RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 INO80Q9ULG1 1556 aaPredicted RBP15.4■□□□□ 0.06
SPCS3-201ENST00000503362 MED14O60244 1454 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 CNNM3Q8NE01 707 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 WASF1Q92558 559 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
SPCS3-201ENST00000503362 ABCA9Q8IUA7 1624 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 ALKQ9UM73 1620 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 RAD21O60216 631 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 GSDMDP57764 484 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 GCKRQ14397 625 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 ANKRD18BA2A2Z9 1011 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
SPCS3-201ENST00000503362 PROSER3Q2NL68 480 aa15.4■□□□□ 0.06
SPCS3-201ENST00000503362 ZNF500O60304 480 aaPredicted RBP15.39■□□□□ 0.06
SPCS3-201ENST00000503362 TOP1P11387 765 aaKnown RBP15.39■□□□□ 0.06
SPCS3-201ENST00000503362 METAP2P50579 478 aaKnown RBP eCLIP15.39■□□□□ 0.06
SPCS3-201ENST00000503362 KLHL10Q6JEL2 608 aa15.39■□□□□ 0.06
SPCS3-201ENST00000503362 LEO1Q8WVC0 666 aaPredicted RBP15.39■□□□□ 0.06
SPCS3-201ENST00000503362 TPCN1Q9ULQ1 816 aa15.39■□□□□ 0.06
SPCS3-201ENST00000503362 NCOA5Q9HCD5 579 aaKnown RBP15.39■□□□□ 0.05
SPCS3-201ENST00000503362 KIAA1210Q9ULL0 1709 aa15.39■□□□□ 0.05
SPCS3-201ENST00000503362 URI1O94763 535 aaPredicted RBP15.39■□□□□ 0.05
SPCS3-201ENST00000503362 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
SPCS3-201ENST00000503362 ZNF496Q96IT1 587 aaPredicted RBP15.39■□□□□ 0.05
SPCS3-201ENST00000503362 MAP3K12Q12852 859 aa15.39■□□□□ 0.05
SPCS3-201ENST00000503362 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
SPCS3-201ENST00000503362 G3V3G9 751 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 PRC1O43663 620 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 TMEM67Q5HYA8 995 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 SMARCE1Q969G3 411 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 DCAF5Q96JK2 942 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 RNF113AO15541 343 aaKnown RBP15.38■□□□□ 0.05
SPCS3-201ENST00000503362 A2ML1A8K2U0 1454 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 LIG1P18858 919 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 TXLNAP40222 546 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 KCNG4Q8TDN1 519 aa15.38■□□□□ 0.05
SPCS3-201ENST00000503362 ZFYP08048 801 aaPredicted RBP15.37■□□□□ 0.05
SPCS3-201ENST00000503362 ATP2B3Q16720 1220 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 CCDC70Q6NSX1 233 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 ZCRB1Q8TBF4 217 aaKnown RBP15.37■□□□□ 0.05
SPCS3-201ENST00000503362 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 ZDHHC9Q9Y397 364 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 PAXBP1Q9Y5B6 917 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 IGHMBP2P38935 993 aaKnown RBP15.37■□□□□ 0.05
SPCS3-201ENST00000503362 SYKP43405 635 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 SNW1Q13573 536 aaKnown RBP15.37■□□□□ 0.05
SPCS3-201ENST00000503362 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
SPCS3-201ENST00000503362 HSP90B2PQ58FF3 399 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 TSC1Q92574 1164 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 ALG1Q9BT22 464 aa15.37■□□□□ 0.05
SPCS3-201ENST00000503362 PTPRMP28827 1452 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 NRXN1Q9ULB1 1477 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 SSRP1Q08945 709 aaKnown RBP15.36■□□□□ 0.05
SPCS3-201ENST00000503362 HSP90AA4PQ58FG1 418 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 TTC6Q86TZ1 520 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 SLC26A6Q9BXS9 759 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 CGNQ9P2M7 1197 aaKnown RBP15.36■□□□□ 0.05
SPCS3-201ENST00000503362 SPTLC2O15270 562 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 SLC9C2Q5TAH2 1124 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.36■□□□□ 0.05
SPCS3-201ENST00000503362 V9GYY5 206 aaPredicted RBP15.36■□□□□ 0.05
SPCS3-201ENST00000503362 A0A1B0GVL5 298 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 LMOD1P29536 600 aaPredicted RBP15.36■□□□□ 0.05
SPCS3-201ENST00000503362 PRAMEF22A3QJZ6 481 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 TERF1P54274 439 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 SEC62Q99442 399 aaKnown RBP15.36■□□□□ 0.05
SPCS3-201ENST00000503362 CLSTN2Q9H4D0 955 aa15.36■□□□□ 0.05
SPCS3-201ENST00000503362 ZHX1Q9UKY1 873 aaPredicted RBP15.36■□□□□ 0.05
SPCS3-201ENST00000503362 ARHGEF40Q8TER5 1519 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 ADGRB1O14514 1584 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 ZNF594Q96JF6 807 aaPredicted RBP15.35■□□□□ 0.05
SPCS3-201ENST00000503362 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 CCDC102BQ68D86 513 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 PI4K2BQ8TCG2 481 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 CCDC196A0A1B0GTZ2 297 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 KBTBD3Q8NAB2 608 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 TMX1Q9H3N1 280 aa15.35■□□□□ 0.05
SPCS3-201ENST00000503362 TLR7Q9NYK1 1049 aaKnown RBP15.35■□□□□ 0.05
SPCS3-201ENST00000503362 LARGE1O95461 756 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 OTUD7BQ6GQQ9 843 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 TMX4Q9H1E5 349 aaPredicted RBP15.34■□□□□ 0.05
SPCS3-201ENST00000503362 CCDC66A2RUB6 948 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 ZSCAN12O43309 604 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 CLSTN1O94985 981 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 RXRAP19793 462 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 TTF1Q15361 905 aaPredicted RBP15.34■□□□□ 0.05
SPCS3-201ENST00000503362 CEP131Q9UPN4 1083 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 KDRP35968 1356 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 ZBTB43O43298 467 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 SLC5A1P13866 664 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 CLEC17AQ6ZS10 378 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 MYRIPQ8NFW9 859 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 CPLX3Q8WVH0 158 aa15.34■□□□□ 0.05
SPCS3-201ENST00000503362 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.05
SPCS3-201ENST00000503362 RANBP6O60518 1105 aaKnown RBP15.33■□□□□ 0.05
SPCS3-201ENST00000503362 ATP5JP18859 108 aa15.33■□□□□ 0.05
SPCS3-201ENST00000503362 PLBD2Q8NHP8 589 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms