RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SULF1Q8IWU6 871 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 DOCK3Q8IZD9 2030 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 USP38Q8NB14 1042 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 FAM161BQ96MY7 647 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 CDX2Q99626 313 aaPredicted RBP4.76□□□□□ -1.65
TCOF1-208ENST00000506063 PTPN18Q99952 460 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 BAHCC1Q9P281 2608 aa4.76□□□□□ -1.65
TCOF1-208ENST00000506063 SCAF8Q9UPN6 1271 aaKnown RBP4.76□□□□□ -1.65
TCOF1-208ENST00000506063 ROCK2O75116 1388 aaKnown RBP4.76□□□□□ -1.65
TCOF1-208ENST00000506063 NPHP1O15259 732 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 EVI5O60447 810 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 FARP2O94887 1054 aaPredicted RBP4.75□□□□□ -1.65
TCOF1-208ENST00000506063 A1BGP04217 495 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 GJB1P08034 283 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 MAGEA10P43363 369 aaPredicted RBP4.75□□□□□ -1.65
TCOF1-208ENST00000506063 PLEKHO1Q53GL0 409 aaPredicted RBP4.75□□□□□ -1.65
TCOF1-208ENST00000506063 RBM26Q5T8P6 1007 aaKnown RBP4.75□□□□□ -1.65
TCOF1-208ENST00000506063 ANGEL2Q5VTE6 544 aaKnown RBP4.75□□□□□ -1.65
TCOF1-208ENST00000506063 PRAMEF18Q5VWM3 479 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 AEBP1Q8IUX7 1158 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 ZNF496Q96IT1 587 aaPredicted RBP4.75□□□□□ -1.65
TCOF1-208ENST00000506063 CRAMP1Q96RY5 1269 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 ARHGAP39Q9C0H5 1083 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 KCNQ5Q9NR82 932 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 POLKQ9UBT6 870 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 ATP6V0A2Q9Y487 856 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 HEG1Q9ULI3 1381 aa4.75□□□□□ -1.65
TCOF1-208ENST00000506063 LTBP2Q14767 1821 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 SPTBN4Q9H254 2564 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 MANSC4A6NHS7 340 aaPredicted RBP4.74□□□□□ -1.65
TCOF1-208ENST00000506063 TCERG1O14776 1098 aaKnown RBP4.74□□□□□ -1.65
TCOF1-208ENST00000506063 STARD3NLO95772 234 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 CTGFP29279 349 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 GJA5P36382 358 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 ZNF280AP59817 542 aaPredicted RBP4.74□□□□□ -1.65
TCOF1-208ENST00000506063 AMOTQ4VCS5 1084 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 TPTE2Q6XPS3 522 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 DZIP3Q86Y13 1208 aaKnown RBP4.74□□□□□ -1.65
TCOF1-208ENST00000506063 CNKSR2Q8WXI2 1034 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 TESK2Q96S53 571 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 P2RX7Q99572 595 aaKnown RBP4.74□□□□□ -1.65
TCOF1-208ENST00000506063 LRFN3Q9BTN0 628 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 ZMYND8Q9ULU4 1186 aaPredicted RBP4.74□□□□□ -1.65
TCOF1-208ENST00000506063 DDX60LQ5H9U9 1706 aaKnown RBP4.74□□□□□ -1.65
TCOF1-208ENST00000506063 ZFHX4Q86UP3 3567 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 ZNF318Q5VUA4 2279 aa4.74□□□□□ -1.65
TCOF1-208ENST00000506063 TESPA1A2RU30 521 aaPredicted RBP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 RGL2O15211 777 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 PPM1GO15355 546 aaPredicted RBP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 RNMTO43148 476 aaKnown RBP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 RPS12P25398 132 aaKnown RBP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 PIP4K2AP48426 406 aaPredicted RBP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 MRE11P49959 708 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 INHBEP58166 350 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 SCARF1Q14162 830 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 NUTM1Q86Y26 1132 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 NKX2-3Q8TAU0 364 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 U2AF1L4Q8WU68 220 aaKnown RBP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 MYLIPQ8WY64 445 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 TTYH1Q9H313 450 aaPredicted RBP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 C11orf16Q9NQ32 467 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 FZD1Q9UP38 647 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 NIP7Q9Y221 180 aaKnown RBP eCLIP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 ZNF330Q9Y3S2 320 aaPredicted RBP4.73□□□□□ -1.65
TCOF1-208ENST00000506063 ECM29Q5VYK3 1845 aa4.73□□□□□ -1.65
TCOF1-208ENST00000506063 CFAP47Q6ZTR5 3102 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 FAM177BA6PVY3 158 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 VIL1P09327 827 aaKnown RBP4.72□□□□□ -1.65
TCOF1-208ENST00000506063 ZBTB48P10074 688 aaPredicted RBP4.72□□□□□ -1.65
TCOF1-208ENST00000506063 CCL5P13501 91 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 HLFQ16534 295 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 C1orf141Q5JVX7 400 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 SUPT20HQ8NEM7 779 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 ADAMTS19Q8TE59 1207 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 DIS3LQ8TF46 1054 aaKnown RBP4.72□□□□□ -1.65
TCOF1-208ENST00000506063 L3MBTL2Q969R5 705 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 WNK4Q96J92 1243 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 CLMNQ96JQ2 1002 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 GMLQ99445 158 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 CARD14Q9BXL6 1004 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 SEMA6BQ9H3T3 888 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 HCN4Q9Y3Q4 1203 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 CHD7Q9P2D1 2997 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 KMT2BQ9UMN6 2715 aaPredicted RBP4.72□□□□□ -1.65
TCOF1-208ENST00000506063 ABCC4O15439 1325 aa4.72□□□□□ -1.65
TCOF1-208ENST00000506063 MAST2Q6P0Q8 1798 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 IBTKQ9P2D0 1353 aaPredicted RBP4.71□□□□□ -1.66
TCOF1-208ENST00000506063 NBPF26B4DH59 902 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 ECM2O94769 699 aaPredicted RBP4.71□□□□□ -1.66
TCOF1-208ENST00000506063 SGPL1O95470 568 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 SYN1P17600 705 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 MAP3K11Q16584 847 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 ZNF697Q5TEC3 545 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 NBPF10Q6P3W6 841 aaKnown RBP4.71□□□□□ -1.66
TCOF1-208ENST00000506063 DPP8Q6V1X1 898 aaPredicted RBP4.71□□□□□ -1.66
TCOF1-208ENST00000506063 C7orf61Q8IZ16 206 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 RPGRQ92834 1020 aaKnown RBP4.71□□□□□ -1.66
TCOF1-208ENST00000506063 MS4A4AQ96JQ5 239 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 C1QTNF1Q9BXJ1 281 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 UBE2OQ9C0C9 1292 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms