RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 GTF3C6Q969F1 213 aa23.28■■□□□ 1.32
NKX2-1-202ENST00000498187 HAUS7Q99871 368 aa23.28■■□□□ 1.32
NKX2-1-202ENST00000498187 TFIP11Q9UBB9 837 aaKnown RBP23.28■■□□□ 1.32
NKX2-1-202ENST00000498187 MRVI1Q9Y6F6 885 aa23.28■■□□□ 1.32
NKX2-1-202ENST00000498187 U3KPZ7 1027 aaPredicted RBP23.28■■□□□ 1.32
NKX2-1-202ENST00000498187 TMEM94Q12767 1356 aa23.28■■□□□ 1.32
NKX2-1-202ENST00000498187 SPATA32Q96LK8 384 aa23.28■■□□□ 1.32
NKX2-1-202ENST00000498187 BCL2L12Q9HB09 334 aa23.28■■□□□ 1.32
NKX2-1-202ENST00000498187 JAK2O60674 1132 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 CASP7P55210 303 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 CAMK4Q16566 473 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 MCMDC2Q4G0Z9 681 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 DDX46Q7L014 1031 aaKnown RBP23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 CABLES1Q8TDN4 633 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 TNMDQ9H2S6 317 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 CABP4P57796 275 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 CHRNA2Q15822 529 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 Q6ZUG5 572 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 PLBD2Q8NHP8 589 aa23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 DDX19AQ9NUU7 478 aaKnown RBP23.27■■□□□ 1.32
NKX2-1-202ENST00000498187 CYP21A2P08686 494 aa23.26■■□□□ 1.31
NKX2-1-202ENST00000498187 LMBR1LQ6UX01 489 aa23.26■■□□□ 1.31
NKX2-1-202ENST00000498187 CCDC9Q9Y3X0 531 aaKnown RBP23.26■■□□□ 1.31
NKX2-1-202ENST00000498187 PKD1L3Q7Z443 1732 aa23.26■■□□□ 1.31
NKX2-1-202ENST00000498187 STRCP1A6NGW2 1772 aa23.26■■□□□ 1.31
NKX2-1-202ENST00000498187 HSP90B1P14625 803 aaKnown RBP23.26■■□□□ 1.31
NKX2-1-202ENST00000498187 LEO1Q8WVC0 666 aaPredicted RBP23.26■■□□□ 1.31
NKX2-1-202ENST00000498187 LAMB4A4D0S4 1761 aa23.25■■□□□ 1.31
NKX2-1-202ENST00000498187 DACT1Q9NYF0 836 aa23.25■■□□□ 1.31
NKX2-1-202ENST00000498187 RIOK3O14730 519 aaKnown RBP23.25■■□□□ 1.31
NKX2-1-202ENST00000498187 CADPS2Q86UW7 1296 aa23.25■■□□□ 1.31
NKX2-1-202ENST00000498187 GLI3P10071 1580 aa23.24■■□□□ 1.31
NKX2-1-202ENST00000498187 LUZP1Q86V48 1076 aa23.24■■□□□ 1.31
NKX2-1-202ENST00000498187 BRF1Q92994 677 aa23.24■■□□□ 1.31
NKX2-1-202ENST00000498187 PPP4R3BQ5MIZ7 849 aa23.24■■□□□ 1.31
NKX2-1-202ENST00000498187 KBTBD3Q8NAB2 608 aa23.24■■□□□ 1.31
NKX2-1-202ENST00000498187 PTGS1P23219 599 aa23.23■■□□□ 1.31
NKX2-1-202ENST00000498187 FOXO4P98177 505 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 ANO6Q4KMQ2 910 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 UTP14CQ5TAP6 766 aaKnown RBP23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 RBM43Q6ZSC3 357 aaKnown RBP23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 CKAP2LQ8IYA6 745 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 LRRC2Q9BYS8 371 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 CBX8Q9HC52 389 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 SH3TC1Q8TE82 1336 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 RESTQ13127 1097 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 PDCL2Q8N4E4 241 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 CLSTN2Q9H4D0 955 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 LAMA4Q16363 1823 aa23.22■■□□□ 1.31
NKX2-1-202ENST00000498187 FAM177BA6PVY3 158 aa23.21■■□□□ 1.31
NKX2-1-202ENST00000498187 CTIFO43310 598 aaKnown RBP23.21■■□□□ 1.31
NKX2-1-202ENST00000498187 STOX1Q6ZVD7 989 aa23.21■■□□□ 1.31
NKX2-1-202ENST00000498187 DRC7Q8IY82 874 aa23.21■■□□□ 1.31
NKX2-1-202ENST00000498187 DDX11Q96FC9 970 aa23.21■■□□□ 1.31
NKX2-1-202ENST00000498187 NEUROD6Q96NK8 337 aa23.21■■□□□ 1.31
NKX2-1-202ENST00000498187 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
NKX2-1-202ENST00000498187 CCDC186Q7Z3E2 898 aa23.21■■□□□ 1.31
NKX2-1-202ENST00000498187 PALLDQ8WX93 1383 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 NBPF26B4DH59 902 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 H3BQV1 296 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 H7C1W4 665 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 GOLIM4O00461 696 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 FGD1P98174 961 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 SCRN1Q12765 414 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 IFFO2Q5TF58 517 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 NBPF14Q5TI25 921 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 NBPF10Q6P3W6 841 aaKnown RBP23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 ATG9AQ7Z3C6 839 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 NBPF15Q8N660 670 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 PGBD1Q96JS3 809 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 DMTNQ08495 405 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 SLFNL1Q499Z3 407 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 TDRD7Q8NHU6 1098 aaKnown RBP23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 ANKRD7Q92527 254 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 TRIM5Q9C035 493 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 PRDM10Q9NQV6 1147 aa23.2■■□□□ 1.3
NKX2-1-202ENST00000498187 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
NKX2-1-202ENST00000498187 CAVIN2O95810 425 aa23.19■■□□□ 1.3
NKX2-1-202ENST00000498187 BICD2Q8TD16 824 aa23.19■■□□□ 1.3
NKX2-1-202ENST00000498187 PAG1Q9NWQ8 432 aa23.19■■□□□ 1.3
NKX2-1-202ENST00000498187 PODXL2Q9NZ53 605 aa23.19■■□□□ 1.3
NKX2-1-202ENST00000498187 PLA2G4DQ86XP0 818 aa23.19■■□□□ 1.3
NKX2-1-202ENST00000498187 NR1I2O75469 434 aa23.18■■□□□ 1.3
NKX2-1-202ENST00000498187 ZSCAN20P17040 1043 aaPredicted RBP23.18■■□□□ 1.3
NKX2-1-202ENST00000498187 ZNF75DP51815 510 aa23.18■■□□□ 1.3
NKX2-1-202ENST00000498187 PARP4Q9UKK3 1724 aaKnown RBP23.18■■□□□ 1.3
NKX2-1-202ENST00000498187 HMGB1P09429 215 aaKnown RBP23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 TIMM10P62072 90 aa23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 CBX1P83916 185 aa23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 TTLL7Q6ZT98 887 aa23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 SMARCC2Q8TAQ2 1214 aa23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 ZSCAN16Q9H4T2 348 aaPredicted RBP23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 HELLSQ9NRZ9 838 aa23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 CWC25Q9NXE8 425 aaPredicted RBP23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 PFKFB2O60825 505 aa23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 DHX32Q7L7V1 743 aaKnown RBP23.17■■□□□ 1.3
NKX2-1-202ENST00000498187 TJP1Q07157 1748 aa23.16■■□□□ 1.3
NKX2-1-202ENST00000498187 NUP188Q5SRE5 1749 aa23.16■■□□□ 1.3
NKX2-1-202ENST00000498187 ZNF165P49910 485 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms