB5 142 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 ARMCX6Q7L4S7 300 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 CHPFQ8IZ52 775 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 MEIOBQ8N635 442 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
CHD1-208ENST00000512392 OSBPL3Q9H4L5 887 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 AAASQ9NRG9 546 aa7.86□□□□□ -1.15
CHD1-208ENST00000512392 MRPS23Q9Y3D9 190 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms