RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 SAPCD2Q86UD0 394 aa27.73■■■□□ 2.03
RNF4-205ENST00000504224 DPF2Q92785 391 aa27.73■■■□□ 2.03
RNF4-205ENST00000504224 CCDC85AQ96PX6 553 aaPredicted RBP27.73■■■□□ 2.03
RNF4-205ENST00000504224 CWC25Q9NXE8 425 aaPredicted RBP27.73■■■□□ 2.03
RNF4-205ENST00000504224 AOC2O75106 756 aa27.72■■■□□ 2.03
RNF4-205ENST00000504224 CCDC152Q4G0S7 254 aa27.72■■■□□ 2.03
RNF4-205ENST00000504224 TBC1D10BQ4KMP7 808 aaPredicted RBP27.72■■■□□ 2.03
RNF4-205ENST00000504224 USP48Q86UV5 1035 aa27.72■■■□□ 2.03
RNF4-205ENST00000504224 ZC3H12CQ9C0D7 883 aaKnown RBP27.72■■■□□ 2.03
RNF4-205ENST00000504224 KCNQ5Q9NR82 932 aa27.72■■■□□ 2.03
RNF4-205ENST00000504224 ANKIB1Q9P2G1 1089 aa27.72■■■□□ 2.03
RNF4-205ENST00000504224 ZNF316A6NFI3 1004 aaPredicted RBP27.71■■■□□ 2.03
RNF4-205ENST00000504224 UFL1O94874 794 aa27.71■■■□□ 2.03
RNF4-205ENST00000504224 PCCAP05165 728 aaPredicted RBP27.71■■■□□ 2.03
RNF4-205ENST00000504224 RBM26Q5T8P6 1007 aaKnown RBP27.71■■■□□ 2.03
RNF4-205ENST00000504224 METTL22Q9BUU2 404 aaPredicted RBP27.71■■■□□ 2.03
RNF4-205ENST00000504224 CHMP4AQ9BY43 222 aa27.71■■■□□ 2.03
RNF4-205ENST00000504224 PDE8AO60658 829 aa27.7■■■□□ 2.02
RNF4-205ENST00000504224 RPS12P25398 132 aaKnown RBP27.69■■■□□ 2.02
RNF4-205ENST00000504224 GGA1Q9UJY5 639 aa27.69■■■□□ 2.02
RNF4-205ENST00000504224 MAP3K2Q9Y2U5 619 aa27.69■■■□□ 2.02
RNF4-205ENST00000504224 MAP2K2P36507 400 aa27.68■■■□□ 2.02
RNF4-205ENST00000504224 TSPYL6Q8N831 410 aa27.68■■■□□ 2.02
RNF4-205ENST00000504224 PODXL2Q9NZ53 605 aa27.68■■■□□ 2.02
RNF4-205ENST00000504224 RTL9Q8NET4 1388 aa27.68■■■□□ 2.02
RNF4-205ENST00000504224 THSD7BQ9C0I4 1608 aa27.67■■■□□ 2.02
RNF4-205ENST00000504224 DLK2Q6UY11 383 aa27.67■■■□□ 2.02
RNF4-205ENST00000504224 TSR2Q969E8 191 aaKnown RBP27.67■■■□□ 2.02
RNF4-205ENST00000504224 EGFRP00533 1210 aa27.66■■■□□ 2.02
RNF4-205ENST00000504224 KRT26Q7Z3Y9 468 aa27.66■■■□□ 2.02
RNF4-205ENST00000504224 ANKRD18AQ8IVF6 992 aa27.66■■■□□ 2.02
RNF4-205ENST00000504224 TSKSQ9UJT2 592 aa27.66■■■□□ 2.02
RNF4-205ENST00000504224 DCPSQ96C86 337 aaKnown RBP27.65■■■□□ 2.02
RNF4-205ENST00000504224 HHIPL1Q96JK4 782 aa27.65■■■□□ 2.02
RNF4-205ENST00000504224 STK31Q9BXU1 1019 aa27.65■■■□□ 2.02
RNF4-205ENST00000504224 PI4KAP2A4QPH2 592 aa27.63■■■□□ 2.01
RNF4-205ENST00000504224 VIL1P09327 827 aaKnown RBP27.63■■■□□ 2.01
RNF4-205ENST00000504224 HUNKP57058 714 aa27.63■■■□□ 2.01
RNF4-205ENST00000504224 KIF4BQ2VIQ3 1234 aa27.63■■■□□ 2.01
RNF4-205ENST00000504224 CCDC184Q52MB2 194 aa27.63■■■□□ 2.01
RNF4-205ENST00000504224 KSR2Q6VAB6 950 aa27.63■■■□□ 2.01
RNF4-205ENST00000504224 PI4KAP1Q8N8J0 262 aa27.63■■■□□ 2.01
RNF4-205ENST00000504224 ADM5C9JUS6 153 aa27.62■■■□□ 2.01
RNF4-205ENST00000504224 NEXNQ0ZGT2 675 aa27.62■■■□□ 2.01
RNF4-205ENST00000504224 XDHP47989 1333 aa27.62■■■□□ 2.01
RNF4-205ENST00000504224 CTSWP56202 376 aa27.61■■■□□ 2.01
RNF4-205ENST00000504224 ABHD8Q96I13 439 aa27.61■■■□□ 2.01
RNF4-205ENST00000504224 IGKV5-2P06315 115 aa27.6■■■□□ 2.01
RNF4-205ENST00000504224 CDC5LQ99459 802 aaKnown RBP27.6■■■□□ 2.01
RNF4-205ENST00000504224 BRPF1P55201 1214 aaPredicted RBP27.59■■■□□ 2.01
RNF4-205ENST00000504224 TWISTNBQ3B726 338 aaPredicted RBP27.59■■■□□ 2.01
RNF4-205ENST00000504224 C2orf69Q8N8R5 385 aa27.59■■■□□ 2.01
RNF4-205ENST00000504224 GBA2Q9HCG7 927 aaPredicted RBP27.59■■■□□ 2.01
RNF4-205ENST00000504224 GGA3Q9NZ52 723 aa27.59■■■□□ 2.01
RNF4-205ENST00000504224 CA12O43570 354 aa27.58■■■□□ 2.01
RNF4-205ENST00000504224 ATP2B4P23634 1241 aa27.58■■■□□ 2.01
RNF4-205ENST00000504224 CWF19L2Q2TBE0 894 aaKnown RBP27.58■■■□□ 2.01
RNF4-205ENST00000504224 SULF1Q8IWU6 871 aa27.58■■■□□ 2.01
RNF4-205ENST00000504224 WWC1Q8IX03 1113 aa27.58■■■□□ 2.01
RNF4-205ENST00000504224 NOGQ13253 232 aa27.57■■■□□ 2
RNF4-205ENST00000504224 CCDC27Q2M243 656 aa27.57■■■□□ 2
RNF4-205ENST00000504224 RSBN1LQ6PCB5 846 aaPredicted RBP27.57■■■□□ 2
RNF4-205ENST00000504224 SLC4A2P04920 1241 aa27.56■■■□□ 2
RNF4-205ENST00000504224 G2E3Q7L622 706 aa27.56■■■□□ 2
RNF4-205ENST00000504224 AGBL3Q8NEM8 1001 aa27.56■■■□□ 2
RNF4-205ENST00000504224 TTLL11Q8NHH1 800 aa27.56■■■□□ 2
RNF4-205ENST00000504224 GREM2Q9H772 168 aa27.56■■■□□ 2
RNF4-205ENST00000504224 ASTN2O75129 1339 aaPredicted RBP27.56■■■□□ 2
RNF4-205ENST00000504224 SCN9AQ15858 1988 aa27.55■■■□□ 2
RNF4-205ENST00000504224 NEURL1BA8MQ27 555 aa27.55■■■□□ 2
RNF4-205ENST00000504224 ANP32CO43423 234 aa27.55■■■□□ 2
RNF4-205ENST00000504224 ZIC5Q96T25 663 aa27.55■■■□□ 2
RNF4-205ENST00000504224 RGMBQ6NW40 437 aa27.54■■■□□ 2
RNF4-205ENST00000504224 UBE3BQ7Z3V4 1068 aa27.54■■■□□ 2
RNF4-205ENST00000504224 USP17L3A6NCW0 530 aa27.53■■■□□ 2
RNF4-205ENST00000504224 USP17L4A6NCW7 530 aa27.53■■■□□ 2
RNF4-205ENST00000504224 ZNF280AP59817 542 aaPredicted RBP27.53■■■□□ 2
RNF4-205ENST00000504224 USP17L1Q7RTZ2 530 aa27.53■■■□□ 2
RNF4-205ENST00000504224 BSDC1Q9NW68 430 aaPredicted RBP27.53■■■□□ 2
RNF4-205ENST00000504224 MINPP1Q9UNW1 487 aa27.53■■■□□ 2
RNF4-205ENST00000504224 WTIPA6NIX2 430 aaPredicted RBP27.52■■■□□ 2
RNF4-205ENST00000504224 SCARF1Q14162 830 aa27.52■■■□□ 2
RNF4-205ENST00000504224 ANGEL2Q5VTE6 544 aaKnown RBP27.52■■■□□ 2
RNF4-205ENST00000504224 PODNQ7Z5L7 613 aa27.52■■■□□ 2
RNF4-205ENST00000504224 USP17L8P0C7I0 530 aa27.51■■□□□ 1.99
RNF4-205ENST00000504224 ZNF157P51786 506 aaPredicted RBP27.51■■□□□ 1.99
RNF4-205ENST00000504224 FBXW7Q969H0 707 aa27.51■■□□□ 1.99
RNF4-205ENST00000504224 CDCA5Q96FF9 252 aa27.51■■□□□ 1.99
RNF4-205ENST00000504224 IL16Q14005 1332 aa27.5■■□□□ 1.99
RNF4-205ENST00000504224 CCDC85CA6NKD9 419 aa27.5■■□□□ 1.99
RNF4-205ENST00000504224 IGHMBP2P38935 993 aaKnown RBP27.5■■□□□ 1.99
RNF4-205ENST00000504224 CCDC102AQ96A19 550 aa27.5■■□□□ 1.99
RNF4-205ENST00000504224 MRS2Q9HD23 443 aa27.5■■□□□ 1.99
RNF4-205ENST00000504224 MYOZ2Q9NPC6 264 aa27.5■■□□□ 1.99
RNF4-205ENST00000504224 SALL2Q9Y467 1007 aaPredicted RBP27.5■■□□□ 1.99
RNF4-205ENST00000504224 POLR2AP24928 1970 aaKnown RBP27.49■■□□□ 1.99
RNF4-205ENST00000504224 H7C1W4 665 aa27.49■■□□□ 1.99
RNF4-205ENST00000504224 CCT4P50991 539 aaKnown RBP27.49■■□□□ 1.99
RNF4-205ENST00000504224 FLIIQ13045 1269 aa27.49■■□□□ 1.99
RNF4-205ENST00000504224 GMLQ99445 158 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms