RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 MAMSTRQ6ZN01 415 aa8.4□□□□□ -1.06
MATR3-215ENST00000510056 TMC7Q7Z402 723 aa8.4□□□□□ -1.06
MATR3-215ENST00000510056 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
MATR3-215ENST00000510056 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
MATR3-215ENST00000510056 HSPA6P17066 643 aa8.4□□□□□ -1.06
MATR3-215ENST00000510056 ELOAQ14241 798 aaKnown RBP8.4□□□□□ -1.06
MATR3-215ENST00000510056 EMILIN1Q9Y6C2 1016 aa8.4□□□□□ -1.06
MATR3-215ENST00000510056 NAA30Q147X3 362 aaPredicted RBP8.4□□□□□ -1.07
MATR3-215ENST00000510056 MAF1Q9H063 256 aa8.4□□□□□ -1.07
MATR3-215ENST00000510056 TFCP2L1Q9NZI6 479 aa8.4□□□□□ -1.07
MATR3-215ENST00000510056 COL18A1P39060 1754 aa8.4□□□□□ -1.07
MATR3-215ENST00000510056 MICALL2Q8IY33 904 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 FAM200AQ8TCP9 573 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 CLP1Q92989 425 aaKnown RBP8.39□□□□□ -1.07
MATR3-215ENST00000510056 BCL9O00512 1426 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 USP6P35125 1406 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 ICMTO60725 284 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 FBXO45P0C2W1 286 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 SYCP2LQ5T4T6 812 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 CCDC181Q5TID7 509 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 PNPLA7Q6ZV29 1317 aa8.39□□□□□ -1.07
MATR3-215ENST00000510056 BTAF1O14981 1849 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 GRIN3BO60391 1043 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 MSL1Q68DK7 614 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 ARHGEF25Q86VW2 580 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 DCTN4Q9UJW0 460 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 INPP5FQ9Y2H2 1132 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 PAPPAQ13219 1627 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 CPSF1Q10570 1443 aaKnown RBP8.38□□□□□ -1.07
MATR3-215ENST00000510056 BRD4O60885 1362 aaPredicted RBP8.38□□□□□ -1.07
MATR3-215ENST00000510056 C4orf46Q504U0 113 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 CLEC4GQ6UXB4 293 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 NUTM1Q86Y26 1132 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 AKT1S1Q96B36 256 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 NLRP2Q9NX02 1062 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.38□□□□□ -1.07
MATR3-215ENST00000510056 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
MATR3-215ENST00000510056 OCLNQ16625 522 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 NBPF1Q3BBV0 1214 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 ANKRD13DQ6ZTN6 518 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 SYTL4Q96C24 671 aaPredicted RBP8.37□□□□□ -1.07
MATR3-215ENST00000510056 SLIT3O75094 1523 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 BDNFP23560 247 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 RNF187Q5TA31 235 aaPredicted RBP8.37□□□□□ -1.07
MATR3-215ENST00000510056 SLC16A10Q8TF71 515 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 MTA3Q9BTC8 594 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 TMEM106CQ9BVX2 250 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 TNS2Q63HR2 1409 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 KRBA2Q6ZNG9 492 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 PGBD3Q8N328 593 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 VTI1BQ9UEU0 232 aa8.37□□□□□ -1.07
MATR3-215ENST00000510056 CD46P15529 392 aa8.36□□□□□ -1.07
MATR3-215ENST00000510056 DDX54Q8TDD1 881 aaKnown RBP8.36□□□□□ -1.07
MATR3-215ENST00000510056 KLF15Q9UIH9 416 aa8.36□□□□□ -1.07
MATR3-215ENST00000510056 PIK3C2AO00443 1686 aa8.36□□□□□ -1.07
MATR3-215ENST00000510056 RNF34Q969K3 372 aa8.36□□□□□ -1.07
MATR3-215ENST00000510056 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
MATR3-215ENST00000510056 TGIF2Q9GZN2 237 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 MRVI1Q9Y6F6 885 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 TUBGCP6Q96RT7 1819 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 ZNF76P36508 570 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 RBL2Q08999 1139 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 TMEM92Q6UXU6 159 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 USP48Q86UV5 1035 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 RNPC3Q96LT9 517 aaKnown RBP8.35□□□□□ -1.07
MATR3-215ENST00000510056 MRS2Q9HD23 443 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 CCDC7Q96M83 1385 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 FMNL1O95466 1100 aaPredicted RBP8.35□□□□□ -1.07
MATR3-215ENST00000510056 IL2RBP14784 551 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 GYS2P54840 703 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 C10orf62Q5T681 223 aaPredicted RBP8.35□□□□□ -1.07
MATR3-215ENST00000510056 JAMLQ86YT9 394 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 KCNH5Q8NCM2 988 aa8.35□□□□□ -1.07
MATR3-215ENST00000510056 CENPJQ9HC77 1338 aaPredicted RBP8.34□□□□□ -1.07
MATR3-215ENST00000510056 F6X3S4 739 aa8.34□□□□□ -1.07
MATR3-215ENST00000510056 ANKMY2Q8IV38 441 aa8.34□□□□□ -1.07
MATR3-215ENST00000510056 IL17RAQ96F46 866 aa8.34□□□□□ -1.07
MATR3-215ENST00000510056 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
MATR3-215ENST00000510056 TTC21BQ7Z4L5 1316 aa8.34□□□□□ -1.07
MATR3-215ENST00000510056 PDGFRBP09619 1106 aa8.34□□□□□ -1.07
MATR3-215ENST00000510056 PODNQ7Z5L7 613 aa8.34□□□□□ -1.07
MATR3-215ENST00000510056 SPC25Q9HBM1 224 aa8.34□□□□□ -1.07
MATR3-215ENST00000510056 MAP3K20Q9NYL2 800 aaKnown RBP8.34□□□□□ -1.07
MATR3-215ENST00000510056 COL23A1Q86Y22 540 aaPredicted RBP8.33□□□□□ -1.08
MATR3-215ENST00000510056 FAM221BA6H8Z2 402 aa8.33□□□□□ -1.08
MATR3-215ENST00000510056 C21orf2O43822 256 aa8.33□□□□□ -1.08
MATR3-215ENST00000510056 HSD3B2P26439 372 aa8.33□□□□□ -1.08
MATR3-215ENST00000510056 SLC27A3Q5K4L6 730 aa8.33□□□□□ -1.08
MATR3-215ENST00000510056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.33□□□□□ -1.084e-7■■■□□ 14.8
MATR3-215ENST00000510056 SFMBT1Q9UHJ3 866 aa8.33□□□□□ -1.08
MATR3-215ENST00000510056 PCDHGA10Q9Y5H3 936 aa8.33□□□□□ -1.08
MATR3-215ENST00000510056 SECISBP2LQ93073 1101 aaKnown RBP8.32□□□□□ -1.08
MATR3-215ENST00000510056 UBA5Q9GZZ9 404 aa8.32□□□□□ -1.08
MATR3-215ENST00000510056 TRPM1Q7Z4N2 1603 aa8.32□□□□□ -1.08
MATR3-215ENST00000510056 ABCC6O95255 1503 aa8.32□□□□□ -1.08
MATR3-215ENST00000510056 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms