RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 SNX14Q9Y5W7 946 aa5.76□□□□□ -1.49
PDLIM5-214ENST00000510099 RPAP1Q9BWH6 1393 aaPredicted RBP5.76□□□□□ -1.49
PDLIM5-214ENST00000510099 ITGB4P16144 1822 aa5.76□□□□□ -1.49
PDLIM5-214ENST00000510099 SPATA31A5Q5VU36 1347 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 SPATA31A7Q8IWB4 1347 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 CDHR2Q9BYE9 1310 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 A0A0D9SFI3 127 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 EYA2O00167 538 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 EXOC5O00471 708 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 CYP19A1P11511 503 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 IL15P40933 162 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 PTGER2P43116 358 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 NUCB2P80303 420 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 NMIQ13287 307 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 HSP90AB3PQ58FF7 597 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 GIGYF2Q6Y7W6 1299 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 BARGINQ6ZT62 677 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 KIAA1211Q6ZU35 1233 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 TICAM2Q86XR7 235 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 ZGPATQ8N5A5 531 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 INTS4Q96HW7 963 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 FAM227BQ96M60 508 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 HAUS7Q99871 368 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 FSD1Q9BTV5 496 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 UPF3BQ9BZI7 483 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 BOLA2Q9H3K6 86 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 ZSWIM6Q9HCJ5 1215 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 ZBTB1Q9Y2K1 713 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 AK9Q5TCS8 1911 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 PALLDQ8WX93 1383 aa5.75□□□□□ -1.49
PDLIM5-214ENST00000510099 ERVV-1B6SEH8 477 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 TRAK2O60296 914 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 IL6STP40189 918 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 PTH1RQ03431 593 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 ARSIQ5FYB1 569 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 GPR153Q6NV75 609 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 NLRP10Q86W26 655 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 ZBTB38Q8NAP3 1195 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 DBNDD2Q9BQY9 259 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 TM6SF1Q9BZW5 370 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 CHMP3Q9Y3E7 222 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 ABCC12Q96J65 1359 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 SPEF2Q9C093 1822 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 SH3TC1Q8TE82 1336 aa5.74□□□□□ -1.49
PDLIM5-214ENST00000510099 ANKRD36CQ5JPF3 1778 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 FSD2A1L4K1 749 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 BAG4O95429 457 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 ADAMTS2O95450 1211 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 BRD1O95696 1058 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 CSF1RP07333 972 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 PRIM1P49642 420 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 CTSWP56202 376 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 PKP1Q13835 747 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 NECTIN1Q15223 517 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 DDB1Q16531 1140 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 HLFQ16534 295 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 LRRC24Q50LG9 513 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 CREB3L3Q68CJ9 461 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 PRPF40BQ6NWY9 871 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 RUFY3Q7L099 469 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 ZNF589Q86UQ0 364 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 MARCH10Q8NA82 808 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 MAP4K1Q92918 833 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 KHSRPQ92945 711 aaKnown RBP eCLIP5.73□□□□□ -1.492e-7■■■■□ 25.5
PDLIM5-214ENST00000510099 EDC3Q96F86 508 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 HMG20BQ9P0W2 317 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 ZDHHC9Q9Y397 364 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 ZNF330Q9Y3S2 320 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 RBM8AQ9Y5S9 174 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 UBN2Q6ZU65 1347 aa5.73□□□□□ -1.49
PDLIM5-214ENST00000510099 A0A1B0GUL7 405 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 GOLGA6L22H0YM25 854 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 SLC27A2O14975 620 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 TOM1O60784 492 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 TAF5LO75529 589 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 ZKSCAN1P17029 563 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 CASTP20810 708 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 AK2P54819 239 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 EIF5P55010 431 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 CCDC57Q2TAC2 916 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 SKOR2Q2VWA4 1001 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 TSGA10IPQ3SY00 556 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 VPS53Q5VIR6 699 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 USPL1Q5W0Q7 1092 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 IFNLR1Q8IU57 520 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 ZNF34Q8IZ26 560 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 KBTBD3Q8NAB2 608 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 SYTL4Q96C24 671 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 FAM89AQ96GI7 184 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 ZNF594Q96JF6 807 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 JAKMIP1Q96N16 626 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 DNAJC2Q99543 621 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 PUS3Q9BZE2 481 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 CCDC87Q9NVE4 849 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 ISY1Q9ULR0 285 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 ZNF831Q5JPB2 1677 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 THSD7AQ9UPZ6 1657 aa5.72□□□□□ -1.49
PDLIM5-214ENST00000510099 BCL9LQ86UU0 1499 aa5.71□□□□□ -1.49
PDLIM5-214ENST00000510099 LOC102724428A0A0B4J2F2 783 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms