RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 USP48Q86UV5 1035 aa18.33■□□□□ 0.52
POLR2J3-207ENST00000503564 EYA3Q99504 573 aa18.33■□□□□ 0.52
POLR2J3-207ENST00000503564 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
POLR2J3-207ENST00000503564 PODXL2Q9NZ53 605 aa18.33■□□□□ 0.52
POLR2J3-207ENST00000503564 CASP8AP2Q9UKL3 1982 aa18.33■□□□□ 0.52
POLR2J3-207ENST00000503564 MYH3P11055 1940 aa18.33■□□□□ 0.52
POLR2J3-207ENST00000503564 APAF1O14727 1248 aa18.32■□□□□ 0.52
POLR2J3-207ENST00000503564 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
POLR2J3-207ENST00000503564 DOK7Q18PE1 504 aa18.32■□□□□ 0.52
POLR2J3-207ENST00000503564 TBC1D10BQ4KMP7 808 aaPredicted RBP18.32■□□□□ 0.52
POLR2J3-207ENST00000503564 MYD88Q99836 296 aa18.32■□□□□ 0.52
POLR2J3-207ENST00000503564 ZNF646O15015 1829 aaPredicted RBP18.31■□□□□ 0.52
POLR2J3-207ENST00000503564 SPEF2Q9C093 1822 aa18.31■□□□□ 0.52
POLR2J3-207ENST00000503564 GNAI1P63096 354 aa18.31■□□□□ 0.52
POLR2J3-207ENST00000503564 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
POLR2J3-207ENST00000503564 CA12O43570 354 aa18.3■□□□□ 0.52
POLR2J3-207ENST00000503564 PCCAP05165 728 aaPredicted RBP18.3■□□□□ 0.52
POLR2J3-207ENST00000503564 KRT26Q7Z3Y9 468 aa18.3■□□□□ 0.52
POLR2J3-207ENST00000503564 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
POLR2J3-207ENST00000503564 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
POLR2J3-207ENST00000503564 ZIC5Q96T25 663 aa18.3■□□□□ 0.52
POLR2J3-207ENST00000503564 ADM5C9JUS6 153 aa18.29■□□□□ 0.52
POLR2J3-207ENST00000503564 UFL1O94874 794 aa18.29■□□□□ 0.52
POLR2J3-207ENST00000503564 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
POLR2J3-207ENST00000503564 HUNKP57058 714 aa18.29■□□□□ 0.52
POLR2J3-207ENST00000503564 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
POLR2J3-207ENST00000503564 PDE8AO60658 829 aa18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 NOGQ13253 232 aa18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 KIF4BQ2VIQ3 1234 aa18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 CCDC152Q4G0S7 254 aa18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 ZC3H12CQ9C0D7 883 aaKnown RBP18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 GBA2Q9HCG7 927 aaPredicted RBP18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 CWC25Q9NXE8 425 aaPredicted RBP18.28■□□□□ 0.52
POLR2J3-207ENST00000503564 FAM155AB1AL88 458 aaPredicted RBP18.27■□□□□ 0.52
POLR2J3-207ENST00000503564 RBM26Q5T8P6 1007 aaKnown RBP18.27■□□□□ 0.52
POLR2J3-207ENST00000503564 JARID2Q92833 1246 aaPredicted RBP18.27■□□□□ 0.52
POLR2J3-207ENST00000503564 ANKIB1Q9P2G1 1089 aa18.27■□□□□ 0.52
POLR2J3-207ENST00000503564 GGA1Q9UJY5 639 aa18.27■□□□□ 0.52
POLR2J3-207ENST00000503564 ASTN2O75129 1339 aaPredicted RBP18.26■□□□□ 0.51
POLR2J3-207ENST00000503564 DCPSQ96C86 337 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-207ENST00000503564 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
POLR2J3-207ENST00000503564 GGA3Q9NZ52 723 aa18.26■□□□□ 0.51
POLR2J3-207ENST00000503564 ZNF280AP59817 542 aaPredicted RBP18.25■□□□□ 0.51
POLR2J3-207ENST00000503564 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
POLR2J3-207ENST00000503564 RGMBQ6NW40 437 aa18.25■□□□□ 0.51
POLR2J3-207ENST00000503564 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
POLR2J3-207ENST00000503564 AKAP11Q9UKA4 1901 aa18.25■□□□□ 0.51
POLR2J3-207ENST00000503564 XDHP47989 1333 aa18.24■□□□□ 0.51
POLR2J3-207ENST00000503564 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
POLR2J3-207ENST00000503564 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
POLR2J3-207ENST00000503564 RSBN1LQ6PCB5 846 aaPredicted RBP18.24■□□□□ 0.51
POLR2J3-207ENST00000503564 MCOLN1Q9GZU1 580 aa18.24■□□□□ 0.51
POLR2J3-207ENST00000503564 MAP3K2Q9Y2U5 619 aa18.24■□□□□ 0.51
POLR2J3-207ENST00000503564 PAPPA2Q9BXP8 1791 aa18.24■□□□□ 0.51
POLR2J3-207ENST00000503564 CTSWP56202 376 aa18.23■□□□□ 0.51
POLR2J3-207ENST00000503564 FAM161AQ3B820 660 aa18.23■□□□□ 0.51
POLR2J3-207ENST00000503564 ANKRD18AQ8IVF6 992 aa18.23■□□□□ 0.51
POLR2J3-207ENST00000503564 C2orf69Q8N8R5 385 aa18.23■□□□□ 0.51
POLR2J3-207ENST00000503564 AGBL3Q8NEM8 1001 aa18.23■□□□□ 0.51
POLR2J3-207ENST00000503564 GMLQ99445 158 aa18.23■□□□□ 0.51
POLR2J3-207ENST00000503564 CCDC85CA6NKD9 419 aa18.22■□□□□ 0.51
POLR2J3-207ENST00000503564 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
POLR2J3-207ENST00000503564 SULF1Q8IWU6 871 aa18.22■□□□□ 0.51
POLR2J3-207ENST00000503564 MED23Q9ULK4 1368 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 G3V3G9 751 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 ATP2B4P23634 1241 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 DCAF8Q5TAQ9 597 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 TTLL11Q8NHH1 800 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 CDCA5Q96FF9 252 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 CHMP4AQ9BY43 222 aa18.21■□□□□ 0.51
POLR2J3-207ENST00000503564 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 SLC10A3P09131 477 aa18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 RGS19P49795 217 aa18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 SCARF1Q14162 830 aa18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 ANGEL2Q5VTE6 544 aaKnown RBP18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 PODNQ7Z5L7 613 aa18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 CCDC102AQ96A19 550 aa18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 GREM2Q9H772 168 aa18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 SAGE1Q9NXZ1 904 aa18.2■□□□□ 0.5
POLR2J3-207ENST00000503564 CACNA1FO60840 1977 aa18.19■□□□□ 0.5
POLR2J3-207ENST00000503564 ZNF157P51786 506 aaPredicted RBP18.19■□□□□ 0.5
POLR2J3-207ENST00000503564 KIF23Q02241 960 aaPredicted RBP18.19■□□□□ 0.5
POLR2J3-207ENST00000503564 CWF19L2Q2TBE0 894 aaKnown RBP18.19■□□□□ 0.5
POLR2J3-207ENST00000503564 MYOZ2Q9NPC6 264 aa18.19■□□□□ 0.5
POLR2J3-207ENST00000503564 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
POLR2J3-207ENST00000503564 A0A1B0GUL6 1792 aa18.19■□□□□ 0.5
POLR2J3-207ENST00000503564 PITPNM2Q9BZ72 1349 aa18.19■□□□□ 0.5
POLR2J3-207ENST00000503564 USP17L3A6NCW0 530 aa18.18■□□□□ 0.5
POLR2J3-207ENST00000503564 USP17L4A6NCW7 530 aa18.18■□□□□ 0.5
POLR2J3-207ENST00000503564 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
POLR2J3-207ENST00000503564 USP17L8P0C7I0 530 aa18.18■□□□□ 0.5
POLR2J3-207ENST00000503564 DGKZQ13574 1117 aa18.18■□□□□ 0.5
POLR2J3-207ENST00000503564 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
POLR2J3-207ENST00000503564 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms