RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 KCNQ5Q9NR82 932 aa20.82■□□□□ 0.92
LMNA-222ENST00000508500 ADARB2Q9NS39 739 aaKnown RBP20.82■□□□□ 0.92
LMNA-222ENST00000508500 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
LMNA-222ENST00000508500 ZNF646O15015 1829 aaPredicted RBP20.81■□□□□ 0.92
LMNA-222ENST00000508500 C6orf229H3BNL8 230 aa20.81■□□□□ 0.92
LMNA-222ENST00000508500 HIRAP54198 1017 aaPredicted RBP20.81■□□□□ 0.92
LMNA-222ENST00000508500 FLIIQ13045 1269 aa20.81■□□□□ 0.92
LMNA-222ENST00000508500 CCDC152Q4G0S7 254 aa20.81■□□□□ 0.92
LMNA-222ENST00000508500 H7C1W4 665 aa20.8■□□□□ 0.92
LMNA-222ENST00000508500 TNIP1Q15025 636 aa20.8■□□□□ 0.92
LMNA-222ENST00000508500 TTLL11Q8NHH1 800 aa20.8■□□□□ 0.92
LMNA-222ENST00000508500 ZBTB12Q9Y330 459 aaPredicted RBP20.8■□□□□ 0.92
LMNA-222ENST00000508500 RTL9Q8NET4 1388 aa20.8■□□□□ 0.92
LMNA-222ENST00000508500 TRAF5O00463 557 aa20.79■□□□□ 0.92
LMNA-222ENST00000508500 PSMD14O00487 310 aa20.79■□□□□ 0.92
LMNA-222ENST00000508500 HSP90B1P14625 803 aaKnown RBP20.79■□□□□ 0.92
LMNA-222ENST00000508500 CTSWP56202 376 aa20.79■□□□□ 0.92
LMNA-222ENST00000508500 DOK7Q18PE1 504 aa20.79■□□□□ 0.92
LMNA-222ENST00000508500 WTIPA6NIX2 430 aaPredicted RBP20.78■□□□□ 0.92
LMNA-222ENST00000508500 ECE2O60344 883 aa20.78■□□□□ 0.92
LMNA-222ENST00000508500 CTCFP49711 727 aaPredicted RBP20.78■□□□□ 0.92
LMNA-222ENST00000508500 CASP7P55210 303 aa20.78■□□□□ 0.92
LMNA-222ENST00000508500 NEXNQ0ZGT2 675 aa20.78■□□□□ 0.92
LMNA-222ENST00000508500 DEFB115Q30KQ5 88 aa20.78■□□□□ 0.92
LMNA-222ENST00000508500 TRPM4Q8TD43 1214 aa20.78■□□□□ 0.92
LMNA-222ENST00000508500 BCL2L13Q9BXK5 485 aa20.78■□□□□ 0.92
LMNA-222ENST00000508500 PGAP2Q9UHJ9 254 aa20.78■□□□□ 0.92
LMNA-222ENST00000508500 CNOT7Q9UIV1 285 aaKnown RBP20.78■□□□□ 0.92
LMNA-222ENST00000508500 A0A1B0GUL6 1792 aa20.77■□□□□ 0.92
LMNA-222ENST00000508500 GCKRQ14397 625 aa20.77■□□□□ 0.92
LMNA-222ENST00000508500 CST9Q5W186 159 aa20.77■□□□□ 0.92
LMNA-222ENST00000508500 UBE3BQ7Z3V4 1068 aa20.77■□□□□ 0.92
LMNA-222ENST00000508500 GREM2Q9H772 168 aa20.77■□□□□ 0.92
LMNA-222ENST00000508500 WDR33Q9C0J8 1336 aaKnown RBP20.77■□□□□ 0.91
LMNA-222ENST00000508500 FKBP5Q13451 457 aaPredicted RBP20.76■□□□□ 0.91
LMNA-222ENST00000508500 ANKRD18AQ8IVF6 992 aa20.76■□□□□ 0.91
LMNA-222ENST00000508500 DNAAF4Q8WXU2 420 aa20.76■□□□□ 0.91
LMNA-222ENST00000508500 EYA3Q99504 573 aa20.76■□□□□ 0.91
LMNA-222ENST00000508500 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
LMNA-222ENST00000508500 UFL1O94874 794 aa20.75■□□□□ 0.91
LMNA-222ENST00000508500 ANKIB1Q9P2G1 1089 aa20.75■□□□□ 0.91
LMNA-222ENST00000508500 EGFRP00533 1210 aa20.74■□□□□ 0.91
LMNA-222ENST00000508500 HSPA8P11142 646 aaKnown RBP20.74■□□□□ 0.91
LMNA-222ENST00000508500 MICALL2Q8IY33 904 aa20.74■□□□□ 0.91
LMNA-222ENST00000508500 DPF2Q92785 391 aa20.74■□□□□ 0.91
LMNA-222ENST00000508500 PLA2G12BQ9BX93 195 aa20.74■□□□□ 0.91
LMNA-222ENST00000508500 GLIS2Q9BZE0 524 aaPredicted RBP20.74■□□□□ 0.91
LMNA-222ENST00000508500 ZC3H12CQ9C0D7 883 aaKnown RBP20.74■□□□□ 0.91
LMNA-222ENST00000508500 GGA1Q9UJY5 639 aa20.74■□□□□ 0.91
LMNA-222ENST00000508500 F6X3S4 739 aa20.73■□□□□ 0.91
LMNA-222ENST00000508500 LBX1P52954 281 aa20.73■□□□□ 0.91
LMNA-222ENST00000508500 SAMD7Q7Z3H4 446 aa20.73■□□□□ 0.91
LMNA-222ENST00000508500 LINS1Q8NG48 757 aa20.73■□□□□ 0.91
LMNA-222ENST00000508500 MINPP1Q9UNW1 487 aa20.73■□□□□ 0.91
LMNA-222ENST00000508500 XDHP47989 1333 aa20.73■□□□□ 0.91
LMNA-222ENST00000508500 CDC5LQ99459 802 aaKnown RBP20.72■□□□□ 0.91
LMNA-222ENST00000508500 BSDC1Q9NW68 430 aaPredicted RBP20.72■□□□□ 0.91
LMNA-222ENST00000508500 H7C1D1 291 aa20.71■□□□□ 0.91
LMNA-222ENST00000508500 CSF1RP07333 972 aa20.71■□□□□ 0.91
LMNA-222ENST00000508500 VIL1P09327 827 aaKnown RBP20.71■□□□□ 0.91
LMNA-222ENST00000508500 BEND3Q5T5X7 828 aa20.71■□□□□ 0.91
LMNA-222ENST00000508500 DLK2Q6UY11 383 aa20.71■□□□□ 0.91
LMNA-222ENST00000508500 ZC3H15Q8WU90 426 aaKnown RBP20.71■□□□□ 0.91
LMNA-222ENST00000508500 AIDAQ96BJ3 306 aa20.71■□□□□ 0.91
LMNA-222ENST00000508500 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
LMNA-222ENST00000508500 TLL2Q9Y6L7 1015 aa20.71■□□□□ 0.91
LMNA-222ENST00000508500 ATP2B4P23634 1241 aa20.7■□□□□ 0.9
LMNA-222ENST00000508500 MAP2K1Q02750 393 aaPredicted RBP20.7■□□□□ 0.9
LMNA-222ENST00000508500 TBC1D10BQ4KMP7 808 aaPredicted RBP20.7■□□□□ 0.9
LMNA-222ENST00000508500 CAPNS2Q96L46 248 aa20.7■□□□□ 0.9
LMNA-222ENST00000508500 ABT1Q9ULW3 272 aaKnown RBP20.7■□□□□ 0.9
LMNA-222ENST00000508500 RPS12P25398 132 aaKnown RBP20.69■□□□□ 0.9
LMNA-222ENST00000508500 FAM161AQ3B820 660 aa20.69■□□□□ 0.9
LMNA-222ENST00000508500 ITGA6P23229 1130 aa20.68■□□□□ 0.9
LMNA-222ENST00000508500 FOXO4P98177 505 aa20.68■□□□□ 0.9
LMNA-222ENST00000508500 ZNF609O15014 1411 aa20.68■□□□□ 0.9
LMNA-222ENST00000508500 CCT4P50991 539 aaKnown RBP20.67■□□□□ 0.9
LMNA-222ENST00000508500 RBM26Q5T8P6 1007 aaKnown RBP20.67■□□□□ 0.9
LMNA-222ENST00000508500 CYP4F22Q6NT55 531 aa20.67■□□□□ 0.9
LMNA-222ENST00000508500 SAPCD2Q86UD0 394 aa20.67■□□□□ 0.9
LMNA-222ENST00000508500 TXNRD3Q86VQ6 643 aa20.67■□□□□ 0.9
LMNA-222ENST00000508500 CELF2O95319 508 aaKnown RBP20.66■□□□□ 0.9
LMNA-222ENST00000508500 EPHA10Q5JZY3 1008 aa20.66■□□□□ 0.9
LMNA-222ENST00000508500 CDC37L1Q7L3B6 337 aa20.66■□□□□ 0.9
LMNA-222ENST00000508500 USP48Q86UV5 1035 aa20.66■□□□□ 0.9
LMNA-222ENST00000508500 GMLQ99445 158 aa20.66■□□□□ 0.9
LMNA-222ENST00000508500 MED23Q9ULK4 1368 aa20.66■□□□□ 0.9
LMNA-222ENST00000508500 ASTN2O75129 1339 aaPredicted RBP20.65■□□□□ 0.9
LMNA-222ENST00000508500 G3V3G9 751 aa20.65■□□□□ 0.9
LMNA-222ENST00000508500 DCAF8Q5TAQ9 597 aa20.65■□□□□ 0.9
LMNA-222ENST00000508500 RSBN1LQ6PCB5 846 aaPredicted RBP20.65■□□□□ 0.9
LMNA-222ENST00000508500 HHIPL1Q96JK4 782 aa20.65■□□□□ 0.9
LMNA-222ENST00000508500 KLRK1P26718 216 aa20.64■□□□□ 0.89
LMNA-222ENST00000508500 IGHMBP2P38935 993 aaKnown RBP20.64■□□□□ 0.89
LMNA-222ENST00000508500 ECE1P42892 770 aa20.64■□□□□ 0.89
LMNA-222ENST00000508500 PODNQ7Z5L7 613 aa20.64■□□□□ 0.89
LMNA-222ENST00000508500 ZNF280AP59817 542 aaPredicted RBP20.63■□□□□ 0.89
LMNA-222ENST00000508500 KIF4BQ2VIQ3 1234 aa20.63■□□□□ 0.89
LMNA-222ENST00000508500 AGBL3Q8NEM8 1001 aa20.63■□□□□ 0.89
LMNA-222ENST00000508500 IRS2Q9Y4H2 1338 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms