RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 RPAP1Q9BWH6 1393 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 DENND4BO75064 1496 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 RIMBP3CA6NJZ7 1639 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 RIMBP3BA6NNM3 1639 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 RIMBP3Q9UFD9 1639 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 LIN7AO14910 233 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 RAD21O60216 631 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 FCHSD2O94868 740 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 FSBPO95073 299 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 YY1P25490 414 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 CDC25BP30305 580 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 FLT3P36888 993 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 PTPN14Q15678 1187 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 TPD52L1Q16890 204 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 CCDC80Q76M96 950 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 ELOA2Q8IYF1 753 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 CCDC170Q8IYT3 715 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 B4GALNT2Q8NHY0 566 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 FUCA2Q9BTY2 467 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 ACBD3Q9H3P7 528 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 INCENPQ9NQS7 918 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 IFT57Q9NWB7 429 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 MBD5Q9P267 1494 aa12.46□□□□□ -0.41
PDLIM5-210ENST00000508216 CDR1P51861 262 aa12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 ROR2Q01974 943 aaKnown RBP12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 FOXD4Q12950 439 aaPredicted RBP12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 SLMAPQ14BN4 828 aa12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 PLCB4Q15147 1175 aa12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 PKN1Q16512 942 aa12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 CC2D1AQ6P1N0 951 aaPredicted RBP12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 APLFQ8IW19 511 aaPredicted RBP12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 PHC3Q8NDX5 983 aa12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 SPATA7Q9P0W8 599 aa12.46□□□□□ -0.42
PDLIM5-210ENST00000508216 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 KCNJ6P48051 423 aa12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 CLNS1AP54105 237 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 WDR78Q5VTH9 848 aa12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 CWF19L1Q69YN2 538 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 APBB1IPQ7Z5R6 666 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 SPATS2Q86XZ4 545 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 MRFAP1L1Q96HT8 127 aa12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 ATP8A1Q9Y2Q0 1164 aa12.45□□□□□ -0.42
PDLIM5-210ENST00000508216 CFAP74Q9C0B2 1584 aa12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 PRPF4BQ13523 1007 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 ARHGAP29Q52LW3 1261 aa12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 C16orf87Q6PH81 154 aa12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 TTLL7Q6ZT98 887 aa12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 ARHGAP22Q7Z5H3 698 aa12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 CEP112Q8N8E3 955 aa12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-210ENST00000508216 EFCAB8A8MWE9 144 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 SASH3O75995 380 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 ZBED6P86452 979 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 POSTNQ15063 836 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 ERCC6LQ2NKX8 1250 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 RRP12Q5JTH9 1297 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 STAG2Q8N3U4 1231 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 KCNN1Q92952 543 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 HOOK2Q96ED9 719 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 ALS2CR12Q96Q35 445 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 FUT8Q9BYC5 575 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 TSGA10Q9BZW7 698 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 IRF2BPLQ9H1B7 796 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 MMADHCQ9H3L0 296 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 WDR37Q9Y2I8 494 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 TCOF1Q13428 1488 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 SPDYE3A6NKU9 549 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 FNTAP49354 379 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 SLFN5Q08AF3 891 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 PABPC4Q13310 644 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 MTHFD1LQ6UB35 978 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 MICALCLQ6ZW33 695 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 ANKRD13BQ86YJ7 626 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 ZBTB10Q96DT7 871 aa12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 NSFL1CQ9UNZ2 370 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-210ENST00000508216 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■■□□□ 11.9
PDLIM5-210ENST00000508216 ARHGAP35Q9NRY4 1499 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 ERICH2A1L162 156 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 GOLGA6L10A6NI86 522 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 HMGB1P1B2RPK0 211 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 FERP16591 822 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 PTGS1P23219 599 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 GNAI1P63096 354 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 SNX1Q13596 522 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 MYSM1Q5VVJ2 828 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 FOXR1Q6PIV2 292 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 OTUD6AQ7L8S5 288 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 ARHGAP45Q92619 1136 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 JAKMIP2Q96AA8 810 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 ITGB1BP2Q9UKP3 347 aa12.42□□□□□ -0.42
PDLIM5-210ENST00000508216 TIMM44O43615 452 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 RPL13P26373 211 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms